Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CEP63 Sequence: fasta or formatted (495aa) NCBI GI: 109255226
Description:

centrosomal protein 63 isoform c

Referenced in:

Centrosome

Other entries for this name:
alt prot [475aa] centrosomal protein 63 isoform d
alt prot [541aa] centrosomal protein 63 isoform b
alt prot [703aa] centrosomal protein 63 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         29           2
 C cysteine            1.2          6           1
 D aspartate           2.2         11           1
 E glutamate          16.8         83           4
 F phenylalanine       1.0          5           1
 G glycine             2.8         14           3
 H histidine           4.0         20           2
 I isoleucine          5.3         26           2
 K lysine             10.1         50           2
 L leucine            12.9         64           2
 M methionine          3.4         17           1
 N asparagine          2.4         12           2
 P proline             0.4          2           1
 Q glutamine           8.7         43           3
 R arginine            6.1         30           1
 S serine              7.7         38           3
 T threonine           4.0         20           1
 V valine              3.4         17           1
 W tryptophan          0.4          2           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 63 isoform c 
CEP63                 0.976   centrosomal protein 63 isoform b 
CEP63                 0.892   centrosomal protein 63 isoform d 
CEP63                 0.868   centrosomal protein 63 isoform a 
CCDC67                0.213   coiled-coil domain containing 67 
MYH9                  0.078   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
GOLGA4                0.076   golgi autoantigen, golgin subfamily a, 4 
CCDC18                0.076   sarcoma antigen NY-SAR-41 
CGNL1                 0.076   cingulin-like 1 
NUMA1                 0.071   nuclear mitotic apparatus protein 1 
FAM184A               0.071   hypothetical protein LOC79632 isoform 2 
FAM184A               0.071   hypothetical protein LOC79632 isoform 1 
MYH10                 0.071   myosin, heavy polypeptide 10, non-muscle 
LOC440243             0.068   PREDICTED: Putative golgin subfamily A member 6-lik...
EEA1                  0.068   early endosome antigen 1, 162kD 
LOC283767             0.067   golgi autoantigen, golgin subfamily a-like 
CEP250                0.067   centrosomal protein 2 
CCDC88A               0.067   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.067   coiled-coil domain containing 88A isoform 1 
LOC283685             0.064   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGA3                0.064   Golgi autoantigen, golgin subfamily a, 3 
LOC727832             0.063   golgi autoantigen, golgin subfamily a-like 
CCDC158               0.063   coiled-coil domain containing 158 
CENPF                 0.063   centromere protein F 
KTN1                  0.062   kinectin 1 isoform c 
MYH7                  0.062   myosin, heavy chain 7, cardiac muscle, beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press