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Search of human proteins with 42476337
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo
sapiens]
(330 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 660 0.0
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 608 e-174
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 591 e-169
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 576 e-164
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 527 e-150
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens] 152 4e-37
gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens] 144 1e-34
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens] 100 2e-21
gi|239758137 PREDICTED: hypothetical protein [Homo sapiens] 65 1e-10
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 62 5e-10
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 62 5e-10
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 52 1e-06
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 49 6e-06
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 49 6e-06
gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens] 46 5e-05
gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens] 45 7e-05
gi|13376109 hypothetical protein LOC79823 [Homo sapiens] 43 3e-04
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 41 0.002
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 40 0.002
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 38 0.014
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 35 0.092
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 35 0.092
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 35 0.092
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 34 0.21
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 33 0.46
gi|239756584 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|239751076 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|239745563 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|16306530 cadherin 10, type 2 preproprotein [Homo sapiens] 30 2.3
gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo... 30 3.0
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 660 bits (1703), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
Query: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ
Sbjct: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA
Sbjct: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
Query: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL
Sbjct: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 608 bits (1568), Expect = e-174
Identities = 304/330 (92%), Positives = 313/330 (94%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQ FERRFLA RTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
VKHPPSVKYA CFLSELIKKHEAVHTEPLD+LYE LAETLMAKESTQGHRSYLL SGGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
Query: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
TLS+STAIIS+GTTGLVTWDAALYLAEWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
PRAYIFSD HSR+LEQLRGNVLLNGLSLEADIT LDSPRVTVAQLDWDVA VHQLSAFQ
Sbjct: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELGR
Sbjct: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
Query: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 591 bits (1523), Expect = e-169
Identities = 298/330 (90%), Positives = 308/330 (93%), Gaps = 1/330 (0%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
M PEENAGT+LLLQSFE RFL ARTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
VK PPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGH+SYLLP GGSV
Sbjct: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
Query: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
T SESTAIIS+GTTG VTWD ALYL EWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
PRAYIFSD HSRVLEQL+GNVLLNGLSLEADIT SPRVTVAQLDWDVATVHQLSAF
Sbjct: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGN-XSPRVTVAQLDWDVATVHQLSAFH 239
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELG+A
Sbjct: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
Query: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 576 bits (1484), Expect = e-164
Identities = 296/330 (89%), Positives = 296/330 (89%), Gaps = 34/330 (10%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
VKHPPSVKYARCFLSELIKK PSGGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKK----------------------------------PSGGSV 86
Query: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR
