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Search of human proteins with 42475941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42475941 zinc finger protein 261 [Homo sapiens]
(1370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42475941 zinc finger protein 261 [Homo sapiens] 2866 0.0
gi|4827067 zinc finger protein 261 [Homo sapiens] 2866 0.0
gi|37574606 zinc finger protein 198 [Homo sapiens] 944 0.0
gi|4508011 zinc finger protein 198 [Homo sapiens] 944 0.0
gi|44890068 zinc finger protein 262 [Homo sapiens] 833 0.0
gi|115511046 zinc finger protein 258 [Homo sapiens] 270 9e-72
gi|38570099 glutamine-rich 1 [Homo sapiens] 253 7e-67
gi|38570097 glutamine-rich 1 [Homo sapiens] 253 7e-67
gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] 171 4e-42
gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens] 161 3e-39
gi|89001100 zinc finger protein 237 isoform 1 [Homo sapiens] 91 1e-17
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 63 2e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 61 8e-09
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 54 8e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 52 4e-06
gi|55741647 hypothetical protein LOC158405 [Homo sapiens] 52 4e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 50 1e-05
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 50 1e-05
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho... 50 1e-05
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 50 1e-05
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 50 1e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 1e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 49 3e-05
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 49 3e-05
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 49 3e-05
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 48 6e-05
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 48 7e-05
gi|58530845 zyxin [Homo sapiens] 48 7e-05
gi|4508047 zyxin [Homo sapiens] 48 7e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 47 1e-04
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 2866 bits (7429), Expect = 0.0
Identities = 1370/1370 (100%), Positives = 1370/1370 (100%)
Query: 1 MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60
MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL
Sbjct: 1 MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60
Query: 61 DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120
DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT
Sbjct: 61 DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120
Query: 121 PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180
PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP
Sbjct: 121 PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180
Query: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240
QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS
Sbjct: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240
Query: 241 ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300
ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA
Sbjct: 241 ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300
Query: 301 GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360
GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI
Sbjct: 301 GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360
Query: 361 WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420
WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH
Sbjct: 361 WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420
Query: 421 EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480
EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC
Sbjct: 421 EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480
Query: 481 NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540
NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT
Sbjct: 481 NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540
Query: 541 GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600
GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG
Sbjct: 541 GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600
Query: 601 KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660
KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC
Sbjct: 601 KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660
Query: 661 VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720
VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC
Sbjct: 661 VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720
Query: 721 HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780
HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ
Sbjct: 721 HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780
Query: 781 TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840
TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ
Sbjct: 781 TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840
Query: 841 NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900
NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM
Sbjct: 841 NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900
Query: 901 FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960
FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS
Sbjct: 901 FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960
Query: 961 AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020
AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV
Sbjct: 961 AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020
Query: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080
GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA
Sbjct: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080
Query: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140
NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL
Sbjct: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140
Query: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200
GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL
Sbjct: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200
Query: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260
GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP
Sbjct: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260
Query: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320
VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL
Sbjct: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320
Query: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD
Sbjct: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 2866 bits (7429), Expect = 0.0
Identities = 1370/1370 (100%), Positives = 1370/1370 (100%)
Query: 1 MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60
MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL
Sbjct: 1 MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60
Query: 61 DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120
DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT
Sbjct: 61 DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120
Query: 121 PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180
PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP
Sbjct: 121 PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180
Query: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240
QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS
Sbjct: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240
Query: 241 ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300
ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA
Sbjct: 241 ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300
Query: 301 GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360
GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI
Sbjct: 301 GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360
Query: 361 WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420
WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH
Sbjct: 361 WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420
Query: 421 EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480
EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC
Sbjct: 421 EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480
Query: 481 NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540
NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT
Sbjct: 481 NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540
Query: 541 GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600
GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG
Sbjct: 541 GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600
Query: 601 KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660
KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC
Sbjct: 601 KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660
Query: 661 VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720
VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC
Sbjct: 661 VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720
Query: 721 HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780
HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ
Sbjct: 721 HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780
Query: 781 TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840
TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ
Sbjct: 781 TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840
Query: 841 NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900
NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM
Sbjct: 841 NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900
Query: 901 FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960
FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS
Sbjct: 901 FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960
Query: 961 AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020
AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV
Sbjct: 961 AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020
Query: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080
GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA
Sbjct: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080
Query: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140
NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL
Sbjct: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140
Query: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200
GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL
Sbjct: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200
Query: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260
GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP
Sbjct: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260
Query: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320
VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL
Sbjct: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320
Query: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD
Sbjct: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
>gi|37574606 zinc finger protein 198 [Homo sapiens]
Length = 1377
Score = 944 bits (2441), Expect = 0.0
Identities = 495/1125 (44%), Positives = 686/1125 (60%), Gaps = 100/1125 (8%)
Query: 288 PRMSLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
P+ + SV Q+ + K+TCA+C+ PLQKGQTAYQRKG LFCS++CL++FS KP
Sbjct: 311 PKQIFQPSVQQQPTKPV---KVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKP 367
Query: 348 SGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADAT 407
+ KK C CKK+I K ++VAQ S SF EFC++ CLSLYE +Q P G + +
Sbjct: 368 APKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQN---PTKG-ALNKS 423
Query: 408 RCSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGP 467
RC+IC K E+ HEVS ++ H+LCSD CF+++R GL NCC+QCG Y+ +K G
Sbjct: 424 RCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSK--GAGN 481
Query: 468 ELLFHEGQQKRFCNTTCLGAYKK------------------------KNTRVYPCVWCKT 503
+L +GQQKRFC +C+ YK+ K ++ C C+T
Sbjct: 482 NVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQDSFLMQPEKYGKLTTCTGCRT 541
Query: 504 LCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVD 563
C+ F+M + NG +CS C S+K K A C FC+R+ D
Sbjct: 542 QCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPD 601
Query: 564 RTVYQFCSPSCWTKFQ----RTSPEG------GIHLSCHYCHSLFSGKPEVLDWQDQVFQ 613
+Y FC+ SC KFQ ++SP G I L C+YC + F KPE+L+W+++V Q
Sbjct: 602 GKLYNFCNSSCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQ 661
Query: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLG 673
FC + C +D+K+L +V+ CE+C++EK LHE + FSGV++ FCSEGC LLYKQDF ++LG
Sbjct: 662 FCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLG 721
Query: 674 LCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQGKLLETI 733
L C+TC YCSQ C++G T++LDG DFCSEDC K+ WY KAARC CK QG L E +
Sbjct: 722 LRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDCCKSQGTLKERV 781
Query: 734 HWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTV 793
WRG+++HFC+Q CLLRFY QQN+PN+ TQ GPE+L Q ++ S+TK+
Sbjct: 782 QWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQT-----SRTKM------ 830
Query: 794 RTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSK 853
T PPP P P KNKA +CKPL + CK M++K
Sbjct: 831 --------------------TGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTK 870
Query: 854 GSQTEE-WKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKI 912
QT++ W+ + + +PIPVP+++PVPMH+Y Q +PVP ++P+PVPVP+FLP L+S++KI
Sbjct: 871 SCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKI 930
Query: 913 VETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFG 972
IEELK K+ S+ L+ ++L M +M++E D+ ++ ++ S ++ + D+ G
Sbjct: 931 PAAIEELKSKVSSDALDTELLTMTDMMSE----DEGKTETTNINS------VIIETDIIG 980
Query: 973 P--ARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLVGPEDVSTEQD 1030
++ M +V EP D+E DFP+ +++ +FL + G E EQ
Sbjct: 981 SDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLP-PVFGEE--YEEQP 1037
Query: 1031 LPRTMRKGQKRLVLSESCSRDSMSSQPSCT-GLNYSYGVNAWKCWVQSKYANGETSKGDE 1089
