Guide to the Human Genome
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Search of human proteins with 42475941

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42475941 zinc finger protein 261 [Homo sapiens]
         (1370 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42475941 zinc finger protein 261 [Homo sapiens]                   2866   0.0  
gi|4827067 zinc finger protein 261 [Homo sapiens]                    2866   0.0  
gi|37574606 zinc finger protein 198 [Homo sapiens]                    944   0.0  
gi|4508011 zinc finger protein 198 [Homo sapiens]                     944   0.0  
gi|44890068 zinc finger protein 262 [Homo sapiens]                    833   0.0  
gi|115511046 zinc finger protein 258 [Homo sapiens]                   270   9e-72
gi|38570099 glutamine-rich 1 [Homo sapiens]                           253   7e-67
gi|38570097 glutamine-rich 1 [Homo sapiens]                           253   7e-67
gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]      171   4e-42
gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens]         161   3e-39
gi|89001100 zinc finger protein 237 isoform 1 [Homo sapiens]           91   1e-17
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    63   2e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     61   8e-09
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre...    54   8e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    52   4e-06
gi|55741647 hypothetical protein LOC158405 [Homo sapiens]              52   4e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    50   1e-05
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    50   1e-05
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho...    50   1e-05
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    50   1e-05
gi|117938310 sine oculis binding protein homolog [Homo sapiens]        50   1e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    50   1e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    49   3e-05
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    49   3e-05
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    49   3e-05
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre...    48   6e-05
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       48   7e-05
gi|58530845 zyxin [Homo sapiens]                                       48   7e-05
gi|4508047 zyxin [Homo sapiens]                                        48   7e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    47   1e-04

>gi|42475941 zinc finger protein 261 [Homo sapiens]
          Length = 1370

 Score = 2866 bits (7429), Expect = 0.0
 Identities = 1370/1370 (100%), Positives = 1370/1370 (100%)

Query: 1    MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60
            MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL
Sbjct: 1    MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60

Query: 61   DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120
            DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT
Sbjct: 61   DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120

Query: 121  PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180
            PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP
Sbjct: 121  PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180

Query: 181  QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240
            QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS
Sbjct: 181  QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240

Query: 241  ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300
            ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA
Sbjct: 241  ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300

Query: 301  GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360
            GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI
Sbjct: 301  GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360

Query: 361  WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420
            WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH
Sbjct: 361  WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420

Query: 421  EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480
            EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC
Sbjct: 421  EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480

Query: 481  NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540
            NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT
Sbjct: 481  NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540

Query: 541  GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600
            GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG
Sbjct: 541  GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600

Query: 601  KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660
            KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC
Sbjct: 601  KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660

Query: 661  VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720
            VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC
Sbjct: 661  VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720

Query: 721  HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780
            HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ
Sbjct: 721  HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780

Query: 781  TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840
            TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ
Sbjct: 781  TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840

Query: 841  NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900
            NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM
Sbjct: 841  NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900

Query: 901  FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960
            FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS
Sbjct: 901  FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960

Query: 961  AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020
            AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV
Sbjct: 961  AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020

Query: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080
            GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA
Sbjct: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080

Query: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140
            NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL
Sbjct: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140

Query: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200
            GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL
Sbjct: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200

Query: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260
            GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP
Sbjct: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260

Query: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320
            VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL
Sbjct: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320

Query: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
            QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD
Sbjct: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370


>gi|4827067 zinc finger protein 261 [Homo sapiens]
          Length = 1370

 Score = 2866 bits (7429), Expect = 0.0
 Identities = 1370/1370 (100%), Positives = 1370/1370 (100%)

Query: 1    MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60
            MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL
Sbjct: 1    MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLL 60

Query: 61   DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120
            DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT
Sbjct: 61   DTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQT 120

Query: 121  PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180
            PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP
Sbjct: 121  PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP 180

Query: 181  QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240
            QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS
Sbjct: 181  QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRS 240

Query: 241  ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300
            ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA
Sbjct: 241  ERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPRMSLRSSVSQRA 300

Query: 301  GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360
            GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI
Sbjct: 301  GRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEI 360

Query: 361  WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420
            WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH
Sbjct: 361  WNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH 420

Query: 421  EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480
            EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC
Sbjct: 421  EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFC 480

Query: 481  NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540
            NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT
Sbjct: 481  NTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLT 540

Query: 541  GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600
            GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG
Sbjct: 541  GPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSG 600

Query: 601  KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660
            KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC
Sbjct: 601  KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGC 660

Query: 661  VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720
            VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC
Sbjct: 661  VLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARC 720

Query: 721  HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780
            HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ
Sbjct: 721  HACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQ 780

Query: 781  TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840
            TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ
Sbjct: 781  TPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQ 840

Query: 841  NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900
            NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM
Sbjct: 841  NRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPM 900

Query: 901  FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960
            FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS
Sbjct: 901  FLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQS 960

Query: 961  AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020
            AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV
Sbjct: 961  AEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLV 1020

Query: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080
            GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA
Sbjct: 1021 GPEDVSTEQDLPRTMRKGQKRLVLSESCSRDSMSSQPSCTGLNYSYGVNAWKCWVQSKYA 1080

Query: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140
            NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL
Sbjct: 1081 NGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCL 1140

Query: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200
            GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL
Sbjct: 1141 GIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQL 1200

Query: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260
            GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP
Sbjct: 1201 GVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAP 1260

Query: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320
            VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL
Sbjct: 1261 VRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYL 1320

Query: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
            QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD
Sbjct: 1321 QPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370


>gi|37574606 zinc finger protein 198 [Homo sapiens]
          Length = 1377

 Score =  944 bits (2441), Expect = 0.0
 Identities = 495/1125 (44%), Positives = 686/1125 (60%), Gaps = 100/1125 (8%)

Query: 288  PRMSLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
            P+   + SV Q+  +     K+TCA+C+ PLQKGQTAYQRKG   LFCS++CL++FS KP
Sbjct: 311  PKQIFQPSVQQQPTKPV---KVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKP 367

Query: 348  SGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADAT 407
            + KK C  CKK+I   K ++VAQ  S  SF EFC++ CLSLYE +Q    P  G   + +
Sbjct: 368  APKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQN---PTKG-ALNKS 423

Query: 408  RCSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGP 467
            RC+IC K  E+ HEVS  ++ H+LCSD CF+++R   GL  NCC+QCG Y+ +K    G 
Sbjct: 424  RCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSK--GAGN 481

Query: 468  ELLFHEGQQKRFCNTTCLGAYKK------------------------KNTRVYPCVWCKT 503
             +L  +GQQKRFC  +C+  YK+                        K  ++  C  C+T
Sbjct: 482  NVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQDSFLMQPEKYGKLTTCTGCRT 541

Query: 504  LCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVD 563
             C+ F+M   +  NG    +CS  C  S+K K A        C FC+R+          D
Sbjct: 542  QCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPD 601

Query: 564  RTVYQFCSPSCWTKFQ----RTSPEG------GIHLSCHYCHSLFSGKPEVLDWQDQVFQ 613
              +Y FC+ SC  KFQ    ++SP G       I L C+YC + F  KPE+L+W+++V Q
Sbjct: 602  GKLYNFCNSSCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQ 661

Query: 614  FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLG 673
            FC + C +D+K+L  +V+ CE+C++EK LHE + FSGV++ FCSEGC LLYKQDF ++LG
Sbjct: 662  FCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLG 721

Query: 674  LCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQGKLLETI 733
            L C+TC YCSQ C++G T++LDG   DFCSEDC  K+  WY KAARC  CK QG L E +
Sbjct: 722  LRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDCCKSQGTLKERV 781

Query: 734  HWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTV 793
             WRG+++HFC+Q CLLRFY QQN+PN+ TQ GPE+L   Q  ++     S+TK+      
Sbjct: 782  QWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQT-----SRTKM------ 830

Query: 794  RTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSK 853
                                T   PPP P P    KNKA +CKPL   +   CK  M++K
Sbjct: 831  --------------------TGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTK 870

Query: 854  GSQTEE-WKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKI 912
              QT++ W+ + + +PIPVP+++PVPMH+Y Q +PVP ++P+PVPVP+FLP  L+S++KI
Sbjct: 871  SCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKI 930

Query: 913  VETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFG 972
               IEELK K+ S+ L+ ++L M +M++E    D+  ++  ++ S      ++ + D+ G
Sbjct: 931  PAAIEELKSKVSSDALDTELLTMTDMMSE----DEGKTETTNINS------VIIETDIIG 980

Query: 973  P--ARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLVGPEDVSTEQD 1030
                ++        M +V  EP  D+E DFP+   +++   +FL    + G E    EQ 
Sbjct: 981  SDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLP-PVFGEE--YEEQP 1037

Query: 1031 LPRTMRKGQKRLVLSESCSRDSMSSQPSCT-GLNYSYGVNAWKCWVQSKYANGETSKGDE 1089
             PR+ +KG KR  +S   S D  S    C+    Y+YGVNAWK WV+++  + +    DE
Sbjct: 1038 RPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDE 1097

Query: 1090 LRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLEN 1149
            L+   K +++KED+L+ + AELNYGLA FV EI RPNGE Y PDSIYYLCLGIQ+YL  +
Sbjct: 1098 LK-SSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGS 1156

Query: 1150 NRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYSPFVLL 1209
            NR  NIF D  Y TF QELNK L +WQP++LP+ ++FSRVEE++LW  KQLG +SP  LL
Sbjct: 1157 NRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALL 1216

Query: 1210 NTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVRQRKGRDT 1269
            NTL +FNTK+FGL+T E+H++LSF  V R  +K   P        +RY   V    G D 
Sbjct: 1217 NTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKK--NPLTMENKACLRY--QVSSLCGTDN 1272

Query: 1270 ----GPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERS 1325
                  GKRK ED+ P+ EQ EN  NP RCPVK +E YLSK P++L  R DVFYLQPE S
Sbjct: 1273 EDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPECS 1332

Query: 1326 CIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
               +SP+WY+   +DR+ LE+ML R+L V++IY++     +ED D
Sbjct: 1333 SSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD 1377


>gi|4508011 zinc finger protein 198 [Homo sapiens]
          Length = 1377

 Score =  944 bits (2441), Expect = 0.0
 Identities = 495/1125 (44%), Positives = 686/1125 (60%), Gaps = 100/1125 (8%)