Sbjct: 87 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 146
Query: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ
Sbjct: 147 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 206
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA
Sbjct: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
Query: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL
Sbjct: 267 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 527 bits (1358), Expect = e-150
Identities = 273/330 (82%), Positives = 280/330 (84%), Gaps = 34/330 (10%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQ FERRFLA RTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
VKHPPSVKYA CFLSELIKK SGGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKKS----------------------------------SGGSV 86
Query: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
TLS+STAIIS+GTTGLVTWDAALYLAEWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 87 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 146
Query: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
PRAYIFSD HSRVLEQLRGNVLLNGLSLEADIT LDSPRVTVAQLDWDVA VHQLSAFQ
Sbjct: 147 PRAYIFSDPHSRVLEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 206
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELGR
Sbjct: 207 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 266
Query: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 267 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 296
>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo
sapiens]
Length = 158
Score = 152 bits (384), Expect = 4e-37
Identities = 76/88 (86%), Positives = 80/88 (90%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL KTVKHPVC
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTVKHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEP 88
VKHPPSVKYARCFLSELIKK + +P
Sbjct: 61 VKHPPSVKYARCFLSELIKKTCCIAQKP 88
>gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens]
Length = 165
Score = 144 bits (363), Expect = 1e-34
Identities = 80/114 (70%), Positives = 83/114 (72%), Gaps = 27/114 (23%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDIL--------- 51
Query: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLL 114
+KHEAVHTEPLDELYE L ETLMAKESTQGHRSYLL
Sbjct: 52 ------------------QKHEAVHTEPLDELYEVLVETLMAKESTQGHRSYLL 87
>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo
sapiens]
Length = 131
Score = 100 bits (248), Expect = 2e-21
Identities = 52/70 (74%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL KT C
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
Query: 61 VKHPPSVKYA 70
+ PS +++
Sbjct: 57 IAQKPSCRWS 66
>gi|239758137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 89
Score = 64.7 bits (156), Expect = 1e-10
Identities = 30/32 (93%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQ 32
MAPEENAGTELLLQ FERRFLA RTLRSFPWQ
Sbjct: 25 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 56
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 62.4 bits (150), Expect = 5e-10
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQ 32
MAPEENAGTEL LQ FERRFLAAR+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 62.4 bits (150), Expect = 5e-10
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQ 32
MAPEENAGTEL LQ FERRFLAAR+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 51.6 bits (122), Expect = 1e-06
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 139 WDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLR 198
WDAAL L + F + V+ELG+G G+ G I + +D LEQ++
Sbjct: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVG--ILAALQGGDVTITDL-PLALEQIQ 113
Query: 199 GNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMS 258
GNV +A++ A + V L W + H + D+V+ AD++Y
Sbjct: 114 GNV-------QANVPA---GGQAQVRALSWGID--HHVFPANYDLVLGADIVYLEPTFPL 161
Query: 259 LVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQK 313
L+G L+ L CR H +Y+A +R + F L + E+ R E +
Sbjct: 162 LLGTLQHL--CRPH---GTIYLASKMRKEHGTESFFQHLLPQHFQLELAQRDEDE 211
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 48.9 bits (115), Expect = 6e-06
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 137 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQ 196
V WDAA+ L+ + R+ +ELG+G GL G+ + A++ LE
Sbjct: 45 VVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDRKVALEF 101
Query: 197 LRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQP---DVVIAADVLYCP 253
L+ NV N L I K V +L W L +F P D+++ AD++Y
Sbjct: 102 LKSNVQAN---LPPHIQTK-----TVVKELTWG----QNLGSFSPGEFDLILGADIIYLE 149
Query: 254 EAIMSLVGVLRRLAACREH 272