PR+ +KG KR +S S D S C+ Y+YGVNAWK WV+++ + + DE
Sbjct: 1038 RPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDE 1097
Query: 1090 LRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLEN 1149
L+ K +++KED+L+ + AELNYGLA FV EI RPNGE Y PDSIYYLCLGIQ+YL +
Sbjct: 1098 LK-SSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGS 1156
Query: 1150 NRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYSPFVLL 1209
NR NIF D Y TF QELNK L +WQP++LP+ ++FSRVEE++LW KQLG +SP LL
Sbjct: 1157 NRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALL 1216
Query: 1210 NTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVRQRKGRDT 1269
NTL +FNTK+FGL+T E+H++LSF V R +K P +RY V G D
Sbjct: 1217 NTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKK--NPLTMENKACLRY--QVSSLCGTDN 1272
Query: 1270 ----GPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERS 1325
GKRK ED+ P+ EQ EN NP RCPVK +E YLSK P++L R DVFYLQPE S
Sbjct: 1273 EDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPECS 1332
Query: 1326 CIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
+SP+WY+ +DR+ LE+ML R+L V++IY++ +ED D
Sbjct: 1333 SSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD 1377
>gi|4508011 zinc finger protein 198 [Homo sapiens]
Length = 1377
Score = 944 bits (2441), Expect = 0.0
Identities = 495/1125 (44%), Positives = 686/1125 (60%), Gaps = 100/1125 (8%)
Query: 288 PRMSLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
P+ + SV Q+ + K+TCA+C+ PLQKGQTAYQRKG LFCS++CL++FS KP
Sbjct: 311 PKQIFQPSVQQQPTKPV---KVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKP 367
Query: 348 SGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADAT 407
+ KK C CKK+I K ++VAQ S SF EFC++ CLSLYE +Q P G + +
Sbjct: 368 APKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQN---PTKG-ALNKS 423
Query: 408 RCSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGP 467
RC+IC K E+ HEVS ++ H+LCSD CF+++R GL NCC+QCG Y+ +K G
Sbjct: 424 RCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSK--GAGN 481
Query: 468 ELLFHEGQQKRFCNTTCLGAYKK------------------------KNTRVYPCVWCKT 503
+L +GQQKRFC +C+ YK+ K ++ C C+T
Sbjct: 482 NVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQDSFLMQPEKYGKLTTCTGCRT 541
Query: 504 LCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVD 563
C+ F+M + NG +CS C S+K K A C FC+R+ D
Sbjct: 542 QCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPD 601
Query: 564 RTVYQFCSPSCWTKFQ----RTSPEG------GIHLSCHYCHSLFSGKPEVLDWQDQVFQ 613
+Y FC+ SC KFQ ++SP G I L C+YC + F KPE+L+W+++V Q
Sbjct: 602 GKLYNFCNSSCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQ 661
Query: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLG 673
FC + C +D+K+L +V+ CE+C++EK LHE + FSGV++ FCSEGC LLYKQDF ++LG
Sbjct: 662 FCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLG 721
Query: 674 LCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQGKLLETI 733
L C+TC YCSQ C++G T++LDG DFCSEDC K+ WY KAARC CK QG L E +
Sbjct: 722 LRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDCCKSQGTLKERV 781
Query: 734 HWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTV 793
WRG+++HFC+Q CLLRFY QQN+PN+ TQ GPE+L Q ++ S+TK+
Sbjct: 782 QWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQT-----SRTKM------ 830
Query: 794 RTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSK 853
T PPP P P KNKA +CKPL + CK M++K
Sbjct: 831 --------------------TGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTK 870
Query: 854 GSQTEE-WKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKI 912
QT++ W+ + + +PIPVP+++PVPMH+Y Q +PVP ++P+PVPVP+FLP L+S++KI
Sbjct: 871 SCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKI 930
Query: 913 VETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFG 972
IEELK K+ S+ L+ ++L M +M++E D+ ++ ++ S ++ + D+ G
Sbjct: 931 PAAIEELKSKVSSDALDTELLTMTDMMSE----DEGKTETTNINS------VIIETDIIG 980
Query: 973 P--ARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLVGPEDVSTEQD 1030
++ M +V EP D+E DFP+ +++ +FL + G E EQ
Sbjct: 981 SDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLP-PVFGEE--YEEQP 1037
Query: 1031 LPRTMRKGQKRLVLSESCSRDSMSSQPSCT-GLNYSYGVNAWKCWVQSKYANGETSKGDE 1089
PR+ +KG KR +S S D S C+ Y+YGVNAWK WV+++ + + DE
Sbjct: 1038 RPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDE 1097
Query: 1090 LRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLEN 1149
L+ K +++KED+L+ + AELNYGLA FV EI RPNGE Y PDSIYYLCLGIQ+YL +
Sbjct: 1098 LK-SSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGS 1156
Query: 1150 NRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYSPFVLL 1209
NR NIF D Y TF QELNK L +WQP++LP+ ++FSRVEE++LW KQLG +SP LL
Sbjct: 1157 NRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALL 1216
Query: 1210 NTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVRQRKGRDT 1269
NTL +FNTK+FGL+T E+H++LSF V R +K P +RY V G D
Sbjct: 1217 NTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKK--NPLTMENKACLRY--QVSSLCGTDN 1272
Query: 1270 ----GPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERS 1325
GKRK ED+ P+ EQ EN NP RCPVK +E YLSK P++L R DVFYLQPE S
Sbjct: 1273 EDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPECS 1332
Query: 1326 CIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
+SP+WY+ +DR+ LE+ML R+L V++IY++ +ED D
Sbjct: 1333 SSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD 1377
>gi|44890068 zinc finger protein 262 [Homo sapiens]
Length = 1548
Score = 833 bits (2152), Expect = 0.0
Identities = 480/1231 (38%), Positives = 684/1231 (55%), Gaps = 185/1231 (15%)
Query: 304 AVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSG------KKTCTFCK 357
A +++C+ C+ LQKGQTAYQRKG QLFCS+ CLT ++ P+ KKTC+ C
Sbjct: 334 ATAVRVSCSGCKKILQKGQTAYQRKGSTQLFCSTLCLTGYTVPPARPPPPLTKKTCSSCS 393
Query: 358 KEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGE 417
K+I N KD + AQ + + +FC+ CLS YE ++ +PI + +T+CS+CQK
Sbjct: 394 KDILNPKDVISAQFENTTTSKDFCSQSCLSTYELKK-KPIVTINTNSISTKCSMCQKNAV 452
Query: 418 VLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQK 477
+ HEV+ +VVH+LCSD+CFSKFR+ L NCC+ CG Y Y+ GS +L EGQ K
Sbjct: 453 IRHEVNYQNVVHKLCSDACFSKFRSANNLTMNCCENCGGYCYS--GSGQCHMLQIEGQSK 510
Query: 478 RFCNTTCLGAYKKKNTRVYPC-----------------------VWCKTLCKNFEMLSHV 514
+FC+++C+ AYK+K+ ++ PC ++C C + + V
Sbjct: 511 KFCSSSCITAYKQKSAKITPCALCKSLRSSAEMIENTNSLGKTELFCSVNCLSAYRVKMV 570
Query: 515 DRNG--------KTSL---------------FCSLCCTTSYKV---KQAGLTGPPRPCSF 548
G KTS FCS C +++ K G+ P S
Sbjct: 571 TSAGVQVQCNSCKTSAIPQYHLAMSDGSIRNFCSYSCVVAFQNLFNKPTGMNSSVVPLSQ 630
Query: 549 CRRSLSDPC---------YYNKVDRTVYQFCSPSCWTKFQRTSPEGG-----IHLSCHYC 594
+ +S P + V T + + + S G + L C +C
Sbjct: 631 GQVIVSIPTGSTVSAGGGSTSAVSPTSISSSAAAGLQRLAAQSQHVGFARSVVKLKCQHC 690
Query: 595 HSLFSGKPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKS 654
+ LF+ KPE+LD++ ++FQFC ++C +++K++ V++ CE+C+ EK++ E +RFSG +KS
Sbjct: 691 NRLFATKPELLDYKGKMFQFCGKNCSDEYKKINNVMAMCEYCKIEKIVKETVRFSGADKS 750
Query: 655 FCSEGCVLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWY 714
FCSEGC LLYK D K+ G C C+YC QT + V L G +FC E+C SKY + +
Sbjct: 751 FCSEGCKLLYKHDLAKRWGNHCKMCSYCLQTSPKLVQNNLGGKVEEFCCEECMSKYTVLF 810
Query: 715 CKAARCHACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQ---------NQPNLD---- 761
+ A+C ACKRQGKL E++ WRG+++HFCN C+L F +QQ N N+
Sbjct: 811 YQMAKCDACKRQGKLSESLKWRGEMKHFCNLLCILMFCNQQSVCDPPSQNNAANISMVQA 870
Query: 762 TQSGPESLLNSQSP-----ESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAP 816
+GP SL +P S P+ NSN+V KI + S T
Sbjct: 871 ASAGPPSLRKDSTPVIANVVSLASAPAAQPTVNSNSVLQGAVPTVTAKI-IGDASTQTDA 929
Query: 817 TPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEW--KPQVIVLPIPVPIF 874
PP P KNKA +CKP+ Q + SCK ++K QTE+ +PQ+IV+P+PVP+F
Sbjct: 930 LKLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQNKECQTEDTPSQPQIIVVPVPVPVF 989
Query: 875 VPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKIVETIEELKVKIPSNPLEADILA 934
VP+P+HLY Q PVPF +P+P+PVPM +P++++S DK+ E+IE++K K+P++P EAD+L
Sbjct: 990 VPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDKVTESIEDIKEKLPTHPFEADLLE 1049
Query: 935 MAEMIAEAEELDKASSD---------LCDLVSNQSAEGLLEDCDLFGPA-------RDDV 978
MAEMIAE EE S D + +G DL A +++
Sbjct: 1050 MAEMIAEDEEKKTLSQGESQTSEHELFLDTKIFEKDQGSTYSGDLESEAVSTPHSWEEEL 1109
Query: 979 LAMAVKMANVLD-----------EPGQDLEADFPKNPLD-INPSVDFLFDCGLVGPEDVS 1026
A+K V + E QDLEADFP + D +N G+
Sbjct: 1110 NHYALKSNAVQEADSELKQFSKGETEQDLEADFPSDSFDPLNKGQ------GIQARSRTR 1163
Query: 1027 T--EQDLPRTMRKGQKRLVLS-----------ESCSRDSMSSQPSCTGLNYSYGVNAWKC 1073
P+ R+G+K+ +++ + CS M+ L Y YGVNAWK
Sbjct: 1164 RRHRDGFPQPRRRGRKKSIVAVEPRSLIQGAFQGCSVSGMT-------LKYMYGVNAWKN 1216
Query: 1074 WVQSKYANGE-----------------------------TSKGDELRFGPKPMRIKEDIL 1104
WVQ K A E + + E + +++KEDIL
Sbjct: 1217 WVQWKNAKEEQGDLKCGGVEQASSSPRSDPLGSTQDHALSQESSEPGCRVRSIKLKEDIL 1276
Query: 1105 ACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTF 1164
+C+ AEL+ GL QF++E+ RPNGE+Y+PDSI YLCLGIQQYL EN R+ NIFT+ Y F
Sbjct: 1277 SCTFAELSLGLCQFIQEVRRPNGEKYDPDSILYLCLGIQQYLFENGRIDNIFTE-PYSRF 1335
Query: 1165 VQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQT 1224
+ EL K L W+PT+LPN +FSR+EEEHLWECKQLG YSP VLLNTL+FFNTK+F L+
Sbjct: 1336 MIELTKLLKIWEPTILPNGYMFSRIEEEHLWECKQLGAYSPIVLLNTLLFFNTKYFQLKN 1395
Query: 1225 AEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVRQRKGR----DTGPGKRKREDEA 1280
EH++LSF +V+R++R T + +TK+ +R++ P+++++ G KR +DE
Sbjct: 1396 VTEHLKLSFAHVMRRTR---TLKYSTKMTYLRFFPPLQKQESEPDKLTVGKRKRNEDDEV 1452
Query: 1281 PI-LEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPM 1339
P+ +E EN NPLRCPV+ YEFYLSKC ES++ RNDVFYLQPERSC+ SP+WYS P+
Sbjct: 1453 PVGVEMAENTDNPLRCPVRLYEFYLSKCSESVKQRNDVFYLQPERSCVPNSPMWYSTFPI 1512
Query: 1340 DRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
D L++ML RIL VRE++EEL + ED D
Sbjct: 1513 DPGTLDTMLTRILMVREVHEELAKAKSEDSD 1543
Score = 58.2 bits (139), Expect = 5e-08
Identities = 49/190 (25%), Positives = 71/190 (37%), Gaps = 19/190 (10%)
Query: 297 SQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFC 356
SQ G + K+ C HC KG FC +C + K + C +C
Sbjct: 673 SQHVGFARSVVKLKCQHCNRLFATKPELLDYKGKMFQFCGKNCSDEYKKINNVMAMCEYC 732
Query: 357 KKEIWNTKDSVVAQT-GSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKT 415
K E +V +T G+ FC+ C LY+ + + G+ CS C +T
Sbjct: 733 KIE------KIVKETVRFSGADKSFCSEGCKLLYKHDLAK---RWGN--HCKMCSYCLQT 781
Query: 416 GEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQ 475
L + + G V C + C SK+ + CD C K E L G+
Sbjct: 782 SPKLVQNNLGGKVEEFCCEECMSKYTV-LFYQMAKCDAC------KRQGKLSESLKWRGE 834
Query: 476 QKRFCNTTCL 485
K FCN C+
Sbjct: 835 MKHFCNLLCI 844
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 270 bits (689), Expect = 9e-72
Identities = 191/643 (29%), Positives = 286/643 (44%), Gaps = 99/643 (15%)
Query: 304 AVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKK----PSGKKTCTFCKKE 359
AV K+ C+ C+ L KGQTAY + G QLFCS+ C+T S P KKTCT C K+
Sbjct: 85 AVAIKVFCSGCKKMLYKGQTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTNCSKD 144
Query: 360 IWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVL 419
I N KD + + + +FC+ CLS YE ++ +P+ + +T+CS+CQK +
Sbjct: 145 ILNPKDVITTRFENSYPSKDFCSQSCLSSYELKK-KPVVTIYTKSISTKCSMCQKNADTR 203
Query: 420 HEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRF 479
EV +VVH LCSD+CFSKF + L NCC+ CG+Y Y+ +G Q ++
Sbjct: 204 FEVKYQNVVHGLCSDACFSKFHSTNNLTMNCCENCGSYCYSSSG---------PCQSQKV 254
Query: 480 CNTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGL 539
++T + AYK+ + ++ P K+L + EM+ + +GKT LFCS+ C ++Y+VK
Sbjct: 255 FSSTSVTAYKQNSAQIPPYALGKSLRPSAEMIETTNDSGKTELFCSINCLSAYRVKTVTS 314
Query: 540 TGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQR--TSPEG----GIHL---- 589
+G C C+ S + + T+Y FCS SC FQ + P+G + L
Sbjct: 315 SGVQVSCHSCKTSAIPQYHLAMSNGTIYSFCSSSCVVAFQNVFSKPKGTNSSAVPLSQGQ 374
Query: 590 ------SCHYCHSLFSG-----KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVS-QCEHCR 637
S S+ G P + + + VV +C+HC
Sbjct: 375 VVVSPPSSRSAVSIGGGNTSAVSPSSIRGSAAASLQPLAEQSQQVALTHTVVKLKCQHCN 434
Query: 638 QEKLLHEKLRF-SGVEKSFCSEGCVLLYKQDFTKKLGLC--C--------------ITCT 680
+L F G FC + C YK+ K + +C C +
Sbjct: 435 HLFATKPELLFYKGKMFLFCGKNCSDEYKKK-NKVVAMCDYCKLQKIIKETVRFSGVDKP 493
Query: 681 YCSQTCQ--------------------------RGVTEQLDGSTWDFCSEDCKSKYLLWY 714
+CS+ C+ V +L+G +FC EDC SK+ + +
Sbjct: 494 FCSEVCKFLSARDFGERWGNYCKMCSYCSQTSPNLVENRLEGKLEEFCCEDCMSKFTVLF 553
Query: 715 CKAARCHACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQ--------QNQPNLDTQSGP 766
+ A+C CKRQGKL E+I WRG I+HFCN C+L F Q QN+ N+
Sbjct: 554 YQMAKCDGCKRQGKLSESIKWRGNIKHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTA 613
Query: 767 ESLLNSQSPESKP---------QTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPT 817
+ L S ++ P + P+ N+N+V KI + A
Sbjct: 614 VTELPSARTDTTPVITSVMSLAKIPATLSTGNTNSVLKGAVTKEAAKIIQDESTQEDAMK 673
Query: 818 PP--PPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTE 858
P P+ KNK CKP+ Q + SCK + K QT+
Sbjct: 674 FPSSQSSQPSRLLKNKGISCKPVTQTKATSCKPHTQHKECQTD 716
Score = 48.5 bits (114), Expect = 4e-05
Identities = 47/190 (24%), Positives = 65/190 (34%), Gaps = 19/190 (10%)
Query: 297 SQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFC 356
SQ+ + K+ C HC KG LFC +C + KK C +C
Sbjct: 416 SQQVALTHTVVKLKCQHCNHLFATKPELLFYKGKMFLFCGKNCSDEYKKKNKVVAMCDYC 475
Query: 357 KKEIWNTKDSVVAQT-GSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKT 415
K + ++ +T G FC+ VC L R + CS C +T
Sbjct: 476 KLQ------KIIKETVRFSGVDKPFCSEVCKFL----SARDFGERWGNY-CKMCSYCSQT 524
Query: 416 GEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQ 475
L E + C + C SKF + CD C K E + G
Sbjct: 525 SPNLVENRLEGKLEEFCCEDCMSKFTV-LFYQMAKCDGC------KRQGKLSESIKWRGN 577
Query: 476 QKRFCNTTCL 485
K FCN C+
Sbjct: 578 IKHFCNLFCV 587
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 253 bits (647), Expect = 7e-67
Identities = 137/300 (45%), Positives = 185/300 (61%), Gaps = 15/300 (5%)
Query: 1067 GVNAWKCWVQSKYANGETSKGDELRFGP----KPMRIKEDILACSAAELNYGLAQFVREI 1122
G+ WK W Q+K N E K + R P + +R +ED+++ + AELNYGL RE