Query: 288  PRMSLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
            P+   + SV Q+  +     K+TCA+C+ PLQKGQTAYQRKG   LFCS++CL++FS KP
Sbjct: 311  PKQIFQPSVQQQPTKPV---KVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKP 367

Query: 348  SGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADAT 407
            + KK C  CKK+I   K ++VAQ  S  SF EFC++ CLSLYE +Q    P  G   + +
Sbjct: 368  APKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQN---PTKG-ALNKS 423

Query: 408  RCSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGP 467
            RC+IC K  E+ HEVS  ++ H+LCSD CF+++R   GL  NCC+QCG Y+ +K    G 
Sbjct: 424  RCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSK--GAGN 481

Query: 468  ELLFHEGQQKRFCNTTCLGAYKK------------------------KNTRVYPCVWCKT 503
             +L  +GQQKRFC  +C+  YK+                        K  ++  C  C+T
Sbjct: 482  NVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQDSFLMQPEKYGKLTTCTGCRT 541

Query: 504  LCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVD 563
             C+ F+M   +  NG    +CS  C  S+K K A        C FC+R+          D
Sbjct: 542  QCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPD 601

Query: 564  RTVYQFCSPSCWTKFQ----RTSPEG------GIHLSCHYCHSLFSGKPEVLDWQDQVFQ 613
              +Y FC+ SC  KFQ    ++SP G       I L C+YC + F  KPE+L+W+++V Q
Sbjct: 602  GKLYNFCNSSCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQ 661

Query: 614  FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLG 673
            FC + C +D+K+L  +V+ CE+C++EK LHE + FSGV++ FCSEGC LLYKQDF ++LG
Sbjct: 662  FCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLG 721

Query: 674  LCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQGKLLETI 733
            L C+TC YCSQ C++G T++LDG   DFCSEDC  K+  WY KAARC  CK QG L E +
Sbjct: 722  LRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDCCKSQGTLKERV 781

Query: 734  HWRGQIRHFCNQQCLLRFYSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTV 793
             WRG+++HFC+Q CLLRFY QQN+PN+ TQ GPE+L   Q  ++     S+TK+      
Sbjct: 782  QWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQT-----SRTKM------ 830

Query: 794  RTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSK 853
                                T   PPP P P    KNKA +CKPL   +   CK  M++K
Sbjct: 831  --------------------TGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTK 870

Query: 854  GSQTEE-WKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKI 912
              QT++ W+ + + +PIPVP+++PVPMH+Y Q +PVP ++P+PVPVP+FLP  L+S++KI
Sbjct: 871  SCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKI 930

Query: 913  VETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFG 972
               IEELK K+ S+ L+ ++L M +M++E    D+  ++  ++ S      ++ + D+ G
Sbjct: 931  PAAIEELKSKVSSDALDTELLTMTDMMSE----DEGKTETTNINS------VIIETDIIG 980

Query: 973  P--ARDDVLAMAVKMANVLDEPGQDLEADFPKNPLDINPSVDFLFDCGLVGPEDVSTEQD 1030
                ++        M +V  EP  D+E DFP+   +++   +FL    + G E    EQ 
Sbjct: 981  SDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLP-PVFGEE--YEEQP 1037

Query: 1031 LPRTMRKGQKRLVLSESCSRDSMSSQPSCT-GLNYSYGVNAWKCWVQSKYANGETSKGDE 1089
             PR+ +KG KR  +S   S D  S    C+    Y+YGVNAWK WV+++  + +    DE
Sbjct: 1038 RPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDE 1097

Query: 1090 LRFGPKPMRIKEDILACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLEN 1149
            L+   K +++KED+L+ + AELNYGLA FV EI RPNGE Y PDSIYYLCLGIQ+YL  +
Sbjct: 1098 LK-SSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGS 1156

Query: 1150 NRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYSPFVLL 1209
            NR  NIF D  Y TF QELNK L +WQP++LP+ ++FSRVEE++LW  KQLG +SP  LL
Sbjct: 1157 NRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALL 1216

Query: 1210 NTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVRQRKGRDT 1269
            NTL +FNTK+FGL+T E+H++LSF  V R  +K   P        +RY   V    G D 
Sbjct: 1217 NTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKK--NPLTMENKACLRY--QVSSLCGTDN 1272

Query: 1270 ----GPGKRKREDEAPILEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERS 1325
                  GKRK ED+ P+ EQ EN  NP RCPVK +E YLSK P++L  R DVFYLQPE S
Sbjct: 1273 EDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPECS 1332

Query: 1326 CIAESPLWYSVIPMDRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
               +SP+WY+   +DR+ LE+ML R+L V++IY++     +ED D
Sbjct: 1333 SSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD 1377


>gi|44890068 zinc finger protein 262 [Homo sapiens]
          Length = 1548

 Score =  833 bits (2152), Expect = 0.0
 Identities = 480/1231 (38%), Positives = 684/1231 (55%), Gaps = 185/1231 (15%)

Query: 304  AVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSG------KKTCTFCK 357
            A   +++C+ C+  LQKGQTAYQRKG  QLFCS+ CLT ++  P+       KKTC+ C 
Sbjct: 334  ATAVRVSCSGCKKILQKGQTAYQRKGSTQLFCSTLCLTGYTVPPARPPPPLTKKTCSSCS 393

Query: 358  KEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGE 417
            K+I N KD + AQ  +  +  +FC+  CLS YE ++ +PI      + +T+CS+CQK   
Sbjct: 394  KDILNPKDVISAQFENTTTSKDFCSQSCLSTYELKK-KPIVTINTNSISTKCSMCQKNAV 452

Query: 418  VLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQK 477
            + HEV+  +VVH+LCSD+CFSKFR+   L  NCC+ CG Y Y+  GS    +L  EGQ K
Sbjct: 453  IRHEVNYQNVVHKLCSDACFSKFRSANNLTMNCCENCGGYCYS--GSGQCHMLQIEGQSK 510

Query: 478  RFCNTTCLGAYKKKNTRVYPC-----------------------VWCKTLCKNFEMLSHV 514
            +FC+++C+ AYK+K+ ++ PC                       ++C   C +   +  V
Sbjct: 511  KFCSSSCITAYKQKSAKITPCALCKSLRSSAEMIENTNSLGKTELFCSVNCLSAYRVKMV 570

Query: 515  DRNG--------KTSL---------------FCSLCCTTSYKV---KQAGLTGPPRPCSF 548
               G        KTS                FCS  C  +++    K  G+     P S 
Sbjct: 571  TSAGVQVQCNSCKTSAIPQYHLAMSDGSIRNFCSYSCVVAFQNLFNKPTGMNSSVVPLSQ 630

Query: 549  CRRSLSDPC---------YYNKVDRTVYQFCSPSCWTKFQRTSPEGG-----IHLSCHYC 594
             +  +S P            + V  T     + +   +    S   G     + L C +C
Sbjct: 631  GQVIVSIPTGSTVSAGGGSTSAVSPTSISSSAAAGLQRLAAQSQHVGFARSVVKLKCQHC 690

Query: 595  HSLFSGKPEVLDWQDQVFQFCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKS 654
            + LF+ KPE+LD++ ++FQFC ++C +++K++  V++ CE+C+ EK++ E +RFSG +KS
Sbjct: 691  NRLFATKPELLDYKGKMFQFCGKNCSDEYKKINNVMAMCEYCKIEKIVKETVRFSGADKS 750

Query: 655  FCSEGCVLLYKQDFTKKLGLCCITCTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWY 714
            FCSEGC LLYK D  K+ G  C  C+YC QT  + V   L G   +FC E+C SKY + +
Sbjct: 751  FCSEGCKLLYKHDLAKRWGNHCKMCSYCLQTSPKLVQNNLGGKVEEFCCEECMSKYTVLF 810

Query: 715  CKAARCHACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQ---------NQPNLD---- 761
             + A+C ACKRQGKL E++ WRG+++HFCN  C+L F +QQ         N  N+     
Sbjct: 811  YQMAKCDACKRQGKLSESLKWRGEMKHFCNLLCILMFCNQQSVCDPPSQNNAANISMVQA 870

Query: 762  TQSGPESLLNSQSP-----ESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAP 816
              +GP SL    +P      S    P+     NSN+V          KI +   S  T  
Sbjct: 871  ASAGPPSLRKDSTPVIANVVSLASAPAAQPTVNSNSVLQGAVPTVTAKI-IGDASTQTDA 929

Query: 817  TPPPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEW--KPQVIVLPIPVPIF 874
               PP  P    KNKA +CKP+ Q +  SCK   ++K  QTE+   +PQ+IV+P+PVP+F
Sbjct: 930  LKLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQNKECQTEDTPSQPQIIVVPVPVPVF 989

Query: 875  VPVPMHLYCQKVPVPFSMPIPVPVPMFLPTTLESTDKIVETIEELKVKIPSNPLEADILA 934
            VP+P+HLY Q  PVPF +P+P+PVPM +P++++S DK+ E+IE++K K+P++P EAD+L 
Sbjct: 990  VPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDKVTESIEDIKEKLPTHPFEADLLE 1049

Query: 935  MAEMIAEAEELDKASSD---------LCDLVSNQSAEGLLEDCDLFGPA-------RDDV 978
            MAEMIAE EE    S             D    +  +G     DL   A        +++
Sbjct: 1050 MAEMIAEDEEKKTLSQGESQTSEHELFLDTKIFEKDQGSTYSGDLESEAVSTPHSWEEEL 1109

Query: 979  LAMAVKMANVLD-----------EPGQDLEADFPKNPLD-INPSVDFLFDCGLVGPEDVS 1026
               A+K   V +           E  QDLEADFP +  D +N         G+       
Sbjct: 1110 NHYALKSNAVQEADSELKQFSKGETEQDLEADFPSDSFDPLNKGQ------GIQARSRTR 1163

Query: 1027 T--EQDLPRTMRKGQKRLVLS-----------ESCSRDSMSSQPSCTGLNYSYGVNAWKC 1073
                   P+  R+G+K+ +++           + CS   M+       L Y YGVNAWK 
Sbjct: 1164 RRHRDGFPQPRRRGRKKSIVAVEPRSLIQGAFQGCSVSGMT-------LKYMYGVNAWKN 1216

Query: 1074 WVQSKYANGE-----------------------------TSKGDELRFGPKPMRIKEDIL 1104
            WVQ K A  E                             + +  E     + +++KEDIL
Sbjct: 1217 WVQWKNAKEEQGDLKCGGVEQASSSPRSDPLGSTQDHALSQESSEPGCRVRSIKLKEDIL 1276