E L+ L L C H
Sbjct: 150 ETFTDLLQTLEHL--CSNH 166
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 48.9 bits (115), Expect = 6e-06
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 137 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQ 196
V WDAA+ L+ + R+ +ELG+G GL G+ + A++ LE
Sbjct: 45 VVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDRKVALEF 101
Query: 197 LRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQP---DVVIAADVLYCP 253
L+ NV N L I K V +L W L +F P D+++ AD++Y
Sbjct: 102 LKSNVQAN---LPPHIQTK-----TVVKELTWG----QNLGSFSPGEFDLILGADIIYLE 149
Query: 254 EAIMSLVGVLRRLAACREH 272
E L+ L L C H
Sbjct: 150 ETFTDLLQTLEHL--CSNH 166
>gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens]
Length = 194
Score = 45.8 bits (107), Expect = 5e-05
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 45/196 (22%)
Query: 130 SYGTTGLVTWDAALYLAEWAIENPA-------VFTNRTVLELGSGAGLTGLAICKMCRPR 182
S G G V WDAA+ L+++ +E P + R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 183 AYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAF--Q 240
A + +D LE+L+ + L + ++ L + V L W ++ F
Sbjct: 86 ATLGADVVVTDLEELQ-----DLLKMNINMNKHLVTGSVQAKVLKWG----EEIEGFPSP 136
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
PD ++ AD +Y E++ L+ L+ ++ ETC + E
Sbjct: 137 PDFILMADCIYYEESLEPLLKTLKDISGF------------------ETCIICCYEQRTM 178
Query: 301 GIRWEVEPRHEQKLFP 316
G E+E ++ +K FP
Sbjct: 179 GKNPEIEKKYFEK-FP 193
>gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens]
Length = 229
Score = 45.4 bits (106), Expect = 7e-05
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 130 SYGTTGLVTWDAALYLAEWAIENPA-------VFTNRTVLELGSGAGLTGLAICKMCRPR 182
S G G V WDAA+ L+++ +E P + R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 183 AYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAF--Q 240
A + +D LE+L+ + L + ++ L + V L W ++ F
Sbjct: 86 ATLGADVVVTDLEELQ-----DLLKMNINMNKHLVTGSVQAKVLKWG----EEIEGFPSP 136
Query: 241 PDVVIAADVLYCPEAIMSLVGVLRRLA 267
PD ++ AD +Y E++ L+ L+ ++
Sbjct: 137 PDFILMADCIYYEESLEPLLKTLKDIS 163
>gi|13376109 hypothetical protein LOC79823 [Homo sapiens]
Length = 323
Score = 43.1 bits (100), Expect = 3e-04
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 119 SVTLSESTAIISYGTTGLVT-WDAALYLAEWAIENPAVFTNRTVLELGSGAG-LTGLAIC 176
S +L+ + S+ TG V W + LA + +++ +F V ELG G L GL +
Sbjct: 107 SGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVA 166
Query: 177 KMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVAT-VHQ 235
+ + +D + + + ++ + N + + +++ L WD T V Q
Sbjct: 167 ISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKTQKISSCVLRWDNETDVSQ 220
Query: 236 LSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTT 295
L D+V+ AD L+ + SLV ++RL R + F R T F
Sbjct: 221 LEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA------MVFAPRRGNTLNQFCN 273
Query: 296 ELGRAGIRWEVEPRHEQKLFPYEEHL 321
+AG + RHE Y+EH+
Sbjct: 274 LAEKAGFCIQ---RHEN----YDEHI 292
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 40.8 bits (94), Expect = 0.002
Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 38/255 (14%)
Query: 83 AVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSVTLSESTAIISYGTTGLVTWDAA 142
A + P L + + ++A+E S + E T G W A
Sbjct: 131 ASDSNPAGPLRDKVHPMILAQEEDDVLGEEAQGSPHDIIRIEHTMATPLEDVGKQVWRGA 190
Query: 143 LYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVL 202
L LA++ + +F T LELG+G GL + M R +D + +L + N+
Sbjct: 191 LLLADYILFRQDLFRGCTALELGAGTGLASIIAATMA--RTVYCTDVGADLLSMCQRNIA 248
Query: 203 LNGLSLEADITAKLDSPRVTVAQLDW---DVAT---------VHQLSAF--QPDVVIAAD 248
LN A V V +LDW D+ T ++S ++ AA+
Sbjct: 249 LN------SHLAATGGGIVRVKELDWLKDDLCTDPKVPFSWSQEEISDLYDHTTILFAAE 302
Query: 249 VLYCPEAIMSLVGVLRRLA-----ACREHQRAPEVYVAFTVRNPE-TCQLF--------- 293
V Y + ++ L RLA AC + E + FT+R+ + TC+ +
Sbjct: 303 VFYDDDLTDAVFKTLSRLAHRLKNACTA-ILSVEKRLNFTLRHLDVTCEAYDHFRSCLHA 361
Query: 294 TTELGRAGIRWEVEP 308
+L +R+ VEP
Sbjct: 362 LEQLADGKLRFVVEP 376
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 106 TQGHRSYLLPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPAV--FTNRTVLE 163
TQ H + +G + + ES I SYG V W A+ L ++ E+ F + +LE
Sbjct: 67 TQEHYRF---AGKEIVIQES--IESYGA---VVWPGAMALCQYLEEHAEELNFQDAKILE 118
Query: 164 LGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTV 223
+G+G GL + + A + + VL L+ N+L N L A + V
Sbjct: 119 IGAGPGLVSIVASIL---GAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPE--------V 167
Query: 224 AQLDW--DVATVHQLSAFQPDVVIAADVLY 251
+L W D+ SAF D V+A+DV+Y