Sbjct: 478 GLEVWKNWAQTK--NAELEKDAQNRLAPIGRRQLLRFQEDLISSAVAELNYGLCLMTREA 535
Query: 1123 TRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPN 1182
GE Y+PD +YY+ L IQ+YL EN R+ +IF+DLYY+ F + L++ L QP + P
Sbjct: 536 RNGEGEPYDPDVLYYIFLCIQKYLFENGRVDDIFSDLYYVRFTEWLHEVLKDVQPRVTPL 595
Query: 1183 NTVF-SRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSR 1241
V S V EE LWECKQLG +SP LL TLMFFNTK+F L+T ++HM+L+F+ V+RQ++
Sbjct: 596 GYVLPSHVTEEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTK 655
Query: 1242 KCTTPRGTTKVVSIRYYAPVRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYE 1301
K K SIRY + + G++ +D EQ EN NPLRCP+K Y+
Sbjct: 656 K-NPSNPKDKSTSIRYLKALGIHQ-----TGQKVTDDM--YAEQTENPENPLRCPIKLYD 707
Query: 1302 FYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEEL 1361
FYL KCP+S++ RND FYL PE SP+WYSV P+ R + ML RIL +REI E +
Sbjct: 708 FYLFKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQPISREQMGQMLTRILVIREIQEAI 767
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 253 bits (647), Expect = 7e-67
Identities = 137/300 (45%), Positives = 185/300 (61%), Gaps = 15/300 (5%)
Query: 1067 GVNAWKCWVQSKYANGETSKGDELRFGP----KPMRIKEDILACSAAELNYGLAQFVREI 1122
G+ WK W Q+K N E K + R P + +R +ED+++ + AELNYGL RE
Sbjct: 478 GLEVWKNWAQTK--NAELEKDAQNRLAPIGRRQLLRFQEDLISSAVAELNYGLCLMTREA 535
Query: 1123 TRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPN 1182
GE Y+PD +YY+ L IQ+YL EN R+ +IF+DLYY+ F + L++ L QP + P
Sbjct: 536 RNGEGEPYDPDVLYYIFLCIQKYLFENGRVDDIFSDLYYVRFTEWLHEVLKDVQPRVTPL 595
Query: 1183 NTVF-SRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSR 1241
V S V EE LWECKQLG +SP LL TLMFFNTK+F L+T ++HM+L+F+ V+RQ++
Sbjct: 596 GYVLPSHVTEEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTK 655
Query: 1242 KCTTPRGTTKVVSIRYYAPVRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYE 1301
K K SIRY + + G++ +D EQ EN NPLRCP+K Y+
Sbjct: 656 K-NPSNPKDKSTSIRYLKALGIHQ-----TGQKVTDDM--YAEQTENPENPLRCPIKLYD 707
Query: 1302 FYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEEL 1361
FYL KCP+S++ RND FYL PE SP+WYSV P+ R + ML RIL +REI E +
Sbjct: 708 FYLFKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQPISREQMGQMLTRILVIREIQEAI 767
>gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]
Length = 1142
Score = 171 bits (433), Expect = 4e-42
Identities = 94/234 (40%), Positives = 130/234 (55%), Gaps = 7/234 (2%)
Query: 303 SAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSG----KKTCTFCKK 358
S +++CA C+ LQKGQTAYQRKG QLFCS C+T + S K+TC+ C K
Sbjct: 81 STTAIQVSCAGCKKILQKGQTAYQRKGSAQLFCSIPCITEYISSASSPVPSKRTCSNCSK 140
Query: 359 EIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEV 418
+I N KD + Q S FC+ CLS YE ++++P + T+CS+CQKT +
Sbjct: 141 DILNPKDVISVQLEDTTSCKTFCSLSCLSSYE-EKRKPFVTICTNSILTKCSMCQKTAII 199
Query: 419 LHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKR 478
+EV +V H LCS++C SKF + NCC+ CG Y Y T S +L EGQ
Sbjct: 200 QYEVKYQNVKHNLCSNACLSKFHSANNFIMNCCENCGTYCY--TSSSLSHILQMEGQSHY 257
Query: 479 FCNTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSY 532
F ++ + AYK+K + V CK L + EM+ GKT LFCS+ C ++Y
Sbjct: 258 FNSSKSITAYKQKPAKPLISVPCKPLKPSDEMIETTSDLGKTELFCSINCFSAY 311
Score = 57.0 bits (136), Expect = 1e-07
Identities = 53/258 (20%), Positives = 95/258 (36%), Gaps = 47/258 (18%)
Query: 498 CVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPC 557
C CK + + + + R G LFCS+ C T Y + R CS C + + +P
Sbjct: 89 CAGCKKILQKGQ--TAYQRKGSAQLFCSIPCITEYISSASSPVPSKRTCSNCSKDILNPK 146
Query: 558 YYNKVD----RTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSGKPEVLDWQDQVFQ 613
V + FCS SC + ++ KP F
Sbjct: 147 DVISVQLEDTTSCKTFCSLSCLSSYEE------------------KRKP---------FV 179
Query: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLG 673
C + ++++C C++ ++ ++++ V+ + CS C+ + +
Sbjct: 180 TICTN---------SILTKCSMCQKTAIIQYEVKYQNVKHNLCSNACLSKF-HSANNFIM 229
Query: 674 LCCITC-TYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCK---AARCHACKRQGKL 729
CC C TYC + Q++G + F S + Y K + C K ++
Sbjct: 230 NCCENCGTYCYTSSSLSHILQMEGQSHYFNSSKSITAYKQKPAKPLISVPCKPLKPSDEM 289
Query: 730 LETIHWRGQIRHFCNQQC 747
+ET G+ FC+ C
Sbjct: 290 IETTSDLGKTELFCSINC 307
Score = 33.9 bits (76), Expect = 1.1
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 650 GVEKSFCSEGCVLLYKQDFTKKLGLCCITCTYCSQTCQRG---VTEQLDGSTW--DFCSE 704
G + FCS C+ Y + + TC+ CS+ ++ QL+ +T FCS
Sbjct: 107 GSAQLFCSIPCITEYISSASSPVP-SKRTCSNCSKDILNPKDVISVQLEDTTSCKTFCSL 165
Query: 705 DCKSKY------LLWYCKAA---RCHACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQ 755
C S Y + C + +C C++ + + ++ + C+ CL +F+S
Sbjct: 166 SCLSSYEEKRKPFVTICTNSILTKCSMCQKTAIIQYEVKYQNVKHNLCSNACLSKFHSAN 225
Query: 756 N 756
N
Sbjct: 226 N 226
Score = 32.3 bits (72), Expect = 3.2
Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 311 CAHC-RTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTC-----TFCKKEIWNTK 364
C+ C +T + + + YQ + CS++CL+ F + C T+C T
Sbjct: 190 CSMCQKTAIIQYEVKYQN--VKHNLCSNACLSKFHSANNFIMNCCENCGTYCY-----TS 242
Query: 365 DSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLHEVSN 424
S+ G H F +S ++ Y+ + +P+ + C + + E++ S+
Sbjct: 243 SSLSHILQMEGQSHYFNSSKSITAYKQKPAKPLI-------SVPCKPLKPSDEMIETTSD 295
Query: 425 GSVVHRLCSDSCFSKFRANK 444
CS +CFS + K
Sbjct: 296 LGKTELFCSINCFSAYSKAK 315
>gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens]
Length = 669
Score = 161 bits (408), Expect = 3e-39
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 308 KMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSV 367
K+TCA+C+ PLQKGQTAYQRKG LFCS++CL++FS K + CKK+ K +V
Sbjct: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
Query: 368 VAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLHEVSNGSV 427
+ S SF EF ++ CLS E + +RC+IC K E+ HEVS +V
Sbjct: 301 ILPVESSKSFQEFYSTSCLSPCENNWN----LKKGVFNKSRCTICSKLAEIRHEVSVNNV 356
Query: 428 VHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFCNTTCLGA 487
H+LCS+ CF+K+R GL NCC+ CG Y+ +K S G +L GQQKRFC +C+
Sbjct: 357 THKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSK--STGNNILVIGGQQKRFCCQSCINE 414
Query: 488 YKK 490
YK+
Sbjct: 415 YKQ 417
Score = 51.6 bits (122), Expect = 5e-06
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 473 EGQQKRFCNTTCLGAYKKKNTRVYPCVWCK--TLCKNFEMLSHVDRNGKTSLF----CSL 526
+G FC+TTCL ++ K T+ + CK K ++ V+ + F C
Sbjct: 261 KGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLS 320
Query: 527 CCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGG 586
C ++ +K+ G+ R C+ C + L++ + V+ ++ CS C+ K++ + G
Sbjct: 321 PCENNWNLKK-GVFNKSR-CTICSK-LAEIRHEVSVNNVTHKLCSNHCFNKYRLAN--GL 375
Query: 587 IHLSCHYCHSLFSGKP---EVLDWQDQVFQFCCRDCCEDFKRL 626
I C +C K +L Q +FCC+ C ++K++
Sbjct: 376 IMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQM 418
Score = 42.4 bits (98), Expect = 0.003
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 516 RNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLS----DPCYYNKVDRTVYQFCS 571
R G LFCS C +S+ K+ T C++ S + + ++ +F S
Sbjct: 260 RKGSAHLFCSTTCLSSFSHKRTQNT----RSIICKKDASTKKANVILPVESSKSFQEFYS 315
Query: 572 PSCWTKFQR--TSPEGGIHLS-CHYCHSLFSGKPEVLDWQDQVFQFCCRDCCEDFKRLRG 628
SC + + +G + S C C L + EV + + C C ++ G
Sbjct: 316 TSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEV-SVNNVTHKLCSNHCFNKYRLANG 374
Query: 629 VVSQ-CEHCRQ----EKLLHEKLRFSGVEKSFCSEGCVLLYKQ 666
++ CEHC + + + L G +K FC + C+ YKQ
Sbjct: 375 LIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417
Score = 36.6 bits (83), Expect = 0.17
Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 37/224 (16%)
Query: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKS-----FCSEGCVLLYKQDF 668
FC C F R ++ C+++ + VE S F S C+ + ++
Sbjct: 267 FCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNW 326
Query: 669 TKKLGLCCIT-CTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQG 727
K G+ + CT CS+ + ++ T CS C +KY L C C+ G
Sbjct: 327 NLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNC--CEHCG 384
Query: 728 KLLET-------IHWRGQIRHFCNQQCLLRF------------YSQQNQPNLDTQSGPES 768
+ + + + GQ + FC Q C+ + S+ + N + +
Sbjct: 385 EYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQ 444
Query: 769 LLNSQS---------PESKPQTPS-QTKVENSNTVRTPEENGNL 802
L S + PE K +T Q VE +EN NL
Sbjct: 445 LYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLLIQENVNL 488
Score = 30.8 bits (68), Expect = 9.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 677 ITCTYCSQTCQRGVTE-QLDGSTWDFCSEDCKSKYLLWYCKAARCHACKR 725
ITC C + Q+G T Q GS FCS C S + + R CK+
Sbjct: 242 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKK 291
>gi|89001100 zinc finger protein 237 isoform 1 [Homo sapiens]
Length = 382
Score = 90.5 bits (223), Expect = 1e-17
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 308 KMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSV 367
K+TCA+C+ PLQKGQTAYQRKG LFCS++CL++FS K + CKK+ K +V
Sbjct: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
Query: 368 VAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEV 418
+ S SF EF ++ CLS E + +RC+IC K EV
Sbjct: 301 ILPVESSKSFQEFYSTSCLSPCENNWN----LKKGVFNKSRCTICSKLAEV 347
Score = 30.8 bits (68), Expect = 9.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 677 ITCTYCSQTCQRGVTE-QLDGSTWDFCSEDCKSKYLLWYCKAARCHACKR 725
ITC C + Q+G T Q GS FCS C S + + R CK+
Sbjct: 242 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKK 291
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 63.2 bits (152), Expect = 2e-09
Identities = 66/234 (28%), Positives = 90/234 (38%), Gaps = 38/234 (16%)
Query: 32 EDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS 91
ED+ + ++ P GPSP G + P G PG G GG + P
Sbjct: 21 EDVSQEESPSLIAGNPQGPSPQGG-----NKPQGPPPPPGKPQGPPP---QGGNKPQGPP 72
Query: 92 PPEVDHGPEGTLAWDAGDQTLEP--------GP---GGQTPEVVPPDPGAGANSCSPEGL 140
PP GP GD++ P GP GG P+ PP PG P+G
Sbjct: 73 PPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK-PQGPPPQGG 126
Query: 141 LEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEE-ELPQG--QPQSPNAPPSPSVGE 197
P P P Q P + +++ S R PG+ + PQG QPQ P PP G
Sbjct: 127 NRPQGPPPPGKPQGPPPQGDKSRS----PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 182
Query: 198 TLGDGINSSQTKPGGSSPPAHP-SLPGDGLTAKASEKPPERKRSERVRRAEPPK 250
G KP G PP P P G +++S+ PP + + + P+
Sbjct: 183 PPQGG-----KKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ 231
Score = 55.5 bits (132), Expect = 4e-07
Identities = 59/220 (26%), Positives = 76/220 (34%), Gaps = 48/220 (21%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
P GP P G + P G PG G GG + P PP GP
Sbjct: 97 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNRPQGPPPPGKPQGPP-----P 143
Query: 107 AGDQTLEP--------GP---GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSP 155
GD++ P GP GG P+ PP PG P+G +P P P Q P
Sbjct: 144 QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGKKPQGPPPPGKPQGP 202
Query: 156 HIEEEETTSIATAR---RGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGG 212
+ +++ S + +G P Q PQG P P P P KP G
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP---------QGGNKPQG 253
Query: 213 SSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
PP P P P + + R+ P KP+
Sbjct: 254 PPPPGKPQGP-----------PAQGGSKSQSARSPPGKPQ 282
Score = 53.1 bits (126), Expect = 2e-06
Identities = 52/185 (28%), Positives = 71/185 (38%), Gaps = 25/185 (13%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGP--EGTLA 104
P GP P G + P G PG G GG + P PP GP +G +
Sbjct: 158 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGKKPQGPPPPGKPQGPPPQGDKS 209
Query: 105 WDAGDQTLEP-GP---GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE 160
+ +P GP GG P+ PP PG P+G +P P P Q P
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGP---PA 265
Query: 161 ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS 220
+ S + + R PG+ + PQ + +P PP P+ G N Q + + P P
Sbjct: 266 QGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG-------NPQQPQAPPAGQPQGPP 318
Query: 221 LPGDG 225
P G
Sbjct: 319 RPPQG 323
Score = 47.4 bits (111), Expect = 1e-04
Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 114 PGP-GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGS 172
P P GG P+ PP PG P+G +P P P Q P + +++ S R
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQGDKSRS----PRSP 93
Query: 173 PGQEE-ELPQG--QPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAK 229
PG+ + PQG QPQ P PP G G +P G PP P P
Sbjct: 94 PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG-----NRPQGPPPPGKPQGP------- 141
Query: 230 ASEKPPERKRSERVRRAEPPKPE 252
PP+ +S R R+ P KP+
Sbjct: 142 ----PPQGDKS-RSPRSPPGKPQ 159
Score = 35.4 bits (80), Expect = 0.38
Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 21/109 (19%)
Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGI 203
LA S L +EE + IA +G Q PQG P P P P
Sbjct: 11 LALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP--------- 61
Query: 204 NSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
KP G PP P P PP+ +S R R+ P KP+
Sbjct: 62 PQGGNKPQGPPPPGKPQGP-----------PPQGDKS-RSPRSPPGKPQ 98
Score = 32.0 bits (71), Expect = 4.2
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 25/95 (26%)
Query: 771 NSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK- 829
+SQSP KPQ P P + GN P P PPP P P +
Sbjct: 211 SSQSPPGKPQGP-------------PPQGGN----------QPQGPPPPPGKPQGPPPQG 247
Query: 830 -NKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
NK P + +G + KS+ +++ KPQ
Sbjct: 248 GNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQ 282
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 60.8 bits (146), Expect = 8e-09
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 45/228 (19%)
Query: 38 QTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH 97
Q P+ P GP P G + P G PG G GG + P PP
Sbjct: 48 QGPPSPPGKPQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGKPQ 99
Query: 98 GPEGTLAWDAGDQTLEP--------GP---GGQTPEVVPPDPGAGANSCSPEGLLEPLAP 146
GP GD++ P GP GG P+ PP PG P+G +P P
Sbjct: 100 GPP-----PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGP 153
Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEEELPQG--QPQSPNAPPSPSVGETLGDGIN 204