Query: 1105 ACSAAELNYGLAQFVREITRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTF 1164
            +C+ AEL+ GL QF++E+ RPNGE+Y+PDSI YLCLGIQQYL EN R+ NIFT+  Y  F
Sbjct: 1277 SCTFAELSLGLCQFIQEVRRPNGEKYDPDSILYLCLGIQQYLFENGRIDNIFTE-PYSRF 1335

Query: 1165 VQELNKSLSTWQPTLLPNNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQT 1224
            + EL K L  W+PT+LPN  +FSR+EEEHLWECKQLG YSP VLLNTL+FFNTK+F L+ 
Sbjct: 1336 MIELTKLLKIWEPTILPNGYMFSRIEEEHLWECKQLGAYSPIVLLNTLLFFNTKYFQLKN 1395

Query: 1225 AEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRYYAPVRQRKGR----DTGPGKRKREDEA 1280
              EH++LSF +V+R++R   T + +TK+  +R++ P+++++        G  KR  +DE 
Sbjct: 1396 VTEHLKLSFAHVMRRTR---TLKYSTKMTYLRFFPPLQKQESEPDKLTVGKRKRNEDDEV 1452

Query: 1281 PI-LEQRENRMNPLRCPVKFYEFYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPM 1339
            P+ +E  EN  NPLRCPV+ YEFYLSKC ES++ RNDVFYLQPERSC+  SP+WYS  P+
Sbjct: 1453 PVGVEMAENTDNPLRCPVRLYEFYLSKCSESVKQRNDVFYLQPERSCVPNSPMWYSTFPI 1512

Query: 1340 DRSMLESMLNRILAVREIYEELGRPGEEDLD 1370
            D   L++ML RIL VRE++EEL +   ED D
Sbjct: 1513 DPGTLDTMLTRILMVREVHEELAKAKSEDSD 1543



 Score = 58.2 bits (139), Expect = 5e-08
 Identities = 49/190 (25%), Positives = 71/190 (37%), Gaps = 19/190 (10%)

Query: 297 SQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFC 356
           SQ  G +    K+ C HC             KG    FC  +C   + K  +    C +C
Sbjct: 673 SQHVGFARSVVKLKCQHCNRLFATKPELLDYKGKMFQFCGKNCSDEYKKINNVMAMCEYC 732

Query: 357 KKEIWNTKDSVVAQT-GSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKT 415
           K E       +V +T    G+   FC+  C  LY+    +   + G+      CS C +T
Sbjct: 733 KIE------KIVKETVRFSGADKSFCSEGCKLLYKHDLAK---RWGN--HCKMCSYCLQT 781

Query: 416 GEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQ 475
              L + + G  V   C + C SK+      +   CD C      K      E L   G+
Sbjct: 782 SPKLVQNNLGGKVEEFCCEECMSKYTV-LFYQMAKCDAC------KRQGKLSESLKWRGE 834

Query: 476 QKRFCNTTCL 485
            K FCN  C+
Sbjct: 835 MKHFCNLLCI 844


>gi|115511046 zinc finger protein 258 [Homo sapiens]
          Length = 1325

 Score =  270 bits (689), Expect = 9e-72
 Identities = 191/643 (29%), Positives = 286/643 (44%), Gaps = 99/643 (15%)

Query: 304 AVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKK----PSGKKTCTFCKKE 359
           AV  K+ C+ C+  L KGQTAY + G  QLFCS+ C+T  S      P  KKTCT C K+
Sbjct: 85  AVAIKVFCSGCKKMLYKGQTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTNCSKD 144

Query: 360 IWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVL 419
           I N KD +  +  +     +FC+  CLS YE ++ +P+      + +T+CS+CQK  +  
Sbjct: 145 ILNPKDVITTRFENSYPSKDFCSQSCLSSYELKK-KPVVTIYTKSISTKCSMCQKNADTR 203

Query: 420 HEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRF 479
            EV   +VVH LCSD+CFSKF +   L  NCC+ CG+Y Y+ +G           Q ++ 
Sbjct: 204 FEVKYQNVVHGLCSDACFSKFHSTNNLTMNCCENCGSYCYSSSG---------PCQSQKV 254

Query: 480 CNTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGL 539
            ++T + AYK+ + ++ P    K+L  + EM+   + +GKT LFCS+ C ++Y+VK    
Sbjct: 255 FSSTSVTAYKQNSAQIPPYALGKSLRPSAEMIETTNDSGKTELFCSINCLSAYRVKTVTS 314

Query: 540 TGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQR--TSPEG----GIHL---- 589
           +G    C  C+ S     +    + T+Y FCS SC   FQ   + P+G     + L    
Sbjct: 315 SGVQVSCHSCKTSAIPQYHLAMSNGTIYSFCSSSCVVAFQNVFSKPKGTNSSAVPLSQGQ 374

Query: 590 ------SCHYCHSLFSG-----KPEVLDWQDQVFQFCCRDCCEDFKRLRGVVS-QCEHCR 637
                 S     S+  G      P  +            +  +       VV  +C+HC 
Sbjct: 375 VVVSPPSSRSAVSIGGGNTSAVSPSSIRGSAAASLQPLAEQSQQVALTHTVVKLKCQHCN 434

Query: 638 QEKLLHEKLRF-SGVEKSFCSEGCVLLYKQDFTKKLGLC--C--------------ITCT 680
                  +L F  G    FC + C   YK+   K + +C  C              +   
Sbjct: 435 HLFATKPELLFYKGKMFLFCGKNCSDEYKKK-NKVVAMCDYCKLQKIIKETVRFSGVDKP 493

Query: 681 YCSQTCQ--------------------------RGVTEQLDGSTWDFCSEDCKSKYLLWY 714
           +CS+ C+                            V  +L+G   +FC EDC SK+ + +
Sbjct: 494 FCSEVCKFLSARDFGERWGNYCKMCSYCSQTSPNLVENRLEGKLEEFCCEDCMSKFTVLF 553

Query: 715 CKAARCHACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQ--------QNQPNLDTQSGP 766
            + A+C  CKRQGKL E+I WRG I+HFCN  C+L F  Q        QN+ N+      
Sbjct: 554 YQMAKCDGCKRQGKLSESIKWRGNIKHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTA 613

Query: 767 ESLLNSQSPESKP---------QTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPT 817
            + L S   ++ P         + P+     N+N+V          KI     +   A  
Sbjct: 614 VTELPSARTDTTPVITSVMSLAKIPATLSTGNTNSVLKGAVTKEAAKIIQDESTQEDAMK 673

Query: 818 PP--PPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTE 858
            P      P+   KNK   CKP+ Q +  SCK   + K  QT+
Sbjct: 674 FPSSQSSQPSRLLKNKGISCKPVTQTKATSCKPHTQHKECQTD 716



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 47/190 (24%), Positives = 65/190 (34%), Gaps = 19/190 (10%)

Query: 297 SQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFC 356
           SQ+   +    K+ C HC             KG   LFC  +C   + KK      C +C
Sbjct: 416 SQQVALTHTVVKLKCQHCNHLFATKPELLFYKGKMFLFCGKNCSDEYKKKNKVVAMCDYC 475

Query: 357 KKEIWNTKDSVVAQT-GSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKT 415
           K +       ++ +T    G    FC+ VC  L      R   +         CS C +T
Sbjct: 476 KLQ------KIIKETVRFSGVDKPFCSEVCKFL----SARDFGERWGNY-CKMCSYCSQT 524

Query: 416 GEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQ 475
              L E      +   C + C SKF      +   CD C      K      E +   G 
Sbjct: 525 SPNLVENRLEGKLEEFCCEDCMSKFTV-LFYQMAKCDGC------KRQGKLSESIKWRGN 577

Query: 476 QKRFCNTTCL 485
            K FCN  C+
Sbjct: 578 IKHFCNLFCV 587


>gi|38570099 glutamine-rich 1 [Homo sapiens]
          Length = 776

 Score =  253 bits (647), Expect = 7e-67
 Identities = 137/300 (45%), Positives = 185/300 (61%), Gaps = 15/300 (5%)

Query: 1067 GVNAWKCWVQSKYANGETSKGDELRFGP----KPMRIKEDILACSAAELNYGLAQFVREI 1122
            G+  WK W Q+K  N E  K  + R  P    + +R +ED+++ + AELNYGL    RE 
Sbjct: 478  GLEVWKNWAQTK--NAELEKDAQNRLAPIGRRQLLRFQEDLISSAVAELNYGLCLMTREA 535

Query: 1123 TRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPN 1182
                GE Y+PD +YY+ L IQ+YL EN R+ +IF+DLYY+ F + L++ L   QP + P 
Sbjct: 536  RNGEGEPYDPDVLYYIFLCIQKYLFENGRVDDIFSDLYYVRFTEWLHEVLKDVQPRVTPL 595

Query: 1183 NTVF-SRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSR 1241
              V  S V EE LWECKQLG +SP  LL TLMFFNTK+F L+T ++HM+L+F+ V+RQ++
Sbjct: 596  GYVLPSHVTEEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTK 655

Query: 1242 KCTTPRGTTKVVSIRYYAPVRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYE 1301
            K        K  SIRY   +   +      G++  +D     EQ EN  NPLRCP+K Y+
Sbjct: 656  K-NPSNPKDKSTSIRYLKALGIHQ-----TGQKVTDDM--YAEQTENPENPLRCPIKLYD 707

Query: 1302 FYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEEL 1361
            FYL KCP+S++ RND FYL PE      SP+WYSV P+ R  +  ML RIL +REI E +
Sbjct: 708  FYLFKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQPISREQMGQMLTRILVIREIQEAI 767


>gi|38570097 glutamine-rich 1 [Homo sapiens]
          Length = 776

 Score =  253 bits (647), Expect = 7e-67
 Identities = 137/300 (45%), Positives = 185/300 (61%), Gaps = 15/300 (5%)

Query: 1067 GVNAWKCWVQSKYANGETSKGDELRFGP----KPMRIKEDILACSAAELNYGLAQFVREI 1122
            G+  WK W Q+K  N E  K  + R  P    + +R +ED+++ + AELNYGL    RE 
Sbjct: 478  GLEVWKNWAQTK--NAELEKDAQNRLAPIGRRQLLRFQEDLISSAVAELNYGLCLMTREA 535