Sbjct: 168 KELVWGEDLDKNFPKSAFYYDYVLASDVVY 197
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 37.7 bits (86), Expect = 0.014
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Query: 136 LVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHS--RV 193
+ W A+ LA++ + + +LE+G+G L G+ K C I SD
Sbjct: 1 MYVWPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAK-CGAEV-ILSDSSELPHC 58
Query: 194 LEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCP 253
LE R + +N L P + V L W + L+ D+++A+DV + P
Sbjct: 59 LEVCRQSCQMNNL------------PHLQVVGLTWGHISWDLLALPPQDIILASDVFFEP 106
Query: 254 EAIMSLVGVL 263
E ++ +
Sbjct: 107 EDFEDILATI 116
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 35.0 bits (79), Expect = 0.092
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 137 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA 174
+ W L+ + ++NP V ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 35.0 bits (79), Expect = 0.092
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 137 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA 174
+ W L+ + ++NP V ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 35.0 bits (79), Expect = 0.092
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 137 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA 174
+ W L+ + ++NP V ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 33.9 bits (76), Expect = 0.21
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 95 ALAETLMAKESTQGHRSYLLPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPA 154
++ +T++ KE+ G ++ S S S I GL W+ L + +
Sbjct: 130 SVVKTILLKENFPGEN--IVSKSFS---SHSDLITGVYEGGLKIWECTFDLLAYFTKAKV 184
Query: 155 VFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLR-GNVLLN 204
F + VL+LG G+GL G+ K + F D +S V++++ NV+ N
Sbjct: 185 KFAGKKVLDLGCGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 32.7 bits (73), Expect = 0.46
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 139 WDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGL 173
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
>gi|239756584 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 1.0
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 154 AVFTNRTVLELGSGAG---LTGLAICK--------------MCRPRAYIFSDCHSRVLEQ 196
A+ T+R++ LG+G G L GLA + +PRA + +DC + EQ
Sbjct: 7 ALLTSRSISALGTGRGRDALPGLASSHTALPNLASPAIQPTVSQPRAPLTTDCCRALWEQ 66
Query: 197 LRGNVLLNG 205
RG+ LL G
Sbjct: 67 RRGSFLLEG 75
>gi|239751076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 1.0
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 154 AVFTNRTVLELGSGAG---LTGLAICK--------------MCRPRAYIFSDCHSRVLEQ 196
A+ T+R++ LG+G G L GLA + +PRA + +DC + EQ
Sbjct: 7 ALLTSRSISALGTGRGRDALPGLASSHTALPNLASPAIQPTVSQPRAPLTTDCCRALWEQ 66
Query: 197 LRGNVLLNG 205
RG+ LL G
Sbjct: 67 RRGSFLLEG 75
>gi|239745563 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 1.0
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 154 AVFTNRTVLELGSGAG---LTGLAICK--------------MCRPRAYIFSDCHSRVLEQ 196
A+ T+R++ LG+G G L GLA + +PRA + +DC + EQ
Sbjct: 7 ALLTSRSISALGTGRGRDALPGLASSHTALPNLASPAIQPTVSQPRAPLTTDCCRALWEQ 66
Query: 197 LRGNVLLNG 205
RG+ LL G
Sbjct: 67 RRGSFLLEG 75
>gi|16306530 cadherin 10, type 2 preproprotein [Homo sapiens]
Length = 788
Score = 30.4 bits (67), Expect = 2.3
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 43 DSELLRDILHKTVKHPVCVKHPPSVKYARCFLSELIKKHEAVHT-EPLDEL----YE--- 94
+ +L RDI+ +T+ P P R F++E +K+H+ T P D L YE
Sbjct: 683 EKKLRRDIIPETLFIPRRTPTAPDNTDVRDFINERLKEHDLDPTAPPYDSLATYAYEGND 742
Query: 95 ALAETLMAKES--TQGHRSY 112
++AE+L + ES T+G ++Y
Sbjct: 743 SIAESLSSLESGTTEGDQNY 762
>gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo
sapiens]
Length = 1980
Score = 30.0 bits (66), Expect = 3.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 73 FLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSVTLS 123
F+ K+ EA +PLDELYE A + HR+ G+ T S
Sbjct: 1018 FMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTS 1068
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,207,755
Number of Sequences: 37866
Number of extensions: 500845
Number of successful extensions: 1202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1169
Number of HSP's gapped (non-prelim): 40
length of query: 330
length of database: 18,247,518
effective HSP length: 103
effective length of query: 227
effective length of database: 14,347,320
effective search space: 3256841640
effective search space used: 3256841640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.