P Q P + + + + + G P + PQG QPQ P PP G G
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKP--QGPPPQGGNQPQGPPPPPGKPQGPPPQGG-- 209
Query: 205 SSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
KP G PP P P PP+ + R+ P KP+
Sbjct: 210 ---NKPQGPPPPGKPQGP-----------PPQGDNKSQSARSPPGKPQ 243
Score = 60.1 bits (144), Expect = 1e-08
Identities = 61/215 (28%), Positives = 75/215 (34%), Gaps = 36/215 (16%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGP------- 99
P GP P G + P G PG G GG + P PP GP
Sbjct: 118 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGKPQGPPPQGDNK 169
Query: 100 EGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEE 159
+ G P GG P+ PP PG P+G +P P P Q P +
Sbjct: 170 SRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQG 228
Query: 160 EETTSIATARRGSPGQEEELPQG--QPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPA 217
+ + A + G P + PQG QPQ P PP G G KP G PP
Sbjct: 229 DNKSQSARSPPGKP--QGPPPQGGNQPQGPPPPPGKPQGPPPQGG-----NKPQGPPPPG 281
Query: 218 HPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
P P PP+ R R+ P KP+
Sbjct: 282 KPQGP-----------PPQGGSKSRSSRSPPGKPQ 305
Score = 58.5 bits (140), Expect = 4e-08
Identities = 62/216 (28%), Positives = 76/216 (35%), Gaps = 38/216 (17%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGP------- 99
P GP P G + P G PG G GG + P PP GP
Sbjct: 180 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGKPQGPPPQGDNK 231
Query: 100 EGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEE 159
+ G P GG P+ PP PG P+G +P P P Q P
Sbjct: 232 SQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGP---P 287
Query: 160 EETTSIATARRGSPGQEE-ELPQG--QPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPP 216
+ S + + R PG+ + PQG QPQ P PP G G KP G PP
Sbjct: 288 PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG-----NKPQGPPPP 342
Query: 217 AHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
P P PP+ R R+ P KP+
Sbjct: 343 GKPQGP-----------PPQGGSKSRSARSPPGKPQ 367
Score = 55.1 bits (131), Expect = 5e-07
Identities = 53/197 (26%), Positives = 72/197 (36%), Gaps = 26/197 (13%)
Query: 36 ESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV 95
+SQ+A + P GP P G + P G PG G GG + P PP
Sbjct: 231 KSQSARSPPGKPQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGK 282
Query: 96 DHGPEGTLAWDAGDQTLEPGP-------GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
GP + PG GG P+ PP PG P+G +P P
Sbjct: 283 PQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPP 341
Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQT 208
P Q P + S + + R PG+ + PQ + +P PP P+ G N Q
Sbjct: 342 PGKPQGP---PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGG-------NPQQP 391
Query: 209 KPGGSSPPAHPSLPGDG 225
+ + P P P G
Sbjct: 392 QAPPAGQPQGPPRPPQG 408
Score = 44.3 bits (103), Expect = 8e-04
Identities = 47/169 (27%), Positives = 60/169 (35%), Gaps = 43/169 (25%)
Query: 107 AGDQTLEPGPGGQTPEVVPPDPG-------AGANSCS-------------PEGLLEPLAP 146
AG+ P GG P+ P PG G N P+G +P P
Sbjct: 33 AGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 92
Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEE-ELPQG--QPQSPNAPPSPSVGETLGDGI 203
P Q P + +++ S R PG+ + PQG QPQ P PP G G
Sbjct: 93 PPPGKPQGPPPQGDKSRS----PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG- 147
Query: 204 NSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
KP G PP P P PP+ R R+ P KP+
Sbjct: 148 ----NKPQGPPPPGKPQGP-----------PPQGDNKSRSSRSPPGKPQ 181
Score = 40.8 bits (94), Expect = 0.009
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPS-PSVGETLGDG 202
LA S L +EE + IA +G+P Q PQG P P P P G G
Sbjct: 11 LALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQG 70
Query: 203 INSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
KP G P G K PP+ +S R R+ P KP+
Sbjct: 71 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKS-RSPRSPPGKPQ 119
Score = 34.7 bits (78), Expect = 0.65
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
P KPQ P S + R+P G P + + P P PPP P P + NK
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 274
Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
P + +G + KS+ S++ KPQ
Sbjct: 275 QGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ 305
Score = 33.5 bits (75), Expect = 1.4
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
P KPQ P S + R+P G P + + P P PPP P P + NK
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
P + +G + + KS+ +++ KPQ
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQ 243
Score = 32.7 bits (73), Expect = 2.5
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
P KPQ P + + S + R+P G P + + P P PPP P P + NK
Sbjct: 94 PPGKPQGPPP-QGDKSRSPRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150
Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
P + +G + + KS+ S++ KPQ
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQ 181
Score = 32.7 bits (73), Expect = 2.5
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
P KPQ P S + R+P G P + + P P PPP P P + NK
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 336
Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
P + +G + KS+ +++ KPQ
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSPPGKPQ 367
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 54.3 bits (129), Expect = 8e-07
Identities = 51/194 (26%), Positives = 72/194 (37%), Gaps = 24/194 (12%)
Query: 32 EDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS 91
ED+ + ++ P GPSP G + P G PG G GG + P
Sbjct: 21 EDVSQEESPSLIAGNPQGPSPQGG-----NKPQGPPPPPGKPQGPPPQ---GGNKPQGPP 72
Query: 92 PPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPIT 151
PP GP GD++ P P+ PP G P+G +P P P
Sbjct: 73 PPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQ-GGKPQGPPPQGGNKPQGPPPPGK 126
Query: 152 LQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPG 211
Q P + S + + R PG+ + PQ + +P PP P+ G N Q +
Sbjct: 127 PQGP---PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG-------NPQQPQAP 176
Query: 212 GSSPPAHPSLPGDG 225
+ P P P G
Sbjct: 177 PAGQPQGPPRPPQG 190
Score = 35.8 bits (81), Expect = 0.29
Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGI 203
LA S L +EE + IA +G Q PQG P P P P
Sbjct: 11 LALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP--------- 61
Query: 204 NSSQTKPGGSSPPAHP-SLPGDGLTAKASEKPPERKRSERVRRAEPPKP 251
KP G PP P P G +++ PP + + + +P P
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP 110
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 52.0 bits (123), Expect = 4e-06
Identities = 64/225 (28%), Positives = 86/225 (38%), Gaps = 45/225 (20%)
Query: 85 LLYKAPSPPEVDHGPEGTLAWDAG------DQTLEPGPGGQTPEVVP-PDPGAGANSCSP 137
++ AP PP D P +A AG D P P Q P P PG ++ P
Sbjct: 722 VIVSAP-PPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLP 780
Query: 138 EGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPS----- 192
PL DSP L SPH P + P +PQS + PPS
Sbjct: 781 HQA--PLG-DSP-HLPSPH----------------PTRPPSRPPSRPQSVSRPPSEPPLH 820
Query: 193 ----PSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEP 248
P TL GI Q + G P ++P+ TA +PP R +S+ P
Sbjct: 821 PCPPPQAPPTL-PGIFVIQNQLGVPPPASNPAP-----TAPGPPQPPLRPQSQPPEGPLP 874
Query: 249 PKPEV-VDSTESIPVSDEDSDAMVDDPNDEDF-VPFRPRRSPRMS 291
P P + ST S S ++ + + P DF + F P + P S
Sbjct: 875 PAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKS 919
Score = 44.3 bits (103), Expect = 8e-04
Identities = 64/272 (23%), Positives = 96/272 (35%), Gaps = 44/272 (16%)
Query: 18 KPLAGDLPVDMEFGEDLLESQTAPTRGWAPP---GPSPSSGALDLLDTPAGL-------- 66
+P +PV + G +SQ AP A G + A+ +L+TP GL
Sbjct: 551 QPALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAA 610
Query: 67 -----------EKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPG 115
+ P + L LG +A PP+ P A T +P
Sbjct: 611 ATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQA---PTPQAAAPPQATTPQPS 667
Query: 116 PG-GQTPE--VVPPDPGAGANSCSPEGLLEPLAPDS----PITLQSPHIEEEETTSI--- 165
PG +PE V+ P A + + L+ P P++ + PH+ + +
Sbjct: 668 PGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAP 727
Query: 166 --------ATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPA 217
AT G + P Q AP P+ G G +SS + P +
Sbjct: 728 PPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGD 787
Query: 218 HPSLPGDGLTAKASEKPPERKRSERVRRAEPP 249
P LP T S +PP R +S +EPP
Sbjct: 788 SPHLPSPHPTRPPS-RPPSRPQSVSRPPSEPP 818
Score = 33.9 bits (76), Expect = 1.1
Identities = 39/140 (27%), Positives = 51/140 (36%), Gaps = 25/140 (17%)
Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPP------PPATPR 828
P++ P P ++N LG P + APTAP PP PP PP P
Sbjct: 825 PQAPPTLPGIFVIQNQ-----------LGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPL 873
Query: 829 KNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVP---MHLYCQK 885
A P + V+ E S+ Q+ P P P P +HL
Sbjct: 874 P-PAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHL---- 928
Query: 886 VPVPFSMPIPVPVPMFLPTT 905
VP P + P P P + TT
Sbjct: 929 VPEPAAPPPPPPRTFQMVTT 948
Score = 33.5 bits (75), Expect = 1.4
Identities = 38/168 (22%), Positives = 61/168 (36%), Gaps = 20/168 (11%)
Query: 765 GPESLLNSQSPESKPQTPSQTKVENSNTVRTPE--ENGNLGKIPVKTRSAPTAPTPPPPP 822
GP++ + SP PQ P+ ++ +P LG +P P+P P
Sbjct: 746 GPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLG-------DSPHLPSPHPTR 798
Query: 823 PPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIV----LPIPVPIFVPVP 878
PP+ P ++ +P + C Q P + V L +P P P P
Sbjct: 799 PPSRPPSRPQSVSRPPSEPPLHPC------PPPQAPPTLPGIFVIQNQLGVPPPASNPAP 852
Query: 879 MHLYCQKVPV-PFSMPIPVPVPMFLPTTLESTDKIVETIEELKVKIPS 925
+ P+ P S P P+P ST V + E ++P+
Sbjct: 853 TAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPA 900
Score = 32.0 bits (71), Expect = 4.2
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 125 PPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP-QGQ 183
PP P S PEG L P P + S ET+S A S Q + P QG
Sbjct: 857 PPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGP 916
Query: 184 PQSPNAPPS 192
+SP PP+
Sbjct: 917 HKSPTPPPT 925
Score = 30.8 bits (68), Expect = 9.3
Identities = 57/258 (22%), Positives = 80/258 (31%), Gaps = 32/258 (12%)
Query: 10 FDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGAL-----DLLDTPA 64
F P ++PL+ + P + ++ S P + AP P L D +PA
Sbjct: 699 FLPQERSQQPLSAEGP-HLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPA 757
Query: 65 GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVV 124
+ P A L G G S P + H GD P P P
Sbjct: 758 PAPQIPA----AAPLKGPG-----PSSSPSLPHQAP------LGDSPHLPSPHPTRPPSR 802
Query: 125 PPDPGAGANSCSPEGLLEPLAP-DSPITLQSPHIEEEET-----TSIATARRGSPGQEEE 178
PP + E L P P +P TL + + + S P Q
Sbjct: 803 PPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPL 862
Query: 179 LPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS-----LPGDGLTAKASEK 233
PQ QP PP+P + + +S ++ P PS P K+
Sbjct: 863 RPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTP 922
Query: 234 PPERKRSERVRRAEPPKP 251
PP PP P
Sbjct: 923 PPTLHLVPEPAAPPPPPP 940
>gi|55741647 hypothetical protein LOC158405 [Homo sapiens]
Length = 716
Score = 52.0 bits (123), Expect = 4e-06
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 1066 YGVNAWKCWVQSKYANGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRP 1125
Y +N W+ W + T DI A +LN L F + +
Sbjct: 426 YALNVWRYWCMTNGLKDHT-----------------DITKIPAVKLNELLENFYVTVKKS 468
Query: 1126 NGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLP---- 1181
+G + S++ + G+ + +L+N + T + + ++L + L +
Sbjct: 469 DGSDFLATSLHAIRRGLDR-ILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARS 527
Query: 1182 -NNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNV 1236
N FS +EE +W+ LG SP LL+T++ +N+++ ++T +EH L + ++
Sbjct: 528 RNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDI 583
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 50.4 bits (119), Expect = 1e-05
Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 50/237 (21%)
Query: 31 GEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYK- 88
G L ++ P G P PGP P G PAG PG A L G LL
Sbjct: 162 GPAALAARAGPGPGPGPGPGPGPGPGK------PAG----PGA---AQTLNGSAALLNSH 208
Query: 89 ---APSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVV----PPDPGAGANSCSPE--- 138
AP+ V++GP L + PG QTP V PP P A + +P
Sbjct: 209 HAAAPAVSLVNNGPAALLPLP---KPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAA 265
Query: 139 -GLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGE 197
P P +P TL P PG P G P + A P P+ +
Sbjct: 266 PAAAPPPPPPAPATLARP-----------------PGH----PAGPPTAAPAVPPPAAAQ 304
Query: 198 TLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVV 254
G + P P PG G A A + + +RV +A PP + +
Sbjct: 305 NGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTL 361
Score = 31.2 bits (69), Expect = 7.1
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 764 SGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTP----- 818
+GP +LL P KP P ++TP G S P AP P
Sbjct: 220 NGPAALL----PLPKPAAPG-------TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA 268
Query: 819 -PPPPPPA 825
PPPPPPA
Sbjct: 269 APPPPPPA 276
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 50.4 bits (119), Expect = 1e-05
Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 29/198 (14%)
Query: 48 PGPSPSSGALDLLDTPAG---LEKDPGVLDGATELLGLGGLLYKAPSP--PEVDHGPEGT 102
PGP +G P G L PG+ + L G L P P P G +GT
Sbjct: 763 PGPPGRAG-------PPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGT 815
Query: 103 LAWDA--GDQTLEPGPGGQTPEVVPPDPG----AGANSCSPEGLLEPLAPDSPITLQSPH 156
D GD + PG P+ P PG G G P P P P
Sbjct: 816 PGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPS 875
Query: 157 IEEEETTSIATARRGSPGQEEEL--PQGQPQSPNAPPSPSV-GETLGDGINSSQTK---- 209
++ T I G G E L P+G P P P P + GE G+NSS
Sbjct: 876 FRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAG 935
Query: 210 ----PGGSSPPAHPSLPG 223
PG PP P LPG
Sbjct: 936 LPGVPGREGPPGFPGLPG 953
Score = 44.3 bits (103), Expect = 8e-04
Identities = 56/230 (24%), Positives = 74/230 (32%), Gaps = 53/230 (23%)
Query: 47 PPGPSPSSGALDLLDTPA--------GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHG 98