Query: 1123 TRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLPN 1182
                GE Y+PD +YY+ L IQ+YL EN R+ +IF+DLYY+ F + L++ L   QP + P 
Sbjct: 536  RNGEGEPYDPDVLYYIFLCIQKYLFENGRVDDIFSDLYYVRFTEWLHEVLKDVQPRVTPL 595

Query: 1183 NTVF-SRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSR 1241
              V  S V EE LWECKQLG +SP  LL TLMFFNTK+F L+T ++HM+L+F+ V+RQ++
Sbjct: 596  GYVLPSHVTEEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTK 655

Query: 1242 KCTTPRGTTKVVSIRYYAPVRQRKGRDTGPGKRKREDEAPILEQRENRMNPLRCPVKFYE 1301
            K        K  SIRY   +   +      G++  +D     EQ EN  NPLRCP+K Y+
Sbjct: 656  K-NPSNPKDKSTSIRYLKALGIHQ-----TGQKVTDDM--YAEQTENPENPLRCPIKLYD 707

Query: 1302 FYLSKCPESLRTRNDVFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRILAVREIYEEL 1361
            FYL KCP+S++ RND FYL PE      SP+WYSV P+ R  +  ML RIL +REI E +
Sbjct: 708  FYLFKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQPISREQMGQMLTRILVIREIQEAI 767


>gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]
          Length = 1142

 Score =  171 bits (433), Expect = 4e-42
 Identities = 94/234 (40%), Positives = 130/234 (55%), Gaps = 7/234 (2%)

Query: 303 SAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSG----KKTCTFCKK 358
           S    +++CA C+  LQKGQTAYQRKG  QLFCS  C+T +    S     K+TC+ C K
Sbjct: 81  STTAIQVSCAGCKKILQKGQTAYQRKGSAQLFCSIPCITEYISSASSPVPSKRTCSNCSK 140

Query: 359 EIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEV 418
           +I N KD +  Q     S   FC+  CLS YE ++++P       +  T+CS+CQKT  +
Sbjct: 141 DILNPKDVISVQLEDTTSCKTFCSLSCLSSYE-EKRKPFVTICTNSILTKCSMCQKTAII 199

Query: 419 LHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKR 478
            +EV   +V H LCS++C SKF +      NCC+ CG Y Y  T S    +L  EGQ   
Sbjct: 200 QYEVKYQNVKHNLCSNACLSKFHSANNFIMNCCENCGTYCY--TSSSLSHILQMEGQSHY 257

Query: 479 FCNTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSY 532
           F ++  + AYK+K  +    V CK L  + EM+      GKT LFCS+ C ++Y
Sbjct: 258 FNSSKSITAYKQKPAKPLISVPCKPLKPSDEMIETTSDLGKTELFCSINCFSAY 311



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 53/258 (20%), Positives = 95/258 (36%), Gaps = 47/258 (18%)

Query: 498 CVWCKTLCKNFEMLSHVDRNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLSDPC 557
           C  CK + +  +  +   R G   LFCS+ C T Y    +      R CS C + + +P 
Sbjct: 89  CAGCKKILQKGQ--TAYQRKGSAQLFCSIPCITEYISSASSPVPSKRTCSNCSKDILNPK 146

Query: 558 YYNKVD----RTVYQFCSPSCWTKFQRTSPEGGIHLSCHYCHSLFSGKPEVLDWQDQVFQ 613
               V      +   FCS SC + ++                     KP         F 
Sbjct: 147 DVISVQLEDTTSCKTFCSLSCLSSYEE------------------KRKP---------FV 179

Query: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLG 673
             C +          ++++C  C++  ++  ++++  V+ + CS  C+  +       + 
Sbjct: 180 TICTN---------SILTKCSMCQKTAIIQYEVKYQNVKHNLCSNACLSKF-HSANNFIM 229

Query: 674 LCCITC-TYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCK---AARCHACKRQGKL 729
            CC  C TYC  +       Q++G +  F S    + Y     K   +  C   K   ++
Sbjct: 230 NCCENCGTYCYTSSSLSHILQMEGQSHYFNSSKSITAYKQKPAKPLISVPCKPLKPSDEM 289

Query: 730 LETIHWRGQIRHFCNQQC 747
           +ET    G+   FC+  C
Sbjct: 290 IETTSDLGKTELFCSINC 307



 Score = 33.9 bits (76), Expect = 1.1
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 15/121 (12%)

Query: 650 GVEKSFCSEGCVLLYKQDFTKKLGLCCITCTYCSQTCQRG---VTEQLDGSTW--DFCSE 704
           G  + FCS  C+  Y    +  +     TC+ CS+        ++ QL+ +T    FCS 
Sbjct: 107 GSAQLFCSIPCITEYISSASSPVP-SKRTCSNCSKDILNPKDVISVQLEDTTSCKTFCSL 165

Query: 705 DCKSKY------LLWYCKAA---RCHACKRQGKLLETIHWRGQIRHFCNQQCLLRFYSQQ 755
            C S Y       +  C  +   +C  C++   +   + ++    + C+  CL +F+S  
Sbjct: 166 SCLSSYEEKRKPFVTICTNSILTKCSMCQKTAIIQYEVKYQNVKHNLCSNACLSKFHSAN 225

Query: 756 N 756
           N
Sbjct: 226 N 226



 Score = 32.3 bits (72), Expect = 3.2
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 20/140 (14%)

Query: 311 CAHC-RTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTC-----TFCKKEIWNTK 364
           C+ C +T + + +  YQ   +    CS++CL+ F    +    C     T+C      T 
Sbjct: 190 CSMCQKTAIIQYEVKYQN--VKHNLCSNACLSKFHSANNFIMNCCENCGTYCY-----TS 242

Query: 365 DSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLHEVSN 424
            S+       G  H F +S  ++ Y+ +  +P+        +  C   + + E++   S+
Sbjct: 243 SSLSHILQMEGQSHYFNSSKSITAYKQKPAKPLI-------SVPCKPLKPSDEMIETTSD 295

Query: 425 GSVVHRLCSDSCFSKFRANK 444
                  CS +CFS +   K
Sbjct: 296 LGKTELFCSINCFSAYSKAK 315


>gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens]
          Length = 669

 Score =  161 bits (408), Expect = 3e-39
 Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 6/183 (3%)

Query: 308 KMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSV 367
           K+TCA+C+ PLQKGQTAYQRKG   LFCS++CL++FS K +       CKK+    K +V
Sbjct: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300

Query: 368 VAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLHEVSNGSV 427
           +    S  SF EF ++ CLS  E              + +RC+IC K  E+ HEVS  +V
Sbjct: 301 ILPVESSKSFQEFYSTSCLSPCENNWN----LKKGVFNKSRCTICSKLAEIRHEVSVNNV 356

Query: 428 VHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFCNTTCLGA 487
            H+LCS+ CF+K+R   GL  NCC+ CG Y+ +K  S G  +L   GQQKRFC  +C+  
Sbjct: 357 THKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSK--STGNNILVIGGQQKRFCCQSCINE 414

Query: 488 YKK 490
           YK+
Sbjct: 415 YKQ 417



 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 473 EGQQKRFCNTTCLGAYKKKNTRVYPCVWCK--TLCKNFEMLSHVDRNGKTSLF----CSL 526
           +G    FC+TTCL ++  K T+    + CK     K   ++  V+ +     F    C  
Sbjct: 261 KGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLS 320

Query: 527 CCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGG 586
            C  ++ +K+ G+    R C+ C + L++  +   V+   ++ CS  C+ K++  +  G 
Sbjct: 321 PCENNWNLKK-GVFNKSR-CTICSK-LAEIRHEVSVNNVTHKLCSNHCFNKYRLAN--GL 375

Query: 587 IHLSCHYCHSLFSGKP---EVLDWQDQVFQFCCRDCCEDFKRL 626
           I   C +C      K     +L    Q  +FCC+ C  ++K++
Sbjct: 376 IMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQM 418



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 17/163 (10%)

Query: 516 RNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLS----DPCYYNKVDRTVYQFCS 571
           R G   LFCS  C +S+  K+   T        C++  S    +     +  ++  +F S
Sbjct: 260 RKGSAHLFCSTTCLSSFSHKRTQNT----RSIICKKDASTKKANVILPVESSKSFQEFYS 315

Query: 572 PSCWTKFQR--TSPEGGIHLS-CHYCHSLFSGKPEVLDWQDQVFQFCCRDCCEDFKRLRG 628
            SC +  +      +G  + S C  C  L   + EV    +   + C   C   ++   G
Sbjct: 316 TSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEV-SVNNVTHKLCSNHCFNKYRLANG 374

Query: 629 VVSQ-CEHCRQ----EKLLHEKLRFSGVEKSFCSEGCVLLYKQ 666
           ++   CEHC +    +   +  L   G +K FC + C+  YKQ
Sbjct: 375 LIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417



 Score = 36.6 bits (83), Expect = 0.17
 Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 37/224 (16%)

Query: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKS-----FCSEGCVLLYKQDF 668
           FC   C   F   R   ++   C+++    +      VE S     F S  C+   + ++
Sbjct: 267 FCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNW 326

Query: 669 TKKLGLCCIT-CTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQG 727
             K G+   + CT CS+  +      ++  T   CS  C +KY L       C  C+  G
Sbjct: 327 NLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNC--CEHCG 384

Query: 728 KLLET-------IHWRGQIRHFCNQQCLLRF------------YSQQNQPNLDTQSGPES 768
           + + +       +   GQ + FC Q C+  +             S+  + N   +   + 
Sbjct: 385 EYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQ 444

Query: 769 LLNSQS---------PESKPQTPS-QTKVENSNTVRTPEENGNL 802
           L  S +         PE K +T   Q  VE        +EN NL
Sbjct: 445 LYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLLIQENVNL 488



 Score = 30.8 bits (68), Expect = 9.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 677 ITCTYCSQTCQRGVTE-QLDGSTWDFCSEDCKSKYLLWYCKAARCHACKR 725
           ITC  C +  Q+G T  Q  GS   FCS  C S +     +  R   CK+
Sbjct: 242 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKK 291


>gi|89001100 zinc finger protein 237 isoform 1 [Homo sapiens]
          Length = 382

 Score = 90.5 bits (223), Expect = 1e-17
 Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 4/111 (3%)