PPGP G + P GL+ + G A+ G+ G+ P P G
Sbjct: 1207 PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGM--PGPPGPPGPPG 1264
Query: 99 PEGTLAWDAG--DQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPH 156
P GT +D+ ++ PGP G PP P P P P
Sbjct: 1265 PPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGP--------PGPPGQFPFDF 1316
Query: 157 IEEEETTSIATARRGSPGQEEELPQGQP----------QSPNAPPSPS--------VGET 198
++ E RG GQ+ E +G+P P PP P GE+
Sbjct: 1317 LQLEAEMKGEKGDRGDAGQKGE--RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGES 1374
Query: 199 L-------------GDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPP 235
+ G G Q PG PP PS PG + PP
Sbjct: 1375 IRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPP 1424
Score = 43.1 bits (100), Expect = 0.002
Identities = 69/252 (27%), Positives = 90/252 (35%), Gaps = 56/252 (22%)
Query: 7 PSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAG 65
P+P P+T P PLAG + E++ E T + G PG S + TP G
Sbjct: 690 PAP-PPVTTP--PLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGG 746
Query: 66 LEKDPGVLDGATELLGLGGLLYKA--------PSPPEVDH-----GPEGTLAWDAGDQTL 112
K+ G L G G+ G +A P PP + GP G
Sbjct: 747 RVKEGG-LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQG 805
Query: 113 EPGPGGQ--TP--EVVPPDPGAGAN--SCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
PGP G+ TP + P DPG P+G P +P +
Sbjct: 806 PPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGF-----PGTPGDVGPK----------- 849
Query: 167 TARRGSPGQEEELPQGQPQSPNAPPSPSV-----------GETLG---DGINSSQTKPGG 212
+G PG E P G PQ P PP PS G G + + + PG
Sbjct: 850 -GDKGDPGVGERGPPG-PQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGP 907
Query: 213 SSPPAHPSLPGD 224
PP P LPG+
Sbjct: 908 PGPPGVPGLPGE 919
Score = 37.0 bits (84), Expect = 0.13
Identities = 50/197 (25%), Positives = 63/197 (31%), Gaps = 41/197 (20%)
Query: 31 GEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAP 90
GE L P PPGP G PG+ G ++ G GG +
Sbjct: 995 GESGLAGAPGPAGPPGPPGPPGPPG--------------PGLPAGFDDMEGSGGPFWSTA 1040
Query: 91 SPPEVDHGPEGT--LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
+ GP G L D G L G + VP PG EG+ P P
Sbjct: 1041 RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGR----EGIAGPQGPKG 1096
Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPN--APPSPSVGETLGDGINSS 206
+ +G PG++ GQP P PP P V + DG S
Sbjct: 1097 DRG--------------SRGEKGDPGKDGV---GQPGLPGPPGPPGPVVYVSEQDG--SV 1137
Query: 207 QTKPGGSSPPAHPSLPG 223
+ PG P PG
Sbjct: 1138 LSVPGPEGRPGFAGFPG 1154
Score = 34.7 bits (78), Expect = 0.65
Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 34/185 (18%)
Query: 47 PPGPSPSSGALDLLDTP-AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH--GPEGTL 103
PPGPS L +D +G D L G G P PP V G G
Sbjct: 871 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPG-------PPGPPGVPGLPGEPGRF 923
Query: 104 AWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
++ D PGP G +P PG P G P P + P +
Sbjct: 924 GVNSSDV---PGPAG-----LPGVPGREG----PPGFPGLPGPPGPPGREGPPGRTGQKG 971
Query: 164 SIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG 223
S+ A G+PG + G +P P+ + GE+ G+ + G PP P PG
Sbjct: 972 SLGEA--GAPGHK-----GSKGAPG--PAGARGES---GLAGAPGPAGPPGPPGPPGPPG 1019
Query: 224 DGLTA 228
GL A
Sbjct: 1020 PGLPA 1024
>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
sapiens]
Length = 1336
Score = 50.4 bits (119), Expect = 1e-05
Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 29/198 (14%)
Query: 48 PGPSPSSGALDLLDTPAG---LEKDPGVLDGATELLGLGGLLYKAPSP--PEVDHGPEGT 102
PGP +G P G L PG+ + L G L P P P G +GT
Sbjct: 348 PGPPGRAG-------PPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGT 400
Query: 103 LAWDA--GDQTLEPGPGGQTPEVVPPDPG----AGANSCSPEGLLEPLAPDSPITLQSPH 156
D GD + PG P+ P PG G G P P P P
Sbjct: 401 PGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPS 460
Query: 157 IEEEETTSIATARRGSPGQEEEL--PQGQPQSPNAPPSPSV-GETLGDGINSSQTK---- 209
++ T I G G E L P+G P P P P + GE G+NSS
Sbjct: 461 FRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAG 520
Query: 210 ----PGGSSPPAHPSLPG 223
PG PP P LPG
Sbjct: 521 LPGVPGREGPPGFPGLPG 538
Score = 44.3 bits (103), Expect = 8e-04
Identities = 56/230 (24%), Positives = 74/230 (32%), Gaps = 53/230 (23%)
Query: 47 PPGPSPSSGALDLLDTPA--------GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHG 98
PPGP G + P GL+ + G A+ G+ G+ P P G
Sbjct: 792 PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGM--PGPPGPPGPPG 849
Query: 99 PEGTLAWDAG--DQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPH 156
P GT +D+ ++ PGP G PP P P P P
Sbjct: 850 PPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGP--------PGPPGQFPFDF 901
Query: 157 IEEEETTSIATARRGSPGQEEELPQGQP----------QSPNAPPSPS--------VGET 198
++ E RG GQ+ E +G+P P PP P GE+
Sbjct: 902 LQLEAEMKGEKGDRGDAGQKGE--RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGES 959
Query: 199 L-------------GDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPP 235
+ G G Q PG PP PS PG + PP
Sbjct: 960 IRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPP 1009
Score = 43.1 bits (100), Expect = 0.002
Identities = 69/252 (27%), Positives = 90/252 (35%), Gaps = 56/252 (22%)
Query: 7 PSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAG 65
P+P P+T P PLAG + E++ E T + G PG S + TP G
Sbjct: 275 PAP-PPVTTP--PLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGG 331
Query: 66 LEKDPGVLDGATELLGLGGLLYKA--------PSPPEVDH-----GPEGTLAWDAGDQTL 112
K+ G L G G+ G +A P PP + GP G
Sbjct: 332 RVKEGG-LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQG 390
Query: 113 EPGPGGQ--TP--EVVPPDPGAGAN--SCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
PGP G+ TP + P DPG P+G P +P +
Sbjct: 391 PPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGF-----PGTPGDVGPK----------- 434
Query: 167 TARRGSPGQEEELPQGQPQSPNAPPSPSV-----------GETLG---DGINSSQTKPGG 212
+G PG E P G PQ P PP PS G G + + + PG
Sbjct: 435 -GDKGDPGVGERGPPG-PQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGP 492
Query: 213 SSPPAHPSLPGD 224
PP P LPG+
Sbjct: 493 PGPPGVPGLPGE 504
Score = 37.0 bits (84), Expect = 0.13
Identities = 50/197 (25%), Positives = 63/197 (31%), Gaps = 41/197 (20%)
Query: 31 GEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAP 90
GE L P PPGP G PG+ G ++ G GG +
Sbjct: 580 GESGLAGAPGPAGPPGPPGPPGPPG--------------PGLPAGFDDMEGSGGPFWSTA 625
Query: 91 SPPEVDHGPEGT--LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
+ GP G L D G L G + VP PG EG+ P P
Sbjct: 626 RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGR----EGIAGPQGPKG 681
Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPN--APPSPSVGETLGDGINSS 206
+ +G PG++ GQP P PP P V + DG S
Sbjct: 682 DRG--------------SRGEKGDPGKDGV---GQPGLPGPPGPPGPVVYVSEQDG--SV 722
Query: 207 QTKPGGSSPPAHPSLPG 223
+ PG P PG
Sbjct: 723 LSVPGPEGRPGFAGFPG 739
Score = 34.7 bits (78), Expect = 0.65
Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 34/185 (18%)
Query: 47 PPGPSPSSGALDLLDTP-AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH--GPEGTL 103
PPGPS L +D +G D L G G P PP V G G
Sbjct: 456 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPG-------PPGPPGVPGLPGEPGRF 508
Query: 104 AWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
++ D PGP G +P PG P G P P + P +
Sbjct: 509 GVNSSDV---PGPAG-----LPGVPGREG----PPGFPGLPGPPGPPGREGPPGRTGQKG 556
Query: 164 SIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG 223
S+ A G+PG + G +P P+ + GE+ G+ + G PP P PG
Sbjct: 557 SLGEA--GAPGHK-----GSKGAPG--PAGARGES---GLAGAPGPAGPPGPPGPPGPPG 604
Query: 224 DGLTA 228
GL A
Sbjct: 605 PGLPA 609
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 50.4 bits (119), Expect = 1e-05
Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 29/198 (14%)
Query: 48 PGPSPSSGALDLLDTPAG---LEKDPGVLDGATELLGLGGLLYKAPSP--PEVDHGPEGT 102
PGP +G P G L PG+ + L G L P P P G +GT
Sbjct: 528 PGPPGRAG-------PPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGT 580
Query: 103 LAWDA--GDQTLEPGPGGQTPEVVPPDPG----AGANSCSPEGLLEPLAPDSPITLQSPH 156
D GD + PG P+ P PG G G P P P P
Sbjct: 581 PGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPS 640
Query: 157 IEEEETTSIATARRGSPGQEEEL--PQGQPQSPNAPPSPSV-GETLGDGINSSQTK---- 209
++ T I G G E L P+G P P P P + GE G+NSS
Sbjct: 641 FRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAG 700
Query: 210 ----PGGSSPPAHPSLPG 223
PG PP P LPG
Sbjct: 701 LPGVPGREGPPGFPGLPG 718
Score = 44.3 bits (103), Expect = 8e-04
Identities = 56/230 (24%), Positives = 74/230 (32%), Gaps = 53/230 (23%)
Query: 47 PPGPSPSSGALDLLDTPA--------GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHG 98
PPGP G + P GL+ + G A+ G+ G+ P P G
Sbjct: 972 PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGM--PGPPGPPGPPG 1029
Query: 99 PEGTLAWDAG--DQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPH 156
P GT +D+ ++ PGP G PP P P P P
Sbjct: 1030 PPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGP--------PGPPGQFPFDF 1081
Query: 157 IEEEETTSIATARRGSPGQEEELPQGQP----------QSPNAPPSPS--------VGET 198
++ E RG GQ+ E +G+P P PP P GE+
Sbjct: 1082 LQLEAEMKGEKGDRGDAGQKGE--RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGES 1139
Query: 199 L-------------GDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPP 235
+ G G Q PG PP PS PG + PP
Sbjct: 1140 IRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPP 1189
Score = 43.1 bits (100), Expect = 0.002
Identities = 69/252 (27%), Positives = 90/252 (35%), Gaps = 56/252 (22%)
Query: 7 PSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAG 65
P+P P+T P PLAG + E++ E T + G PG S + TP G
Sbjct: 455 PAP-PPVTTP--PLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGG 511
Query: 66 LEKDPGVLDGATELLGLGGLLYKA--------PSPPEVDH-----GPEGTLAWDAGDQTL 112
K+ G L G G+ G +A P PP + GP G
Sbjct: 512 RVKEGG-LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQG 570
Query: 113 EPGPGGQ--TP--EVVPPDPGAGAN--SCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
PGP G+ TP + P DPG P+G P +P +
Sbjct: 571 PPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGF-----PGTPGDVGPK----------- 614
Query: 167 TARRGSPGQEEELPQGQPQSPNAPPSPSV-----------GETLG---DGINSSQTKPGG 212
+G PG E P G PQ P PP PS G G + + + PG
Sbjct: 615 -GDKGDPGVGERGPPG-PQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGP 672
Query: 213 SSPPAHPSLPGD 224
PP P LPG+
Sbjct: 673 PGPPGVPGLPGE 684
Score = 37.0 bits (84), Expect = 0.13
Identities = 50/197 (25%), Positives = 63/197 (31%), Gaps = 41/197 (20%)
Query: 31 GEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAP 90
GE L P PPGP G PG+ G ++ G GG +
Sbjct: 760 GESGLAGAPGPAGPPGPPGPPGPPG--------------PGLPAGFDDMEGSGGPFWSTA 805
Query: 91 SPPEVDHGPEGT--LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
+ GP G L D G L G + VP PG EG+ P P
Sbjct: 806 RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGR----EGIAGPQGPKG 861
Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPN--APPSPSVGETLGDGINSS 206
+ +G PG++ GQP P PP P V + DG S
Sbjct: 862 DRG--------------SRGEKGDPGKDGV---GQPGLPGPPGPPGPVVYVSEQDG--SV 902
Query: 207 QTKPGGSSPPAHPSLPG 223
+ PG P PG
Sbjct: 903 LSVPGPEGRPGFAGFPG 919
Score = 34.7 bits (78), Expect = 0.65
Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 34/185 (18%)
Query: 47 PPGPSPSSGALDLLDTP-AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH--GPEGTL 103
PPGPS L +D +G D L G G P PP V G G
Sbjct: 636 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPG-------PPGPPGVPGLPGEPGRF 688
Query: 104 AWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
++ D PGP G +P PG P G P P + P +
Sbjct: 689 GVNSSDV---PGPAG-----LPGVPGREG----PPGFPGLPGPPGPPGREGPPGRTGQKG 736
Query: 164 SIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG 223
S+ A G+PG + G +P P+ + GE+ G+ + G PP P PG
Sbjct: 737 SLGEA--GAPGHK-----GSKGAPG--PAGARGES---GLAGAPGPAGPPGPPGPPGPPG 784
Query: 224 DGLTA 228
GL A
Sbjct: 785 PGLPA 789
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 50.4 bits (119), Expect = 1e-05
Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 29/173 (16%)
Query: 409 CSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPE 468
C+ CQK G + +S GS V CS+ CF+ R + D+ G
Sbjct: 151 CAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFKRNKARDEDGHA----------- 199
Query: 469 LLFHEGQQKRFCNTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCC 528
Q+ + T A+K N + C WCK + E L D + FCS C
Sbjct: 200 ---ENFPQQHYAKETPRLAFKN-NCELLVCDWCKHIRHTKEYLDFGDGERRLQ-FCSAKC 254
Query: 529 TTSYKV------KQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCW 575
YK+ QA L P C S P NK + T Q +P W
Sbjct: 255 LNQYKMDIFYKETQANL-----PAGLC--STLHPPMENKAEGTGVQLLTPDSW 300
Score = 40.8 bits (94), Expect = 0.009
Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 21/144 (14%)
Query: 766 PESLLNSQSPESKPQTPS----QTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPP- 820
P N SP S P P N +P L + S PT P PP
Sbjct: 416 PHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSP-HIHPPSTPTMPGNPPG 474
Query: 821 ---PPPPATPRKN----------KAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVL 867
PPPP P + M P M N G+ + + + P ++ L
Sbjct: 475 LLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPY-PVIVPL 533
Query: 868 PIPVPIFVPVPMHLYCQKVPVPFS 891
P+P+PI +P+P H+ K P FS
Sbjct: 534 PVPIPIPIPIP-HVSDSKPPNGFS 556
Score = 33.9 bits (76), Expect = 1.1
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 799 NGNLGKIPVKTRSAPTAPT-PPPPPPPATPRK 829
NG G +SA P PPPPPPPA P+K
Sbjct: 725 NGTRGAAAEGAKSAEPPPEQPPPPPPPAPPKK 756
Score = 32.7 bits (73), Expect = 2.5
Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 59/289 (20%)
Query: 633 CEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLGLCCITCTYCSQTCQRGVTE 692
C C++ + L KSFCSE C ++ + K R
Sbjct: 151 CAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFK-----------------RNKAR 193
Query: 693 QLDGSTWDFCSED-CKSKYLLWY---CKAARCHACKRQGKLLETIHWRGQIR--HFCNQQ 746
DG +F + K L + C+ C CK E + + R FC+ +
Sbjct: 194 DEDGHAENFPQQHYAKETPRLAFKNNCELLVCDWCKHIRHTKEYLDFGDGERRLQFCSAK 253
Query: 747 CLLRF----YSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNL 802
CL ++ + ++ Q NL P L ++ P P + K E + ++ N
Sbjct: 254 CLNQYKMDIFYKETQANL-----PAGLCSTLHP------PMENKAEGTGVQLLTPDSWN- 301
Query: 803 GKIPVKTRSAPTAPTP---------PPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSK 853
IP+ T + AP+P P P T + A C + V
Sbjct: 302 --IPL-TDARRKAPSPVATAGQSQGPGPSASTTVSPSDTANCSVTK----IPTPVPKSIP 354
Query: 854 GSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFL 902
S+T P + + + P + P+ + + P+ + PVP+P+F+
Sbjct: 355 ISET----PNIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGPVPLPIFM 399
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.4 bits (119), Expect = 1e-05
Identities = 66/239 (27%), Positives = 82/239 (34%), Gaps = 27/239 (11%)
Query: 8 SPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLE 67
+P P P G ++ G + T P+ P PSP + TP
Sbjct: 1056 APTTPAATLPSPKGGPATPSLK-GAPTPPAATPPSPKGGPATPSPKGAPMPPAATP---- 1110
Query: 68 KDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPD 127
P G G A +PP P+G LA T P TP PP
Sbjct: 1111 --PSPKGGLATPPHKGAPTTPAATPPS----PKGGLA------TPPPKGAPTTPAATPPS 1158
Query: 128 PGAGANSCSPEGL-LEPLA-PDSPIT-LQSPHIEEEETTSIATARRGSPGQEEELPQGQP 184
P G + P+G P A P SP L +P + TT AT G P+G P
Sbjct: 1159 PKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1218
Query: 185 QSPNA-PPSPSVG----ETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERK 238
+P A PPSP G G + T P PA P P G + PP K
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP--PPKGAPTPPAATPPSLK 1275
Score = 49.3 bits (116), Expect = 3e-05
Identities = 69/270 (25%), Positives = 92/270 (34%), Gaps = 40/270 (14%)
Query: 3 PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDT 62
PS PF P P P P +++ P P PSP T
Sbjct: 888 PSVVNLPF-PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT 946
Query: 63 PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH-GPEGTLAWDAGDQTLEPGPGGQTP 121
P + P AP+PP P+G G T P P
Sbjct: 947 PPSPKGGPATPSPKW-----------APTPPAATPPSPKG------GPATPSPKGAPTPP 989
Query: 122 EVVPPDPGAGANSCSPEGLLEP--LAPDSP--ITLQSPHIEEEETTSIAT--ARRGSPGQ 175
PP P G + SP+G P + P SP +P + T AT + +GSP
Sbjct: 990 AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA- 1048
Query: 176 EEELPQGQPQSPNAP-PSPSVGETLGDGINSSQTKPGGSSP-----PAHPSLPGDGLTAK 229
LP+G P +P A PSP G + + T P + P PA PS G +
Sbjct: 1049 ATPLPKGAPTTPAATLPSPKGGPAT-PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Query: 230 ASEKPPE-------RKRSERVRRAEPPKPE 252
A+ P+ K + A PP P+
Sbjct: 1108 ATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Score = 47.4 bits (111), Expect = 1e-04
Identities = 96/396 (24%), Positives = 126/396 (31%), Gaps = 82/396 (20%)
Query: 3 PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDT 62
PS +P P P P G L G + T P+ P P P T
Sbjct: 1212 PSPKGAPTTPAATPPSPKGG-LATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT 1270
Query: 63 PAGLEKDPGVLDGATELLGLGGLLYK-APSPPEVDH-GPEGTLAWDAGDQTLEPGPGGQT 120
P L+ GL +K AP+P V P+G G T P
Sbjct: 1271 PPSLKG------------GLATPPHKGAPNPAVVTPPSPKG------GPATSPPKGAPTP 1312
Query: 121 PEVVPPDPGAGANSCSPEGLLEPLA---------PDSPITLQS-------PHIEEEETTS 164
P PP P + P+G P A P P T S P +E T
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372
Query: 165 IAT-ARRGSP---------GQEEELPQGQPQSPNAPP-----------------SPSVGE 197
AT + +G P G P+G P SP P +PS G+
Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 198 TLGDGIN--SSQTKPGGSSP---PAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
+ S + P S+P PA PS GD + PP K EPP P+
Sbjct: 1433 LTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT--PPSPK--------EPPAPK 1482
Query: 253 VVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPR--MSLRSSVSQRAGRSAVGTKMT 310
V +T S P + A + P +P P+ P S R ++ A + T T
Sbjct: 1483 QV-ATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPAT 1541
Query: 311 CAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKK 346
A + T K P + T S K
Sbjct: 1542 LAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSK 1577
Score = 38.9 bits (89), Expect = 0.034
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 762 TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENG---NLGKIPVKTRSAPTAPTP 818
T P+ L + SP+ P TP+ T + TP G P + P P P
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP 1260
Query: 819 P--PPPPPATPRKNKAAMCKP 837
P PP ATP K + P
Sbjct: 1261 KGAPTPPAATPPSLKGGLATP 1281
Score = 38.1 bits (87), Expect = 0.058
Identities = 41/167 (24%), Positives = 50/167 (29%), Gaps = 36/167 (21%)
Query: 762 TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPP-- 819
T S P+ + +P+ P +PS P G K P A TPP
Sbjct: 914 TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973
Query: 820 ------------PPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVL 867
P PP ATP K P KG+ T P +
Sbjct: 974 KGGPATPSPKGAPTPPAATPPSPKGGPATP-------------SPKGAPT----PPAVTP 1016
Query: 868 PIP--VPIFVPVPMHLYCQKV---PVPFSMPIPVPVPMFLPTTLEST 909
P P P P P P P P P+P PTT +T
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAAT 1063
Score = 37.7 bits (86), Expect = 0.076
Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 14/125 (11%)
Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAM 834
PESK TP V E+ ++ P S P AP+P P PP
Sbjct: 1765 PESKASTPLTAAAFEK--VLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQ-------- 1814
Query: 835 CKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPI 894
+ L + G+ + K E+ +++ L P PI VP +P P S I
Sbjct: 1815 -QFLPSSPGLVLESPSKPLAPADED---ELLPLIPPEPISGGVPFQSVLVNMPTPKSAGI 1870
Query: 895 PVPVP 899
PVP P
Sbjct: 1871 PVPTP 1875
Score = 34.7 bits (78), Expect = 0.65
Identities = 45/182 (24%), Positives = 57/182 (31%), Gaps = 28/182 (15%)
Query: 114 PGPGGQT--PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRG 171
P P G P PP P G + SP+ P A P SP +G
Sbjct: 934 PSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP----SP--------------KG 975
Query: 172 SPGQEEELPQGQPQSPNA-PPSPSVGETL----GDGINSSQTKPGGSSPPAHPSLPGDGL 226
P P+G P P A PPSP G G + T P PA P G
Sbjct: 976 GPATPS--PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFP-KGA 1032
Query: 227 TAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRR 286
+ + PP K S P +T P + ++ P P P+
Sbjct: 1033 STPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG 1092
Query: 287 SP 288
P
Sbjct: 1093 GP 1094
Score = 34.7 bits (78), Expect = 0.65
Identities = 79/335 (23%), Positives = 111/335 (33%), Gaps = 63/335 (18%)
Query: 3 PSDFPSPFDPLTLPEKPLAGDLPVDMEFGED-------LLESQT----APTRGWAPPGPS 51
P+ +P P +P P ++P D LL +T AP PP +
Sbjct: 1497 PAPMGAPTLPAVIPSSPK--EVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMT 1554
Query: 52 -PSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQ 110
PS + TP P + ++ APSP E+ P T
Sbjct: 1555 VPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVT-------- 1606
Query: 111 TLEPGPGGQTPEVVPPDPGAGANSCSPEG--LLEPLAP----DSPITLQSPHIEEEETTS 164
+ P P V PP P G + +P+G P+ P DSP + S + T
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666
Query: 165 IAT----ARRGSPGQEEELPQGQPQSP--------NAPPSPSVGETLGDGINSSQTKPGG 212
A+ A++G +E L P+S P + T K G
Sbjct: 1667 QASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGS 1726
Query: 213 SSP-------PAHPSLPGDGLTAKASE---------KPPERKRSERVRRAE----PPKPE 252
P P P TAK + PPE K S + A PKPE
Sbjct: 1727 KGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPE 1786
Query: 253 --VVDSTESIPVSDEDSDAMVDD-PNDEDFVPFRP 284
V + S PVS + + V P + F+P P
Sbjct: 1787 SASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSP 1821
Score = 34.3 bits (77), Expect = 0.84
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 15/81 (18%)
Query: 762 TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENG------------NLGKIPVKT 809
T P+ L + SP+ P TP+ T + TP G G
Sbjct: 1178 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1237
Query: 810 RSAPTAPTPPPPPP---PATP 827
+ APT P PP P PATP
Sbjct: 1238 KGAPTTPAATPPSPKGGPATP 1258
Score = 32.7 bits (73), Expect = 2.5
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 14/78 (17%)
Query: 774 SPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPP--------PPP--- 822
SP+ P TPS P G L P K A TPP PPP
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGA 1148
Query: 823 ---PPATPRKNKAAMCKP 837
P ATP K + P
Sbjct: 1149 PTTPAATPPSPKGGLATP 1166
Score = 32.3 bits (72), Expect = 3.2
Identities = 61/244 (25%), Positives = 81/244 (33%), Gaps = 32/244 (13%)
Query: 4 SDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPP---GPSPSSGALDLL 60
S FPSP T+ PL ++P L TAP P GP S AL L
Sbjct: 65 SPFPSPS---TIASTPL--EVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALA 119
Query: 61 D-----TPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPG 115
T G L A L + + PP + P ++G
Sbjct: 120 SPMIAPTLKGTPSSSAPL--ALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSA 177
Query: 116 PGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQ 175
P + P +P N E + P SP + S + T +A+ + G
Sbjct: 178 P------IAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVST-VPYHCVTPMASIQSGVAS- 229
Query: 176 EEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGG------SSPPAHPSLPGDGLTAK 229
LPQ P + A SP V +T + S PG SPPA SL L
Sbjct: 230 ---LPQTTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVV 286
Query: 230 ASEK 233
S +
Sbjct: 287 TSSQ 290
Score = 32.0 bits (71), Expect = 4.2
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 758 PNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAP- 816
P T P+ + SP+ P P+ T + TP G P + P +P
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG----APTTPAATPPSPK 1137
Query: 817 ----TPPPPPPPATP 827
TPPP P TP
Sbjct: 1138 GGLATPPPKGAPTTP 1152
Score = 31.2 bits (69), Expect = 7.1
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 762 TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAP------TA 815
T P+ L + P+ P TP+ T + TP G P T +P +
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGLATPS 1213
Query: 816 PTPPPPPPPATPRKNKAAMCKP 837
P P P ATP K + P
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATP 1235
Score = 31.2 bits (69), Expect = 7.1
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 768 SLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATP 827
+++ SP+ P T P G+ G P K APT P PP P TP
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK--GAPTPPAVTPPSPKGTP 1347
Score = 30.8 bits (68), Expect = 9.3
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 762 TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPP 821
T P+ L + P+ P TP+ T P G L P K APT P PP
Sbjct: 1132 TPPSPKGGLATPPPKGAPTTPAAT---------PPSPKGGLATPPPK--GAPTTPAATPP 1180
Query: 822 PPP---ATP 827
P ATP
Sbjct: 1181 SPKGGLATP 1189
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 49.3 bits (116), Expect = 3e-05
Identities = 57/219 (26%), Positives = 72/219 (32%), Gaps = 22/219 (10%)
Query: 36 ESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV 95
+SQ P R P GP P G + G PG +G G ++ PP
Sbjct: 109 QSQGPPPRPGKPEGPPPQGG-----NQSQGPPPRPGKPEGPPPQGG-----NQSQGPPPR 158
Query: 96 DHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPE-GLLEPLAPDSPITLQS 154
PEG G+Q+ P P PE PP G + P G E P Q
Sbjct: 159 PGKPEGPPP-QGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 217
Query: 155 PHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSS 214
P + G P Q PQG P P P P E +P G
Sbjct: 218 PPPRPGKP-------EGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPP 270
Query: 215 PPA---HPSLPGDGLTAKASEKPPERKRSERVRRAEPPK 250
PP LP + PP+ R R + +PP+
Sbjct: 271 PPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309
Score = 46.2 bits (108), Expect = 2e-04
Identities = 59/228 (25%), Positives = 78/228 (34%), Gaps = 38/228 (16%)
Query: 36 ESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV 95
+SQ P R P GP P G + G PG +G G ++ PP
Sbjct: 67 QSQGPPPRPGKPEGPPPQGG-----NQSQGPPPRPGKPEGQPPQGG-----NQSQGPPPR 116
Query: 96 DHGPEGTLAWDAGDQTLEPGP-----------GGQTPEVVPPDPGAGANSCSPEGLLEPL 144
PEG G+Q+ P P GG + PP PG G
Sbjct: 117 PGKPEGPPP-QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 175
Query: 145 APDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGIN 204
P P + P + + R G P E PQG QS PP P E +
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKP--EGPPPQGGNQSQGPPPRPGKPE---GPPS 230
Query: 205 SSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
KP G PP HP P + PP ++ ++ R P +P+
Sbjct: 231 QGGNKPQG--PPPHPGKP---------QGPPPQEGNKPQRPPPPGRPQ 267
Score = 39.3 bits (90), Expect = 0.026
Identities = 41/149 (27%), Positives = 49/149 (32%), Gaps = 20/149 (13%)
Query: 117 GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQE 176
GG P+ PP PG G P P + P + + R G P E
Sbjct: 43 GGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP--E 100
Query: 177 EELPQGQPQSPNAPPSPSVGE-TLGDGINSSQTKP------------GGSSPPAHPSLPG 223
+ PQG QS PP P E G N SQ P GG+ P PG
Sbjct: 101 GQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 160
Query: 224 DGLTAKASEKPPERKRSERVRRAEPPKPE 252
K PP+ + P KPE
Sbjct: 161 -----KPEGPPPQGGNQSQGPPPHPGKPE 184
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 48.9 bits (115), Expect = 3e-05
Identities = 49/183 (26%), Positives = 64/183 (34%), Gaps = 19/183 (10%)
Query: 49 GPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV-DHGPEGTLAWDA 107
GP +SG P G + PG L G G G+ +V + GPEG D
Sbjct: 729 GPKGASGPAG----PPGAQGPPG-LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG 783
Query: 108 GDQTLEP-------GPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE 160
G P G G+ EV PP P A + G P P P +
Sbjct: 784 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 843
Query: 161 ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS 220
+ A +G GQ+ + PQ P+ P P G T G+ + G PP
Sbjct: 844 QPG--AKGEQGEAGQKGDAGAPGPQGPSGAPGPQ-GPT---GVTGPKGARGAQGPPGATG 897
Query: 221 LPG 223
PG
Sbjct: 898 FPG 900
Score = 42.4 bits (98), Expect = 0.003
Identities = 55/205 (26%), Positives = 67/205 (32%), Gaps = 31/205 (15%)
Query: 44 GWAPPGPSPSSGALDLLDTPAGLEKDPGV-----LDGATELLGLGGLLYKAPSPPEVDHG 98
G A P +P L P G DPG L GA L G G D G
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG-----------DAG 570
Query: 99 PEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE 158
P+G + G G+ PP P G P + P