Query: 308 KMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSV 367
           K+TCA+C+ PLQKGQTAYQRKG   LFCS++CL++FS K +       CKK+    K +V
Sbjct: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300

Query: 368 VAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEV 418
           +    S  SF EF ++ CLS  E              + +RC+IC K  EV
Sbjct: 301 ILPVESSKSFQEFYSTSCLSPCENNWN----LKKGVFNKSRCTICSKLAEV 347



 Score = 30.8 bits (68), Expect = 9.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 677 ITCTYCSQTCQRGVTE-QLDGSTWDFCSEDCKSKYLLWYCKAARCHACKR 725
           ITC  C +  Q+G T  Q  GS   FCS  C S +     +  R   CK+
Sbjct: 242 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKK 291


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 66/234 (28%), Positives = 90/234 (38%), Gaps = 38/234 (16%)

Query: 32  EDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS 91
           ED+ + ++       P GPSP  G     + P G    PG   G       GG   + P 
Sbjct: 21  EDVSQEESPSLIAGNPQGPSPQGG-----NKPQGPPPPPGKPQGPPP---QGGNKPQGPP 72

Query: 92  PPEVDHGPEGTLAWDAGDQTLEP--------GP---GGQTPEVVPPDPGAGANSCSPEGL 140
           PP    GP        GD++  P        GP   GG  P+  PP PG       P+G 
Sbjct: 73  PPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK-PQGPPPQGG 126

Query: 141 LEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEE-ELPQG--QPQSPNAPPSPSVGE 197
             P  P  P   Q P  + +++ S     R  PG+ +   PQG  QPQ P  PP    G 
Sbjct: 127 NRPQGPPPPGKPQGPPPQGDKSRS----PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 182

Query: 198 TLGDGINSSQTKPGGSSPPAHP-SLPGDGLTAKASEKPPERKRSERVRRAEPPK 250
               G      KP G  PP  P   P  G  +++S+ PP + +    +    P+
Sbjct: 183 PPQGG-----KKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ 231



 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 59/220 (26%), Positives = 76/220 (34%), Gaps = 48/220 (21%)

Query: 47  PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
           P GP P  G     + P G    PG   G       GG   + P PP    GP       
Sbjct: 97  PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNRPQGPPPPGKPQGPP-----P 143

Query: 107 AGDQTLEP--------GP---GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSP 155
            GD++  P        GP   GG  P+  PP PG       P+G  +P  P  P   Q P
Sbjct: 144 QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGKKPQGPPPPGKPQGP 202

Query: 156 HIEEEETTSIATAR---RGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGG 212
             + +++ S  +     +G P Q    PQG P  P  P  P               KP G
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP---------QGGNKPQG 253

Query: 213 SSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
             PP  P  P           P +     +  R+ P KP+
Sbjct: 254 PPPPGKPQGP-----------PAQGGSKSQSARSPPGKPQ 282



 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 52/185 (28%), Positives = 71/185 (38%), Gaps = 25/185 (13%)

Query: 47  PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGP--EGTLA 104
           P GP P  G     + P G    PG   G       GG   + P PP    GP  +G  +
Sbjct: 158 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGKKPQGPPPPGKPQGPPPQGDKS 209

Query: 105 WDAGDQTLEP-GP---GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE 160
             +     +P GP   GG  P+  PP PG       P+G  +P  P  P   Q P     
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGP---PA 265

Query: 161 ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS 220
           +  S + + R  PG+ +  PQ +  +P  PP P+ G       N  Q +   +  P  P 
Sbjct: 266 QGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG-------NPQQPQAPPAGQPQGPP 318

Query: 221 LPGDG 225
            P  G
Sbjct: 319 RPPQG 323



 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 26/143 (18%)

Query: 114 PGP-GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGS 172
           P P GG  P+  PP PG       P+G  +P  P  P   Q P  + +++ S     R  
Sbjct: 39  PSPQGGNKPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQGDKSRS----PRSP 93

Query: 173 PGQEE-ELPQG--QPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAK 229
           PG+ +   PQG  QPQ P  PP    G     G      +P G  PP  P  P       
Sbjct: 94  PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG-----NRPQGPPPPGKPQGP------- 141

Query: 230 ASEKPPERKRSERVRRAEPPKPE 252
               PP+  +S R  R+ P KP+
Sbjct: 142 ----PPQGDKS-RSPRSPPGKPQ 159



 Score = 35.4 bits (80), Expect = 0.38
 Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 21/109 (19%)

Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGI 203
           LA  S   L     +EE  + IA   +G   Q    PQG P  P  P  P          
Sbjct: 11  LALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP--------- 61

Query: 204 NSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
                KP G  PP  P  P           PP+  +S R  R+ P KP+
Sbjct: 62  PQGGNKPQGPPPPGKPQGP-----------PPQGDKS-RSPRSPPGKPQ 98



 Score = 32.0 bits (71), Expect = 4.2
 Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 25/95 (26%)

Query: 771 NSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK- 829
           +SQSP  KPQ P             P + GN           P  P PPP  P   P + 
Sbjct: 211 SSQSPPGKPQGP-------------PPQGGN----------QPQGPPPPPGKPQGPPPQG 247

Query: 830 -NKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
            NK     P  + +G   +   KS+ +++   KPQ
Sbjct: 248 GNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQ 282


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 60.8 bits (146), Expect = 8e-09
 Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 45/228 (19%)

Query: 38  QTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH 97
           Q  P+    P GP P  G     + P G    PG   G       GG   + P PP    
Sbjct: 48  QGPPSPPGKPQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGKPQ 99

Query: 98  GPEGTLAWDAGDQTLEP--------GP---GGQTPEVVPPDPGAGANSCSPEGLLEPLAP 146
           GP        GD++  P        GP   GG  P+  PP PG       P+G  +P  P
Sbjct: 100 GPP-----PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGP 153

Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEEELPQG--QPQSPNAPPSPSVGETLGDGIN 204
             P   Q P  + +  +  + +  G P  +   PQG  QPQ P  PP    G     G  
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKP--QGPPPQGGNQPQGPPPPPGKPQGPPPQGG-- 209

Query: 205 SSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
               KP G  PP  P  P           PP+     +  R+ P KP+
Sbjct: 210 ---NKPQGPPPPGKPQGP-----------PPQGDNKSQSARSPPGKPQ 243



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 61/215 (28%), Positives = 75/215 (34%), Gaps = 36/215 (16%)

Query: 47  PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGP------- 99
           P GP P  G     + P G    PG   G       GG   + P PP    GP       
Sbjct: 118 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGKPQGPPPQGDNK 169

Query: 100 EGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEE 159
             +     G     P  GG  P+  PP PG       P+G  +P  P  P   Q P  + 
Sbjct: 170 SRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQG 228

Query: 160 EETTSIATARRGSPGQEEELPQG--QPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPA 217
           +  +  A +  G P  +   PQG  QPQ P  PP    G     G      KP G  PP 
Sbjct: 229 DNKSQSARSPPGKP--QGPPPQGGNQPQGPPPPPGKPQGPPPQGG-----NKPQGPPPPG 281

Query: 218 HPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
            P  P           PP+     R  R+ P KP+
Sbjct: 282 KPQGP-----------PPQGGSKSRSSRSPPGKPQ 305



 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 62/216 (28%), Positives = 76/216 (35%), Gaps = 38/216 (17%)

Query: 47  PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGP------- 99
           P GP P  G     + P G    PG   G       GG   + P PP    GP       
Sbjct: 180 PQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGKPQGPPPQGDNK 231

Query: 100 EGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEE 159
             +     G     P  GG  P+  PP PG       P+G  +P  P  P   Q P    
Sbjct: 232 SQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGP---P 287

Query: 160 EETTSIATARRGSPGQEE-ELPQG--QPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPP 216
            +  S + + R  PG+ +   PQG  QPQ P  PP    G     G      KP G  PP
Sbjct: 288 PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG-----NKPQGPPPP 342

Query: 217 AHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
             P  P           PP+     R  R+ P KP+
Sbjct: 343 GKPQGP-----------PPQGGSKSRSARSPPGKPQ 367



 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 53/197 (26%), Positives = 72/197 (36%), Gaps = 26/197 (13%)

Query: 36  ESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV 95
           +SQ+A +    P GP P  G     + P G    PG   G       GG   + P PP  
Sbjct: 231 KSQSARSPPGKPQGPPPQGG-----NQPQGPPPPPGKPQGPPPQ---GGNKPQGPPPPGK 282

Query: 96  DHGPEGTLAWDAGDQTLEPGP-------GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
             GP       +      PG        GG  P+  PP PG       P+G  +P  P  
Sbjct: 283 PQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPP 341

Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQT 208
           P   Q P     +  S + + R  PG+ +  PQ +  +P  PP P+ G       N  Q 
Sbjct: 342 PGKPQGP---PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGG-------NPQQP 391

Query: 209 KPGGSSPPAHPSLPGDG 225
           +   +  P  P  P  G
Sbjct: 392 QAPPAGQPQGPPRPPQG 408



 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 47/169 (27%), Positives = 60/169 (35%), Gaps = 43/169 (25%)

Query: 107 AGDQTLEPGPGGQTPEVVPPDPG-------AGANSCS-------------PEGLLEPLAP 146
           AG+    P  GG  P+  P  PG        G N                P+G  +P  P
Sbjct: 33  AGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 92

Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEE-ELPQG--QPQSPNAPPSPSVGETLGDGI 203
             P   Q P  + +++ S     R  PG+ +   PQG  QPQ P  PP    G     G 
Sbjct: 93  PPPGKPQGPPPQGDKSRS----PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG- 147

Query: 204 NSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
                KP G  PP  P  P           PP+     R  R+ P KP+
Sbjct: 148 ----NKPQGPPPPGKPQGP-----------PPQGDNKSRSSRSPPGKPQ 181



 Score = 40.8 bits (94), Expect = 0.009
 Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPS-PSVGETLGDG 202
           LA  S   L     +EE  + IA   +G+P Q    PQG P  P  P   P  G     G
Sbjct: 11  LALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQG 70

Query: 203 INSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
                 KP G  P       G     K    PP+  +S R  R+ P KP+
Sbjct: 71  PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKS-RSPRSPPGKPQ 119



 Score = 34.7 bits (78), Expect = 0.65
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
           P  KPQ P       S + R+P   G     P +  + P  P PPP  P   P +  NK 
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 274

Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
               P  + +G   +   KS+ S++   KPQ
Sbjct: 275 QGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ 305