Sbjct: 571 PQGKVG--------PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG-----EPGKA 617
Query: 159 EEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAH 218
E+ A RG PG++ E P P A P+ GE G + Q PG PP
Sbjct: 618 GEKGLPGAPGLRGLPGKDGETGAAGPPGP-AGPAGERGEQGAPGPSGFQGLPGPPGPPGE 676
Query: 219 PSLPGD-GLTAKASEKPPERKRSER 242
PGD G+ +A R ER
Sbjct: 677 GGKPGDQGVPGEAGAPGLVGPRGER 701
Score = 41.6 bits (96), Expect = 0.005
Identities = 53/188 (28%), Positives = 70/188 (37%), Gaps = 32/188 (17%)
Query: 47 PPGPSPSSGALDLLDTPA--GLEKDPGV-----LDGATELLGLGGLLYK--APSPPEVDH 97
PPGP + G ++ P G +PG L GA L GL G + A PP
Sbjct: 589 PPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPP---- 644
Query: 98 GPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHI 157
GP G A + G+Q PGP G PP P +G+ P +P +
Sbjct: 645 GPAGP-AGERGEQGA-PGPSGFQGLPGPPGPPGEGGKPGDQGV--------PGEAGAPGL 694
Query: 158 EEEETTSIATARRGSPG-QEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPP 216
RGSPG Q + P+G P +P G G + PG PP
Sbjct: 695 VGPRGERGFPGERGSPGAQGLQGPRGLPGTP--------GTDGPKGASGPAGPPGAQGPP 746
Query: 217 AHPSLPGD 224
+PG+
Sbjct: 747 GLQGMPGE 754
Score = 38.1 bits (87), Expect = 0.058
Identities = 50/202 (24%), Positives = 62/202 (30%), Gaps = 59/202 (29%)
Query: 63 PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTL--------EP 114
P G + +PG + G G P P + GP G D G++ EP
Sbjct: 102 PKGQKGEPGDIKDIVGPKGPPG-----PQGPAGEQGPRGDRG-DKGEKGAPGPRGRDGEP 155
Query: 115 G----PGGQTPEVVPPDPGAGANSCS--------------------PEGLLEPLAPDSPI 150
G PG P P PG G N + P G + P P P
Sbjct: 156 GTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPA 215
Query: 151 TLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKP 210
P +G+PG+ E P P PP P G+ DG K
Sbjct: 216 GAPGPQ-----------GFQGNPGEPGEPGVSGPMGPRGPPGPP-GKPGDDGEAGKPGKA 263
Query: 211 GGSSP---------PAHPSLPG 223
G P P P LPG
Sbjct: 264 GERGPPGPQGARGFPGTPGLPG 285
Score = 36.2 bits (82), Expect = 0.22
Identities = 63/267 (23%), Positives = 82/267 (30%), Gaps = 48/267 (17%)
Query: 7 PSPFDPLTLPEKP-LAGDLPVDMEFGED---------LLESQTAPTRGWAPPGPSPSSGA 56
P P P P P L G+ M G D +++ P PPGP+ + G
Sbjct: 161 PGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGP 220
Query: 57 LDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGP 116
P G +PGV P P GP G D E G
Sbjct: 221 QGFQGNP-GEPGEPGV---------------SGPMGPRGPPGPPGKPGDDG-----EAGK 259
Query: 117 GGQTPEVVPPDPGAGANSCSPEGLLE-------PLAPDSPITLQSPHIEEEETTSIATAR 169
G+ E PP P GL P + +P ++ E S +
Sbjct: 260 PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGE 316
Query: 170 RGSPGQEEELPQGQP-QSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG----D 224
GSPG P+G P + P+ + G DG PG P P PG
Sbjct: 317 NGSPGPMG--PRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAK 374
Query: 225 GLTAKASEKPPERKRSERVRRAEPPKP 251
G + PE + R P P
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSP 401
Score = 36.2 bits (82), Expect = 0.22
Identities = 55/222 (24%), Positives = 66/222 (29%), Gaps = 55/222 (24%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
PPGP G P G E PG DG G G+ + D G G +
Sbjct: 1018 PPGPVGPPGLTGPAGEP-GREGSPGA-DGPPGRDGAAGV--------KGDRGETGAVGAP 1067
Query: 107 AGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
PGP G P +G + P P +Q P +
Sbjct: 1068 GA-----PGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG 1122
Query: 167 -------------TARRGSPG-------QEEELPQGQPQSPNAPPSPSVGETLGDGIN-- 204
T +G PG Q P G P P PP P VG + DG N
Sbjct: 1123 EPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAG-PSGPRGPPGP-VGPSGKDGANGI 1180
Query: 205 ------------SSQT----KPGGSSPPAHPSLPGDGLTAKA 230
S +T PG PP P PG G+ A
Sbjct: 1181 PGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSA 1222
Score = 33.5 bits (75), Expect = 1.4
Identities = 50/206 (24%), Positives = 59/206 (28%), Gaps = 32/206 (15%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
PPGP+ +G P G + PG E G P P GP+G
Sbjct: 829 PPGPAGFAG-------PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP---- 877
Query: 107 AGDQTLEPGPGGQTPEVVPPDPGAGANSCSP--EGLLEPLAPDSPITLQSPHIEEEETTS 164
G + G Q P PGA P G P P P P ++
Sbjct: 878 TGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP 937
Query: 165 IATARR-------GSPGQEEELPQGQPQSPNAPPSPS--------VGETLGDGINSSQTK 209
A G PG++ E P PP P VG G
Sbjct: 938 PGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL 997
Query: 210 PGGSSPPAHPSLPGDGLTAKASEKPP 235
PG S P PG A PP
Sbjct: 998 PGPSGEPGKQGAPG----ASGDRGPP 1019
Score = 31.6 bits (70), Expect = 5.5
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 35/113 (30%)
Query: 113 EPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGS 172
+PGP GQ E PG + P+G P P P Q P + + +G+
Sbjct: 99 QPGPKGQKGE-----PGDIKDIVGPKG---PPGPQGPAGEQGPRGDRGDK-----GEKGA 145
Query: 173 PGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDG 225
PG P+G+ P P +P G PP P PG G
Sbjct: 146 PG-----PRGRDGEPGTPGNP-----------------GPPGPPGPPGPPGLG 176
Score = 31.6 bits (70), Expect = 5.5
Identities = 47/181 (25%), Positives = 59/181 (32%), Gaps = 32/181 (17%)
Query: 47 PPGPSPSSGALDL--------------LDTPAGLEKDPGVLDGATELLGLGGLLYKAPSP 92
PPGP+ S+GA P G + PG E G P
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867
Query: 93 PEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITL 152
P GP+G G + G Q P PGA A P G P P
Sbjct: 868 PSGAPGPQG----PTGVTGPKGARGAQGPPGATGFPGA-AGRVGPPGSNGNPGPPGP--- 919
Query: 153 QSPHIEEEETTSIATARRGSPGQEEELPQGQP--QSPNAPPSPSVGETLGDGINSSQTKP 210
P ++ A G PG+ G+P Q P PP GE DG + ++ P
Sbjct: 920 --PGPSGKDGPKGARGDSGPPGR-----AGEPGLQGPAGPPGEK-GEPGDDGPSGAEGPP 971
Query: 211 G 211
G
Sbjct: 972 G 972
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 48.9 bits (115), Expect = 3e-05
Identities = 49/183 (26%), Positives = 64/183 (34%), Gaps = 19/183 (10%)
Query: 49 GPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV-DHGPEGTLAWDA 107
GP +SG P G + PG L G G G+ +V + GPEG D
Sbjct: 660 GPKGASGPAG----PPGAQGPPG-LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG 714
Query: 108 GDQTLEP-------GPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE 160
G P G G+ EV PP P A + G P P P +
Sbjct: 715 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774
Query: 161 ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS 220
+ A +G GQ+ + PQ P+ P P G T G+ + G PP
Sbjct: 775 QPG--AKGEQGEAGQKGDAGAPGPQGPSGAPGPQ-GPT---GVTGPKGARGAQGPPGATG 828
Query: 221 LPG 223
PG
Sbjct: 829 FPG 831
Score = 42.4 bits (98), Expect = 0.003
Identities = 55/205 (26%), Positives = 67/205 (32%), Gaps = 31/205 (15%)
Query: 44 GWAPPGPSPSSGALDLLDTPAGLEKDPGV-----LDGATELLGLGGLLYKAPSPPEVDHG 98
G A P +P L P G DPG L GA L G G D G
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG-----------DAG 501
Query: 99 PEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE 158
P+G + G G+ PP P G P + P
Sbjct: 502 PQGKVG--------PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG-----EPGKA 548
Query: 159 EEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAH 218
E+ A RG PG++ E P P A P+ GE G + Q PG PP
Sbjct: 549 GEKGLPGAPGLRGLPGKDGETGAAGPPGP-AGPAGERGEQGAPGPSGFQGLPGPPGPPGE 607
Query: 219 PSLPGD-GLTAKASEKPPERKRSER 242
PGD G+ +A R ER
Sbjct: 608 GGKPGDQGVPGEAGAPGLVGPRGER 632
Score = 41.6 bits (96), Expect = 0.005
Identities = 53/188 (28%), Positives = 70/188 (37%), Gaps = 32/188 (17%)
Query: 47 PPGPSPSSGALDLLDTPA--GLEKDPGV-----LDGATELLGLGGLLYK--APSPPEVDH 97
PPGP + G ++ P G +PG L GA L GL G + A PP
Sbjct: 520 PPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPP---- 575
Query: 98 GPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHI 157
GP G A + G+Q PGP G PP P +G+ P +P +
Sbjct: 576 GPAGP-AGERGEQGA-PGPSGFQGLPGPPGPPGEGGKPGDQGV--------PGEAGAPGL 625
Query: 158 EEEETTSIATARRGSPG-QEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPP 216
RGSPG Q + P+G P +P G G + PG PP
Sbjct: 626 VGPRGERGFPGERGSPGAQGLQGPRGLPGTP--------GTDGPKGASGPAGPPGAQGPP 677
Query: 217 AHPSLPGD 224
+PG+
Sbjct: 678 GLQGMPGE 685
Score = 38.1 bits (87), Expect = 0.058
Identities = 50/202 (24%), Positives = 62/202 (30%), Gaps = 59/202 (29%)
Query: 63 PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTL--------EP 114
P G + +PG + G G P P + GP G D G++ EP
Sbjct: 33 PKGQKGEPGDIKDIVGPKGPPG-----PQGPAGEQGPRGDRG-DKGEKGAPGPRGRDGEP 86
Query: 115 G----PGGQTPEVVPPDPGAGANSCS--------------------PEGLLEPLAPDSPI 150
G PG P P PG G N + P G + P P P
Sbjct: 87 GTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPA 146
Query: 151 TLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKP 210
P +G+PG+ E P P PP P G+ DG K
Sbjct: 147 GAPGPQ-----------GFQGNPGEPGEPGVSGPMGPRGPPGPP-GKPGDDGEAGKPGKA 194
Query: 211 GGSSP---------PAHPSLPG 223
G P P P LPG
Sbjct: 195 GERGPPGPQGARGFPGTPGLPG 216
Score = 36.2 bits (82), Expect = 0.22
Identities = 63/267 (23%), Positives = 82/267 (30%), Gaps = 48/267 (17%)
Query: 7 PSPFDPLTLPEKP-LAGDLPVDMEFGED---------LLESQTAPTRGWAPPGPSPSSGA 56
P P P P P L G+ M G D +++ P PPGP+ + G
Sbjct: 92 PGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGP 151
Query: 57 LDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGP 116
P G +PGV P P GP G D E G
Sbjct: 152 QGFQGNP-GEPGEPGV---------------SGPMGPRGPPGPPGKPGDDG-----EAGK 190
Query: 117 GGQTPEVVPPDPGAGANSCSPEGLLE-------PLAPDSPITLQSPHIEEEETTSIATAR 169
G+ E PP P GL P + +P ++ E S +
Sbjct: 191 PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGE 247
Query: 170 RGSPGQEEELPQGQP-QSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG----D 224
GSPG P+G P + P+ + G DG PG P P PG
Sbjct: 248 NGSPGPMG--PRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAK 305
Query: 225 GLTAKASEKPPERKRSERVRRAEPPKP 251
G + PE + R P P
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSP 332
Score = 36.2 bits (82), Expect = 0.22
Identities = 55/222 (24%), Positives = 66/222 (29%), Gaps = 55/222 (24%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
PPGP G P G E PG DG G G+ + D G G +
Sbjct: 949 PPGPVGPPGLTGPAGEP-GREGSPGA-DGPPGRDGAAGV--------KGDRGETGAVGAP 998
Query: 107 AGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
PGP G P +G + P P +Q P +
Sbjct: 999 GA-----PGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG 1053
Query: 167 -------------TARRGSPG-------QEEELPQGQPQSPNAPPSPSVGETLGDGIN-- 204
T +G PG Q P G P P PP P VG + DG N
Sbjct: 1054 EPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAG-PSGPRGPPGP-VGPSGKDGANGI 1111
Query: 205 ------------SSQT----KPGGSSPPAHPSLPGDGLTAKA 230
S +T PG PP P PG G+ A
Sbjct: 1112 PGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSA 1153
Score = 33.5 bits (75), Expect = 1.4
Identities = 50/206 (24%), Positives = 59/206 (28%), Gaps = 32/206 (15%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
PPGP+ +G P G + PG E G P P GP+G
Sbjct: 760 PPGPAGFAG-------PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP---- 808
Query: 107 AGDQTLEPGPGGQTPEVVPPDPGAGANSCSP--EGLLEPLAPDSPITLQSPHIEEEETTS 164
G + G Q P PGA P G P P P P ++
Sbjct: 809 TGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP 868
Query: 165 IATARR-------GSPGQEEELPQGQPQSPNAPPSPS--------VGETLGDGINSSQTK 209
A G PG++ E P PP P VG G
Sbjct: 869 PGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL 928
Query: 210 PGGSSPPAHPSLPGDGLTAKASEKPP 235
PG S P PG A PP
Sbjct: 929 PGPSGEPGKQGAPG----ASGDRGPP 950
Score = 33.1 bits (74), Expect = 1.9
Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 35/118 (29%)
Query: 108 GDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIAT 167
G +PGP GQ E PG + P+G P P P Q P + +
Sbjct: 25 GQDVRQPGPKGQKGE-----PGDIKDIVGPKG---PPGPQGPAGEQGPRGDRGDK----- 71
Query: 168 ARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDG 225
+G+PG P+G+ P P +P G PP P PG G
Sbjct: 72 GEKGAPG-----PRGRDGEPGTPGNP-----------------GPPGPPGPPGPPGLG 107
Score = 31.6 bits (70), Expect = 5.5
Identities = 47/181 (25%), Positives = 59/181 (32%), Gaps = 32/181 (17%)
Query: 47 PPGPSPSSGALDL--------------LDTPAGLEKDPGVLDGATELLGLGGLLYKAPSP 92
PPGP+ S+GA P G + PG E G P
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798
Query: 93 PEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITL 152
P GP+G G + G Q P PGA A P G P P
Sbjct: 799 PSGAPGPQG----PTGVTGPKGARGAQGPPGATGFPGA-AGRVGPPGSNGNPGPPGP--- 850
Query: 153 QSPHIEEEETTSIATARRGSPGQEEELPQGQP--QSPNAPPSPSVGETLGDGINSSQTKP 210
P ++ A G PG+ G+P Q P PP GE DG + ++ P
Sbjct: 851 --PGPSGKDGPKGARGDSGPPGR-----AGEPGLQGPAGPPGEK-GEPGDDGPSGAEGPP 902
Query: 211 G 211
G
Sbjct: 903 G 903
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 48.1 bits (113), Expect = 6e-05
Identities = 46/166 (27%), Positives = 57/166 (34%), Gaps = 24/166 (14%)
Query: 32 EDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS 91
ED+ + ++ P GPSP G + P G PG G GG + P
Sbjct: 21 EDVSQEESPSLIAGNPQGPSPQGG-----NKPQGPPPPPGKPQGPPPQ---GGNKPQGPP 72
Query: 92 PPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPD------PGAGANSCSPEGLLEPLA 145
PP GP GD++ P P+ PP P A S S P
Sbjct: 73 PPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGK 127
Query: 146 PDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPP 191
P P P E G+P Q + P GQPQ P PP
Sbjct: 128 PQGP-----PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 168
Score = 38.1 bits (87), Expect = 0.058
Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 18/136 (13%)
Query: 114 PGP-GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGS 172
P P GG P+ PP PG P+G +P P P Q P + +++ S
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQGDKSRS-------- 89
Query: 173 PGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASE 232
P+ P P PP P G+ G SPP P P
Sbjct: 90 -------PRSPPGKPQGPP-PQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQG 141
Query: 233 KPPERKRSERVRRAEP 248
PP + + +A P
Sbjct: 142 PPPPAGGNPQQPQAPP 157
Score = 36.6 bits (83), Expect = 0.17
Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 10/117 (8%)
Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGI 203
LA S L +EE + IA +G Q PQG P P P P
Sbjct: 11 LALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP--------- 61
Query: 204 NSSQTKPGGSSPPAHP-SLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTES 259
KP G PP P P G +++ PP + + + +P P ++S
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKS 118
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 47.8 bits (112), Expect = 7e-05
Identities = 99/418 (23%), Positives = 142/418 (33%), Gaps = 70/418 (16%)
Query: 3 PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTA------PTRGWAPPGPSPSSGA 56
P D P +P + GD D E G+ T P PPGP+ G
Sbjct: 1344 PGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGR 1403
Query: 57 LDLLDTP--AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGT--LAWDAGDQTL 112
AGLE PG T +G G AP P GP+G + G+Q L
Sbjct: 1404 QGEKGAKGEAGLEGPPG----KTGPIGPQG----APGKP----GPDGLRGIPGPVGEQGL 1451
Query: 113 --EPGPGGQTPEVVPPD-PGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATAR 169
PGP G + PP PG +S P+G E P + P + E+
Sbjct: 1452 PGSPGPDGPPGPMGPPGLPGLKGDS-GPKG--EKGHPGLIGLIGPPGEQGEKGDRGLPGP 1508
Query: 170 RGSPGQEEELPQGQPQSPNAPPSPS--------VGETLGDGINSSQTKPGGSSPPAHPSL 221
+GS G + E P P PP P G G + + G PP P
Sbjct: 1509 QGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGP 1568
Query: 222 PGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVP 281
PG+ + P ++ R RR + D+ ++DD N E++V
Sbjct: 1569 PGEVIQ-------PLPIQASRTRR------------------NIDASQLLDDGNGENYVD 1603
Query: 282 FRPRRSPRM----SLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGL---PQLF 334
+ SL+ + Q + +GT+ A LQ + P
Sbjct: 1604 YADGMEEIFGSLNSLKLEIEQM--KRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQG 1661
Query: 335 CSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQ 392
CS + +G TC F K+ + + + G F EF LS +A+
Sbjct: 1662 CSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAE 1719
Score = 43.9 bits (102), Expect = 0.001
Identities = 64/256 (25%), Positives = 85/256 (33%), Gaps = 53/256 (20%)
Query: 5 DFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPA 64
++P DP L ++P PV+ + + PT A P P S GA
Sbjct: 276 EYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTEAAPMPETSEGA-------- 327
Query: 65 GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAG----DQTLEPGPGGQT 120
G E +G+G Y PS P L + G DQ +PG G +
Sbjct: 328 ----------GKEEDVGIGDYDY-VPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 376
Query: 121 PEVV---------PPDPGAGANSCSPEGLLEPLA------------PDSPITLQSPHIEE 159
P P PG GA+ E E + P S + P +
Sbjct: 377 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA 436
Query: 160 EETTSI--ATARRGSPGQEEELPQGQP----QSPNAPPSPS--VGETLGDGINSSQTKPG 211
+ T RG GQ+ E +P + P P P+ G G PG
Sbjct: 437 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 496
Query: 212 GSSPPAHPSLPG-DGL 226
PP P LPG DGL
Sbjct: 497 ERGPPGRPGLPGADGL 512
Score = 37.7 bits (86), Expect = 0.076
Identities = 56/207 (27%), Positives = 66/207 (31%), Gaps = 43/207 (20%)
Query: 47 PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH----GPEGT 102
PPGP+ G AG + G + G T G G A P E H GP G
Sbjct: 599 PPGPAGKPGRRGR----AGSDGARG-MPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGP 653
Query: 103 LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEET 162
GD G P +P +PG P GLL P P P
Sbjct: 654 PG-PPGDDGERGDDGEVGPRGLPGEPG-------PRGLLGPKGPPGPPGPPG-------- 697
Query: 163 TSIATARRGSPGQEEEL-PQGQPQSPNAPPSPSV-------------GETLGDGINSSQT 208
T G PG + + PQG+P P +P GE G
Sbjct: 698 ---VTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPG 754
Query: 209 KPGGSSPPAHPSLPGDGLTAKASEKPP 235
PG PP HP G K + PP
Sbjct: 755 MPGADGPPGHPGKEGPP-GEKGGQGPP 780
Score = 37.0 bits (84), Expect = 0.13
Identities = 64/250 (25%), Positives = 80/250 (32%), Gaps = 59/250 (23%)
Query: 3 PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDT 62
P FP P P+ L P E GE Q P P GPS + GA D
Sbjct: 1217 PRGFPGPPGPVGLQGLPGPPG-----EKGETGDVGQMGPPGPPGPRGPSGAPGA----DG 1267
Query: 63 PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPE 122
P G PG + G G + + P E E L + G PGP G+ E
Sbjct: 1268 PQG---PPGGI-------GNPGAVGEKGEPGEAG---EPGLPGEGGP----PGPKGERGE 1310
Query: 123 VVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQG 182
P A P+G P D P +GSPG P G
Sbjct: 1311 KGESGPSGAAGPPGPKG---PPGDDGP--------------------KGSPG-----PVG 1342
Query: 183 QPQSPNAPPSPS-VGETLGDGINSSQTKPGGSSPPAHPSLPG----DGLTAKASEKPPER 237
P P P P G+ G +PG + P PG G PE
Sbjct: 1343 FPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEG 1402
Query: 238 KRSERVRRAE 247
++ E+ + E
Sbjct: 1403 RQGEKGAKGE 1412
Score = 35.8 bits (81), Expect = 0.29
Identities = 52/191 (27%), Positives = 57/191 (29%), Gaps = 30/191 (15%)
Query: 48 PGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGL----------GGLLYKAPSPPEVDH 97
PGP G L P GL PG G +G GG P
Sbjct: 855 PGPLGPPGEKGKLGVP-GLPGYPG-RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR 912
Query: 98 GPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHI 157
GP G E GP G T + P G P G P P P P
Sbjct: 913 GPTGPRG--------ERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGP-- 962
Query: 158 EEEETTSIATARRGSPGQEEELP-QGQPQSPNAP----PSPSVGETLGDGINSSQTKPGG 212
+ G PGQ E QG+ P P P GET G + PG
Sbjct: 963 KGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGET---GPMGERGHPGP 1019
Query: 213 SSPPAHPSLPG 223
PP LPG
Sbjct: 1020 PGPPGEQGLPG 1030
Score = 35.4 bits (80), Expect = 0.38
Identities = 57/248 (22%), Positives = 76/248 (30%), Gaps = 45/248 (18%)
Query: 47 PPGPSPSSGALDLLDT--PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLA 104
PPGP+ S G P G+ PG G K P P G +G +
Sbjct: 1082 PPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVG 1141
Query: 105 WDAGDQTL-EPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
+ PG G E+ P +G P P PI P + E
Sbjct: 1142 LPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPG 1201
Query: 164 SIATARRGSPGQE-EELPQGQP--------------------------QSPNAPPSPSVG 196
++G GQ+ +E P+G P P PP P G
Sbjct: 1202 --PRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPR-G 1258
Query: 197 ETLGDGINSSQTKPGGSSPP------------AHPSLPGDGLTAKASEKPPERKRSERVR 244
+ G + Q PGG P P LPG+G + E+ S
Sbjct: 1259 PSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSG 1318
Query: 245 RAEPPKPE 252
A PP P+
Sbjct: 1319 AAGPPGPK 1326
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 47.8 bits (112), Expect = 7e-05
Identities = 107/505 (21%), Positives = 161/505 (31%), Gaps = 84/505 (16%)
Query: 7 PSPFDPLTLPEKPLAGD----------------LPVDMEFGEDLLESQTAPTRGWAPPGP 50
P P + LP PLAGD P++ F LE + P+ PP P
Sbjct: 65 PPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPS---PPPPP 121
Query: 51 SPSSGALDLLDTPAGLEKDPGVLDGATELLG--LGGLLYKAPSPPEVDHG--PEGTLAWD 106
G + P + +D + L L + P V G P
Sbjct: 122 EEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPF 181
Query: 107 AGDQTLEPGPGGQTP----------EVVPPDPGAGANSCS----------PEGLLEPLAP 146
+ + +P GG P + +P P + P+ L +
Sbjct: 182 SSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQ 241
Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSS 206
P++L + +S A A + SP + P SP AP G +
Sbjct: 242 TQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGS--GSQPNQKLGHP 299
Query: 207 QTKPGGSSPPAHPSL------PGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESI 260
+ G+ P PS + K PP + +VR P P + E +
Sbjct: 300 EALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPPPAQNQNQVRSPGAPGPLTLKEVEEL 359
Query: 261 PVSDEDSDAMVDDPNDEDF-VPFRPRRSPRMSLRSSVSQRA-GRSAVGTKMTCAHCRTPL 318
+ ++ P ++ V R + R+ + RA G+ TC C L
Sbjct: 360 EQLTQQLMQDMEHPQRQNVAVNELCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQL 419
Query: 319 QKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFH 378
Q GQ Y +G P +C T K C C + I D ++ TG H
Sbjct: 420 Q-GQQFYSLEGAP--YCEGCYTDTLEK-------CNTCGEPI---TDRMLRATGKAYHPH 466
Query: 379 EFCTSVCLSLYEA------QQQRP--IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHR 430
F VC E Q RP +P A RCS+C + ++ E V
Sbjct: 467 CFTCVVCARPLEGTSFIVDQANRPHCVPDY-HKQYAPRCSVCSE--PIMPEPGRDETVRV 523
Query: 431 LCSDSCFSKFRANKGLKTNCCDQCG 455
+ D F +K C+ CG
Sbjct: 524 VALDKNFH-------MKCYKCEDCG 541
Score = 47.0 bits (110), Expect = 1e-04
Identities = 56/237 (23%), Positives = 87/237 (36%), Gaps = 31/237 (13%)
Query: 126 PDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE-----EEETTSIATARRGSPGQEEELP 180
P P + +P P P+ P + + E A+R G+ E+P
Sbjct: 6 PSPAISVSVSAP-AFYAPQKKFGPVVAPKPKVNPFRPGDSEPPPAPGAQRAQMGRVGEIP 64
Query: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHP----SLPGDGLTAKASEKPPE 236
P+ PP P G+ GD ++ GG+ PP P S P L + PP
Sbjct: 65 PPPPEDFPLPPPPLAGD--GD---DAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSPPP 119
Query: 237 RKRSERVRRAE-PPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRS-----PRM 290
E A PP P+ + SI + + +++DD D PF+ R S P +
Sbjct: 120 PPEEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKND--PFKARVSSGYVPPPV 177
Query: 291 SLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
+ S +A GT PL ++ + LPQ+ + T F +P
Sbjct: 178 ATPFSSKSSTKPAAGGT--------APLPPWKSPSSSQPLPQVPAPAQSQTQFHVQP 226
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 47.8 bits (112), Expect = 7e-05
Identities = 107/505 (21%), Positives = 161/505 (31%), Gaps = 84/505 (16%)
Query: 7 PSPFDPLTLPEKPLAGD----------------LPVDMEFGEDLLESQTAPTRGWAPPGP 50
P P + LP PLAGD P++ F LE + P+ PP P
Sbjct: 65 PPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPS---PPPPP 121
Query: 51 SPSSGALDLLDTPAGLEKDPGVLDGATELLG--LGGLLYKAPSPPEVDHG--PEGTLAWD 106
G + P + +D + L L + P V G P
Sbjct: 122 EEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPF 181
Query: 107 AGDQTLEPGPGGQTP----------EVVPPDPGAGANSCS----------PEGLLEPLAP 146
+ + +P GG P + +P P + P+ L +
Sbjct: 182 SSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQ 241
Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSS 206
P++L + +S A A + SP + P SP AP G +
Sbjct: 242 TQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGS--GSQPNQKLGHP 299
Query: 207 QTKPGGSSPPAHPSL------PGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESI 260
+ G+ P PS + K PP + +VR P P + E +
Sbjct: 300 EALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPPPAQNQNQVRSPGAPGPLTLKEVEEL 359
Query: 261 PVSDEDSDAMVDDPNDEDF-VPFRPRRSPRMSLRSSVSQRA-GRSAVGTKMTCAHCRTPL 318
+ ++ P ++ V R + R+ + RA G+ TC C L
Sbjct: 360 EQLTQQLMQDMEHPQRQNVAVNELCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQL 419
Query: 319 QKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFH 378
Q GQ Y +G P +C T K C C + I D ++ TG H
Sbjct: 420 Q-GQQFYSLEGAP--YCEGCYTDTLEK-------CNTCGEPI---TDRMLRATGKAYHPH 466
Query: 379 EFCTSVCLSLYEA------QQQRP--IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHR 430
F VC E Q RP +P A RCS+C + ++ E V
Sbjct: 467 CFTCVVCARPLEGTSFIVDQANRPHCVPDY-HKQYAPRCSVCSE--PIMPEPGRDETVRV 523
Query: 431 LCSDSCFSKFRANKGLKTNCCDQCG 455
+ D F +K C+ CG
Sbjct: 524 VALDKNFH-------MKCYKCEDCG 541
Score = 47.0 bits (110), Expect = 1e-04
Identities = 56/237 (23%), Positives = 87/237 (36%), Gaps = 31/237 (13%)
Query: 126 PDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE-----EEETTSIATARRGSPGQEEELP 180
P P + +P P P+ P + + E A+R G+ E+P
Sbjct: 6 PSPAISVSVSAP-AFYAPQKKFGPVVAPKPKVNPFRPGDSEPPPAPGAQRAQMGRVGEIP 64
Query: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHP----SLPGDGLTAKASEKPPE 236
P+ PP P G+ GD ++ GG+ PP P S P L + PP
Sbjct: 65 PPPPEDFPLPPPPLAGD--GD---DAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSPPP 119
Query: 237 RKRSERVRRAE-PPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRS-----PRM 290
E A PP P+ + SI + + +++DD D PF+ R S P +
Sbjct: 120 PPEEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKND--PFKARVSSGYVPPPV 177
Query: 291 SLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
+ S +A GT PL ++ + LPQ+ + T F +P
Sbjct: 178 ATPFSSKSSTKPAAGGT--------APLPPWKSPSSSQPLPQVPAPAQSQTQFHVQP 226
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 47.4 bits (111), Expect = 1e-04
Identities = 57/243 (23%), Positives = 81/243 (33%), Gaps = 19/243 (7%)
Query: 47 PPGPSPSSGALDLLDT--PAGLEKDPGVLDGA-------TELLGLG--GLLYKAPSPPEV 95
PPGP PS G++ AG G + A LGL GL+ PP +
Sbjct: 667 PPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPTTANHLGLSVPGLV---SVPPRL 723
Query: 96 DHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSP 155
GPE A D L P G P +PPD G P + S + +
Sbjct: 724 LPGPENHRAGSNEDPIL--APSGTPPPTIPPDETFGGRVPRPAFVHYDKEEASDVEIS-- 779
Query: 156 HIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSP 215
+E + S+ G P P G P AP P + P P
Sbjct: 780 -LESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGP 838
Query: 216 PAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPN 275
P P + + PP+ PP E + +I SDE+ + ++
Sbjct: 839 LPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEE 898
Query: 276 DED 278
+E+
Sbjct: 899 EEE 901
Score = 30.8 bits (68), Expect = 9.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 804 KIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKP 837
++P PT PTP P PPP P +A P
Sbjct: 634 RVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHP 667
Score = 30.8 bits (68), Expect = 9.3
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 19/125 (15%)
Query: 158 EEEETTSIATARRGSPGQEEELPQGQPQSPNAPPS---------------PSVGETLGDG 202
EEEE + G+ G E E +G P P PP+ P G L
Sbjct: 953 EEEELEEVEDLEFGTAGGEVE--EGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVE 1010
Query: 203 INSSQTKPGGSSPP--AHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESI 260
++ + G + P A +LP G + E P + + EP P + E+
Sbjct: 1011 EPGTEEERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETE 1070
Query: 261 PVSDE 265
SD+
Sbjct: 1071 DGSDK 1075
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,925,874
Number of Sequences: 37866
Number of extensions: 3993854
Number of successful extensions: 34874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 989
Number of HSP's that attempted gapping in prelim test: 24126
Number of HSP's gapped (non-prelim): 9137
length of query: 1370
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1255
effective length of database: 13,892,928
effective search space: 17435624640
effective search space used: 17435624640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.