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
           P  KPQ P       S + R+P   G     P +  + P  P PPP  P   P +  NK 
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212

Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
               P  + +G   + + KS+ +++   KPQ
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQ 243



 Score = 32.7 bits (73), Expect = 2.5
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
           P  KPQ P   + + S + R+P   G     P +  + P  P PPP  P   P +  NK 
Sbjct: 94  PPGKPQGPPP-QGDKSRSPRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150

Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
               P  + +G   + + KS+ S++   KPQ
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQ 181



 Score = 32.7 bits (73), Expect = 2.5
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRK--NKA 832
           P  KPQ P       S + R+P   G     P +  + P  P PPP  P   P +  NK 
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 336

Query: 833 AMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQ 863
               P  + +G   +   KS+ +++   KPQ
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSPPGKPQ 367


>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
           preproprotein [Homo sapiens]
          Length = 198

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 51/194 (26%), Positives = 72/194 (37%), Gaps = 24/194 (12%)

Query: 32  EDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS 91
           ED+ + ++       P GPSP  G     + P G    PG   G       GG   + P 
Sbjct: 21  EDVSQEESPSLIAGNPQGPSPQGG-----NKPQGPPPPPGKPQGPPPQ---GGNKPQGPP 72

Query: 92  PPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPIT 151
           PP    GP        GD++  P      P+  PP  G       P+G  +P  P  P  
Sbjct: 73  PPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQ-GGKPQGPPPQGGNKPQGPPPPGK 126

Query: 152 LQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPG 211
            Q P     +  S + + R  PG+ +  PQ +  +P  PP P+ G       N  Q +  
Sbjct: 127 PQGP---PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG-------NPQQPQAP 176

Query: 212 GSSPPAHPSLPGDG 225
            +  P  P  P  G
Sbjct: 177 PAGQPQGPPRPPQG 190



 Score = 35.8 bits (81), Expect = 0.29
 Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGI 203
           LA  S   L     +EE  + IA   +G   Q    PQG P  P  P  P          
Sbjct: 11  LALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP--------- 61

Query: 204 NSSQTKPGGSSPPAHP-SLPGDGLTAKASEKPPERKRSERVRRAEPPKP 251
                KP G  PP  P   P  G  +++   PP + +    +  +P  P
Sbjct: 62  PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP 110


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 64/225 (28%), Positives = 86/225 (38%), Gaps = 45/225 (20%)

Query: 85  LLYKAPSPPEVDHGPEGTLAWDAG------DQTLEPGPGGQTPEVVP-PDPGAGANSCSP 137
           ++  AP PP  D  P   +A  AG      D    P P  Q P   P   PG  ++   P
Sbjct: 722 VIVSAP-PPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLP 780

Query: 138 EGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPS----- 192
                PL  DSP  L SPH                P +    P  +PQS + PPS     
Sbjct: 781 HQA--PLG-DSP-HLPSPH----------------PTRPPSRPPSRPQSVSRPPSEPPLH 820

Query: 193 ----PSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEP 248
               P    TL  GI   Q + G   P ++P+      TA    +PP R +S+      P
Sbjct: 821 PCPPPQAPPTL-PGIFVIQNQLGVPPPASNPAP-----TAPGPPQPPLRPQSQPPEGPLP 874

Query: 249 PKPEV-VDSTESIPVSDEDSDAMVDDPNDEDF-VPFRPRRSPRMS 291
           P P +   ST S   S  ++ + +  P   DF + F P + P  S
Sbjct: 875 PAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKS 919



 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 64/272 (23%), Positives = 96/272 (35%), Gaps = 44/272 (16%)

Query: 18  KPLAGDLPVDMEFGEDLLESQTAPTRGWAPP---GPSPSSGALDLLDTPAGL-------- 66
           +P    +PV +  G    +SQ AP    A     G +    A+ +L+TP GL        
Sbjct: 551 QPALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAA 610

Query: 67  -----------EKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPG 115
                      +  P      +  L LG    +A  PP+    P    A      T +P 
Sbjct: 611 ATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQA---PTPQAAAPPQATTPQPS 667

Query: 116 PG-GQTPE--VVPPDPGAGANSCSPEGLLEPLAPDS----PITLQSPHIEEEETTSI--- 165
           PG   +PE  V+   P A   +   +  L+   P      P++ + PH+    +  +   
Sbjct: 668 PGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAP 727

Query: 166 --------ATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPA 217
                   AT      G   + P  Q     AP  P+     G G +SS + P  +    
Sbjct: 728 PPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGD 787

Query: 218 HPSLPGDGLTAKASEKPPERKRSERVRRAEPP 249
            P LP    T   S +PP R +S     +EPP
Sbjct: 788 SPHLPSPHPTRPPS-RPPSRPQSVSRPPSEPP 818



 Score = 33.9 bits (76), Expect = 1.1
 Identities = 39/140 (27%), Positives = 51/140 (36%), Gaps = 25/140 (17%)

Query: 775 PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPP------PPATPR 828
           P++ P  P    ++N            LG  P  +  APTAP PP PP      PP  P 
Sbjct: 825 PQAPPTLPGIFVIQNQ-----------LGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPL 873

Query: 829 KNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVP---MHLYCQK 885
              A    P   +  V+   E  S+         Q+   P   P   P P   +HL    
Sbjct: 874 P-PAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHL---- 928

Query: 886 VPVPFSMPIPVPVPMFLPTT 905
           VP P + P P P    + TT
Sbjct: 929 VPEPAAPPPPPPRTFQMVTT 948



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 38/168 (22%), Positives = 61/168 (36%), Gaps = 20/168 (11%)

Query: 765 GPESLLNSQSPESKPQTPSQTKVENSNTVRTPE--ENGNLGKIPVKTRSAPTAPTPPPPP 822
           GP++  +  SP   PQ P+   ++      +P       LG        +P  P+P P  
Sbjct: 746 GPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLG-------DSPHLPSPHPTR 798

Query: 823 PPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIV----LPIPVPIFVPVP 878
           PP+ P     ++ +P  +     C         Q     P + V    L +P P   P P
Sbjct: 799 PPSRPPSRPQSVSRPPSEPPLHPC------PPPQAPPTLPGIFVIQNQLGVPPPASNPAP 852

Query: 879 MHLYCQKVPV-PFSMPIPVPVPMFLPTTLESTDKIVETIEELKVKIPS 925
                 + P+ P S P   P+P        ST   V +  E   ++P+
Sbjct: 853 TAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPA 900



 Score = 32.0 bits (71), Expect = 4.2
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 125 PPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELP-QGQ 183
           PP P     S  PEG L P     P +  S      ET+S   A   S  Q +  P QG 
Sbjct: 857 PPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGP 916

Query: 184 PQSPNAPPS 192
            +SP  PP+
Sbjct: 917 HKSPTPPPT 925



 Score = 30.8 bits (68), Expect = 9.3
 Identities = 57/258 (22%), Positives = 80/258 (31%), Gaps = 32/258 (12%)

Query: 10  FDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGAL-----DLLDTPA 64
           F P    ++PL+ + P  +     ++ S   P +  AP  P      L     D   +PA
Sbjct: 699 FLPQERSQQPLSAEGP-HLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPA 757

Query: 65  GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVV 124
              + P     A  L G G       S P + H          GD    P P    P   
Sbjct: 758 PAPQIPA----AAPLKGPG-----PSSSPSLPHQAP------LGDSPHLPSPHPTRPPSR 802

Query: 125 PPDPGAGANSCSPEGLLEPLAP-DSPITLQSPHIEEEET-----TSIATARRGSPGQEEE 178
           PP      +    E  L P  P  +P TL    + + +       S        P Q   
Sbjct: 803 PPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPL 862

Query: 179 LPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS-----LPGDGLTAKASEK 233
            PQ QP     PP+P +  +      +S ++     P   PS      P      K+   
Sbjct: 863 RPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTP 922

Query: 234 PPERKRSERVRRAEPPKP 251
           PP            PP P
Sbjct: 923 PPTLHLVPEPAAPPPPPP 940


>gi|55741647 hypothetical protein LOC158405 [Homo sapiens]
          Length = 716

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 23/176 (13%)

Query: 1066 YGVNAWKCWVQSKYANGETSKGDELRFGPKPMRIKEDILACSAAELNYGLAQFVREITRP 1125
            Y +N W+ W  +      T                 DI    A +LN  L  F   + + 
Sbjct: 426  YALNVWRYWCMTNGLKDHT-----------------DITKIPAVKLNELLENFYVTVKKS 468

Query: 1126 NGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSTWQPTLLP---- 1181
            +G  +   S++ +  G+ + +L+N  +    T   + +  ++L + L       +     
Sbjct: 469  DGSDFLATSLHAIRRGLDR-ILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARS 527

Query: 1182 -NNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNV 1236
             N   FS  +EE +W+   LG  SP  LL+T++ +N+++  ++T +EH  L + ++
Sbjct: 528  RNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDI 583


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 50/237 (21%)

Query: 31  GEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYK- 88
           G   L ++  P  G  P PGP P  G       PAG    PG    A  L G   LL   
Sbjct: 162 GPAALAARAGPGPGPGPGPGPGPGPGK------PAG----PGA---AQTLNGSAALLNSH 208

Query: 89  ---APSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVV----PPDPGAGANSCSPE--- 138
              AP+   V++GP   L      +   PG   QTP  V    PP P A +   +P    
Sbjct: 209 HAAAPAVSLVNNGPAALLPLP---KPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAA 265

Query: 139 -GLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGE 197
                P  P +P TL  P                 PG     P G P +  A P P+  +
Sbjct: 266 PAAAPPPPPPAPATLARP-----------------PGH----PAGPPTAAPAVPPPAAAQ 304

Query: 198 TLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVV 254
             G    +    P    P      PG G  A A     + +  +RV +A PP  + +
Sbjct: 305 NGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTL 361



 Score = 31.2 bits (69), Expect = 7.1
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 17/68 (25%)

Query: 764 SGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTP----- 818
           +GP +LL    P  KP  P          ++TP   G          S P AP P     
Sbjct: 220 NGPAALL----PLPKPAAPG-------TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA 268

Query: 819 -PPPPPPA 825
            PPPPPPA
Sbjct: 269 APPPPPPA 276


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
           sapiens]
          Length = 1751

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 29/198 (14%)

Query: 48  PGPSPSSGALDLLDTPAG---LEKDPGVLDGATELLGLGGLLYKAPSP--PEVDHGPEGT 102
           PGP   +G       P G   L   PG+    + L   G  L   P P  P    G +GT
Sbjct: 763 PGPPGRAG-------PPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGT 815

Query: 103 LAWDA--GDQTLEPGPGGQTPEVVPPDPG----AGANSCSPEGLLEPLAPDSPITLQSPH 156
              D   GD   +  PG   P+  P  PG     G       G   P  P  P     P 
Sbjct: 816 PGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPS 875

Query: 157 IEEEETTSIATARRGSPGQEEEL--PQGQPQSPNAPPSPSV-GETLGDGINSSQTK---- 209
              ++ T I     G  G  E L  P+G P  P  P  P + GE    G+NSS       
Sbjct: 876 FRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAG 935

Query: 210 ----PGGSSPPAHPSLPG 223
               PG   PP  P LPG
Sbjct: 936 LPGVPGREGPPGFPGLPG 953



 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 56/230 (24%), Positives = 74/230 (32%), Gaps = 53/230 (23%)

Query: 47   PPGPSPSSGALDLLDTPA--------GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHG 98
            PPGP    G    +  P         GL+ + G    A+   G+ G+    P  P    G
Sbjct: 1207 PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGM--PGPPGPPGPPG 1264

Query: 99   PEGTLAWDAG--DQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPH 156
            P GT  +D+    ++  PGP G      PP P        P        P  P       
Sbjct: 1265 PPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGP--------PGPPGQFPFDF 1316

Query: 157  IEEEETTSIATARRGSPGQEEELPQGQP----------QSPNAPPSPS--------VGET 198
            ++ E         RG  GQ+ E  +G+P            P  PP P          GE+
Sbjct: 1317 LQLEAEMKGEKGDRGDAGQKGE--RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGES 1374

Query: 199  L-------------GDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPP 235
            +             G G    Q  PG   PP  PS PG      +   PP
Sbjct: 1375 IRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPP 1424



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 69/252 (27%), Positives = 90/252 (35%), Gaps = 56/252 (22%)

Query: 7   PSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAG 65
           P+P  P+T P  PLAG    +    E++ E  T  + G    PG    S     + TP G
Sbjct: 690 PAP-PPVTTP--PLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGG 746

Query: 66  LEKDPGVLDGATELLGLGGLLYKA--------PSPPEVDH-----GPEGTLAWDAGDQTL 112
             K+ G L G     G+ G   +A        P PP +       GP G           
Sbjct: 747 RVKEGG-LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQG 805

Query: 113 EPGPGGQ--TP--EVVPPDPGAGAN--SCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
            PGP G+  TP  +  P DPG         P+G      P +P  +              
Sbjct: 806 PPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGF-----PGTPGDVGPK----------- 849

Query: 167 TARRGSPGQEEELPQGQPQSPNAPPSPSV-----------GETLG---DGINSSQTKPGG 212
              +G PG  E  P G PQ P  PP PS            G   G   + +   +  PG 
Sbjct: 850 -GDKGDPGVGERGPPG-PQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGP 907

Query: 213 SSPPAHPSLPGD 224
             PP  P LPG+
Sbjct: 908 PGPPGVPGLPGE 919



 Score = 37.0 bits (84), Expect = 0.13
 Identities = 50/197 (25%), Positives = 63/197 (31%), Gaps = 41/197 (20%)

Query: 31   GEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAP 90
            GE  L     P     PPGP    G              PG+  G  ++ G GG  +   
Sbjct: 995  GESGLAGAPGPAGPPGPPGPPGPPG--------------PGLPAGFDDMEGSGGPFWSTA 1040

Query: 91   SPPEVDHGPEGT--LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
               +   GP G   L  D G   L    G    + VP  PG        EG+  P  P  
Sbjct: 1041 RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGR----EGIAGPQGPKG 1096

Query: 149  PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPN--APPSPSVGETLGDGINSS 206
                             +   +G PG++     GQP  P    PP P V  +  DG  S 
Sbjct: 1097 DRG--------------SRGEKGDPGKDGV---GQPGLPGPPGPPGPVVYVSEQDG--SV 1137

Query: 207  QTKPGGSSPPAHPSLPG 223
             + PG    P     PG
Sbjct: 1138 LSVPGPEGRPGFAGFPG 1154



 Score = 34.7 bits (78), Expect = 0.65
 Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 34/185 (18%)

Query: 47   PPGPSPSSGALDLLDTP-AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH--GPEGTL 103
            PPGPS     L  +D   +G   D   L G     G        P PP V    G  G  
Sbjct: 871  PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPG-------PPGPPGVPGLPGEPGRF 923

Query: 104  AWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
              ++ D    PGP G     +P  PG       P G      P  P   + P     +  
Sbjct: 924  GVNSSDV---PGPAG-----LPGVPGREG----PPGFPGLPGPPGPPGREGPPGRTGQKG 971

Query: 164  SIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG 223
            S+  A  G+PG +     G   +P   P+ + GE+   G+  +    G   PP  P  PG
Sbjct: 972  SLGEA--GAPGHK-----GSKGAPG--PAGARGES---GLAGAPGPAGPPGPPGPPGPPG 1019

Query: 224  DGLTA 228
             GL A
Sbjct: 1020 PGLPA 1024


>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1336

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 29/198 (14%)

Query: 48  PGPSPSSGALDLLDTPAG---LEKDPGVLDGATELLGLGGLLYKAPSP--PEVDHGPEGT 102
           PGP   +G       P G   L   PG+    + L   G  L   P P  P    G +GT
Sbjct: 348 PGPPGRAG-------PPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGT 400

Query: 103 LAWDA--GDQTLEPGPGGQTPEVVPPDPG----AGANSCSPEGLLEPLAPDSPITLQSPH 156
              D   GD   +  PG   P+  P  PG     G       G   P  P  P     P 
Sbjct: 401 PGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPS 460

Query: 157 IEEEETTSIATARRGSPGQEEEL--PQGQPQSPNAPPSPSV-GETLGDGINSSQTK---- 209
              ++ T I     G  G  E L  P+G P  P  P  P + GE    G+NSS       
Sbjct: 461 FRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAG 520

Query: 210 ----PGGSSPPAHPSLPG 223
               PG   PP  P LPG
Sbjct: 521 LPGVPGREGPPGFPGLPG 538



 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 56/230 (24%), Positives = 74/230 (32%), Gaps = 53/230 (23%)

Query: 47   PPGPSPSSGALDLLDTPA--------GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHG 98
            PPGP    G    +  P         GL+ + G    A+   G+ G+    P  P    G
Sbjct: 792  PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGM--PGPPGPPGPPG 849

Query: 99   PEGTLAWDAG--DQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPH 156
            P GT  +D+    ++  PGP G      PP P        P        P  P       
Sbjct: 850  PPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGP--------PGPPGQFPFDF 901

Query: 157  IEEEETTSIATARRGSPGQEEELPQGQP----------QSPNAPPSPS--------VGET 198
            ++ E         RG  GQ+ E  +G+P            P  PP P          GE+
Sbjct: 902  LQLEAEMKGEKGDRGDAGQKGE--RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGES 959

Query: 199  L-------------GDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPP 235
            +             G G    Q  PG   PP  PS PG      +   PP
Sbjct: 960  IRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPP 1009



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 69/252 (27%), Positives = 90/252 (35%), Gaps = 56/252 (22%)

Query: 7   PSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAG 65
           P+P  P+T P  PLAG    +    E++ E  T  + G    PG    S     + TP G
Sbjct: 275 PAP-PPVTTP--PLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGG 331

Query: 66  LEKDPGVLDGATELLGLGGLLYKA--------PSPPEVDH-----GPEGTLAWDAGDQTL 112
             K+ G L G     G+ G   +A        P PP +       GP G           
Sbjct: 332 RVKEGG-LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQG 390

Query: 113 EPGPGGQ--TP--EVVPPDPGAGAN--SCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
            PGP G+  TP  +  P DPG         P+G      P +P  +              
Sbjct: 391 PPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGF-----PGTPGDVGPK----------- 434

Query: 167 TARRGSPGQEEELPQGQPQSPNAPPSPSV-----------GETLG---DGINSSQTKPGG 212
              +G PG  E  P G PQ P  PP PS            G   G   + +   +  PG 
Sbjct: 435 -GDKGDPGVGERGPPG-PQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGP 492

Query: 213 SSPPAHPSLPGD 224
             PP  P LPG+
Sbjct: 493 PGPPGVPGLPGE 504



 Score = 37.0 bits (84), Expect = 0.13
 Identities = 50/197 (25%), Positives = 63/197 (31%), Gaps = 41/197 (20%)

Query: 31  GEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAP 90
           GE  L     P     PPGP    G              PG+  G  ++ G GG  +   
Sbjct: 580 GESGLAGAPGPAGPPGPPGPPGPPG--------------PGLPAGFDDMEGSGGPFWSTA 625

Query: 91  SPPEVDHGPEGT--LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
              +   GP G   L  D G   L    G    + VP  PG        EG+  P  P  
Sbjct: 626 RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGR----EGIAGPQGPKG 681

Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPN--APPSPSVGETLGDGINSS 206
                            +   +G PG++     GQP  P    PP P V  +  DG  S 
Sbjct: 682 DRG--------------SRGEKGDPGKDGV---GQPGLPGPPGPPGPVVYVSEQDG--SV 722

Query: 207 QTKPGGSSPPAHPSLPG 223
            + PG    P     PG
Sbjct: 723 LSVPGPEGRPGFAGFPG 739



 Score = 34.7 bits (78), Expect = 0.65
 Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 34/185 (18%)

Query: 47  PPGPSPSSGALDLLDTP-AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH--GPEGTL 103
           PPGPS     L  +D   +G   D   L G     G        P PP V    G  G  
Sbjct: 456 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPG-------PPGPPGVPGLPGEPGRF 508

Query: 104 AWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
             ++ D    PGP G     +P  PG       P G      P  P   + P     +  
Sbjct: 509 GVNSSDV---PGPAG-----LPGVPGREG----PPGFPGLPGPPGPPGREGPPGRTGQKG 556

Query: 164 SIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG 223
           S+  A  G+PG +     G   +P   P+ + GE+   G+  +    G   PP  P  PG
Sbjct: 557 SLGEA--GAPGHK-----GSKGAPG--PAGARGES---GLAGAPGPAGPPGPPGPPGPPG 604

Query: 224 DGLTA 228
            GL A
Sbjct: 605 PGLPA 609


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1516

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 59/198 (29%), Positives = 70/198 (35%), Gaps = 29/198 (14%)

Query: 48  PGPSPSSGALDLLDTPAG---LEKDPGVLDGATELLGLGGLLYKAPSP--PEVDHGPEGT 102
           PGP   +G       P G   L   PG+    + L   G  L   P P  P    G +GT
Sbjct: 528 PGPPGRAG-------PPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGT 580

Query: 103 LAWDA--GDQTLEPGPGGQTPEVVPPDPG----AGANSCSPEGLLEPLAPDSPITLQSPH 156
              D   GD   +  PG   P+  P  PG     G       G   P  P  P     P 
Sbjct: 581 PGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPS 640

Query: 157 IEEEETTSIATARRGSPGQEEEL--PQGQPQSPNAPPSPSV-GETLGDGINSSQTK---- 209
              ++ T I     G  G  E L  P+G P  P  P  P + GE    G+NSS       
Sbjct: 641 FRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAG 700

Query: 210 ----PGGSSPPAHPSLPG 223
               PG   PP  P LPG
Sbjct: 701 LPGVPGREGPPGFPGLPG 718



 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 56/230 (24%), Positives = 74/230 (32%), Gaps = 53/230 (23%)

Query: 47   PPGPSPSSGALDLLDTPA--------GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHG 98
            PPGP    G    +  P         GL+ + G    A+   G+ G+    P  P    G
Sbjct: 972  PPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGM--PGPPGPPGPPG 1029

Query: 99   PEGTLAWDAG--DQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPH 156
            P GT  +D+    ++  PGP G      PP P        P        P  P       
Sbjct: 1030 PPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGP--------PGPPGQFPFDF 1081

Query: 157  IEEEETTSIATARRGSPGQEEELPQGQP----------QSPNAPPSPS--------VGET 198
            ++ E         RG  GQ+ E  +G+P            P  PP P          GE+
Sbjct: 1082 LQLEAEMKGEKGDRGDAGQKGE--RGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGES 1139

Query: 199  L-------------GDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPP 235
            +             G G    Q  PG   PP  PS PG      +   PP
Sbjct: 1140 IRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPP 1189



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 69/252 (27%), Positives = 90/252 (35%), Gaps = 56/252 (22%)

Query: 7   PSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAP-PGPSPSSGALDLLDTPAG 65
           P+P  P+T P  PLAG    +    E++ E  T  + G    PG    S     + TP G
Sbjct: 455 PAP-PPVTTP--PLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGG 511

Query: 66  LEKDPGVLDGATELLGLGGLLYKA--------PSPPEVDH-----GPEGTLAWDAGDQTL 112
             K+ G L G     G+ G   +A        P PP +       GP G           
Sbjct: 512 RVKEGG-LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQG 570

Query: 113 EPGPGGQ--TP--EVVPPDPGAGAN--SCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
            PGP G+  TP  +  P DPG         P+G      P +P  +              
Sbjct: 571 PPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGF-----PGTPGDVGPK----------- 614

Query: 167 TARRGSPGQEEELPQGQPQSPNAPPSPSV-----------GETLG---DGINSSQTKPGG 212
              +G PG  E  P G PQ P  PP PS            G   G   + +   +  PG 
Sbjct: 615 -GDKGDPGVGERGPPG-PQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGP 672

Query: 213 SSPPAHPSLPGD 224
             PP  P LPG+
Sbjct: 673 PGPPGVPGLPGE 684



 Score = 37.0 bits (84), Expect = 0.13
 Identities = 50/197 (25%), Positives = 63/197 (31%), Gaps = 41/197 (20%)

Query: 31  GEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAP 90
           GE  L     P     PPGP    G              PG+  G  ++ G GG  +   
Sbjct: 760 GESGLAGAPGPAGPPGPPGPPGPPG--------------PGLPAGFDDMEGSGGPFWSTA 805

Query: 91  SPPEVDHGPEGT--LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDS 148
              +   GP G   L  D G   L    G    + VP  PG        EG+  P  P  
Sbjct: 806 RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGR----EGIAGPQGPKG 861

Query: 149 PITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPN--APPSPSVGETLGDGINSS 206
                            +   +G PG++     GQP  P    PP P V  +  DG  S 
Sbjct: 862 DRG--------------SRGEKGDPGKDGV---GQPGLPGPPGPPGPVVYVSEQDG--SV 902

Query: 207 QTKPGGSSPPAHPSLPG 223
            + PG    P     PG
Sbjct: 903 LSVPGPEGRPGFAGFPG 919



 Score = 34.7 bits (78), Expect = 0.65
 Identities = 51/185 (27%), Positives = 67/185 (36%), Gaps = 34/185 (18%)

Query: 47  PPGPSPSSGALDLLDTP-AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH--GPEGTL 103
           PPGPS     L  +D   +G   D   L G     G        P PP V    G  G  
Sbjct: 636 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPG-------PPGPPGVPGLPGEPGRF 688

Query: 104 AWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
             ++ D    PGP G     +P  PG       P G      P  P   + P     +  
Sbjct: 689 GVNSSDV---PGPAG-----LPGVPGREG----PPGFPGLPGPPGPPGREGPPGRTGQKG 736

Query: 164 SIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG 223
           S+  A  G+PG +     G   +P   P+ + GE+   G+  +    G   PP  P  PG
Sbjct: 737 SLGEA--GAPGHK-----GSKGAPG--PAGARGES---GLAGAPGPAGPPGPPGPPGPPG 784

Query: 224 DGLTA 228
            GL A
Sbjct: 785 PGLPA 789


>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
          Length = 873

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 29/173 (16%)

Query: 409 CSICQKTGEVLHEVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPE 468
           C+ CQK G   + +S GS V   CS+ CF+  R     +    D+ G             
Sbjct: 151 CAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFKRNKARDEDGHA----------- 199

Query: 469 LLFHEGQQKRFCNTTCLGAYKKKNTRVYPCVWCKTLCKNFEMLSHVDRNGKTSLFCSLCC 528
                  Q+ +   T   A+K  N  +  C WCK +    E L   D   +   FCS  C
Sbjct: 200 ---ENFPQQHYAKETPRLAFKN-NCELLVCDWCKHIRHTKEYLDFGDGERRLQ-FCSAKC 254

Query: 529 TTSYKV------KQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCW 575
              YK+       QA L     P   C  S   P   NK + T  Q  +P  W
Sbjct: 255 LNQYKMDIFYKETQANL-----PAGLC--STLHPPMENKAEGTGVQLLTPDSW 300



 Score = 40.8 bits (94), Expect = 0.009
 Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 21/144 (14%)

Query: 766 PESLLNSQSPESKPQTPS----QTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPP- 820
           P    N  SP S P  P          N     +P     L    +   S PT P  PP 
Sbjct: 416 PHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSP-HIHPPSTPTMPGNPPG 474

Query: 821 ---PPPPATPRKN----------KAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVL 867
              PPPP  P  +             M  P M N G+     +    +    + P ++ L
Sbjct: 475 LLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPY-PVIVPL 533

Query: 868 PIPVPIFVPVPMHLYCQKVPVPFS 891
           P+P+PI +P+P H+   K P  FS
Sbjct: 534 PVPIPIPIPIP-HVSDSKPPNGFS 556



 Score = 33.9 bits (76), Expect = 1.1
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 799 NGNLGKIPVKTRSAPTAPT-PPPPPPPATPRK 829
           NG  G      +SA   P  PPPPPPPA P+K
Sbjct: 725 NGTRGAAAEGAKSAEPPPEQPPPPPPPAPPKK 756



 Score = 32.7 bits (73), Expect = 2.5
 Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 59/289 (20%)

Query: 633 CEHCRQEKLLHEKLRFSGVEKSFCSEGCVLLYKQDFTKKLGLCCITCTYCSQTCQRGVTE 692
           C  C++  +    L      KSFCSE C    ++ + K                 R    
Sbjct: 151 CAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFK-----------------RNKAR 193

Query: 693 QLDGSTWDFCSED-CKSKYLLWY---CKAARCHACKRQGKLLETIHWRGQIR--HFCNQQ 746
             DG   +F  +   K    L +   C+   C  CK      E + +    R   FC+ +
Sbjct: 194 DEDGHAENFPQQHYAKETPRLAFKNNCELLVCDWCKHIRHTKEYLDFGDGERRLQFCSAK 253

Query: 747 CLLRF----YSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNL 802
           CL ++    + ++ Q NL     P  L ++  P      P + K E +       ++ N 
Sbjct: 254 CLNQYKMDIFYKETQANL-----PAGLCSTLHP------PMENKAEGTGVQLLTPDSWN- 301

Query: 803 GKIPVKTRSAPTAPTP---------PPPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSK 853
             IP+ T +   AP+P         P P    T   +  A C        +   V     
Sbjct: 302 --IPL-TDARRKAPSPVATAGQSQGPGPSASTTVSPSDTANCSVTK----IPTPVPKSIP 354

Query: 854 GSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPIPVPVPMFL 902
            S+T    P +  + +  P  +  P+ +  +  P+  +   PVP+P+F+
Sbjct: 355 ISET----PNIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGPVPLPIFM 399


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 66/239 (27%), Positives = 82/239 (34%), Gaps = 27/239 (11%)

Query: 8    SPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLE 67
            +P  P      P  G     ++ G     + T P+    P  PSP    +    TP    
Sbjct: 1056 APTTPAATLPSPKGGPATPSLK-GAPTPPAATPPSPKGGPATPSPKGAPMPPAATP---- 1110

Query: 68   KDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPD 127
              P    G       G     A +PP     P+G LA      T  P     TP   PP 
Sbjct: 1111 --PSPKGGLATPPHKGAPTTPAATPPS----PKGGLA------TPPPKGAPTTPAATPPS 1158

Query: 128  PGAGANSCSPEGL-LEPLA-PDSPIT-LQSPHIEEEETTSIATARRGSPGQEEELPQGQP 184
            P  G  +  P+G    P A P SP   L +P  +   TT  AT      G     P+G P
Sbjct: 1159 PKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1218

Query: 185  QSPNA-PPSPSVG----ETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERK 238
             +P A PPSP  G       G     + T P     PA P  P  G     +  PP  K
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP--PPKGAPTPPAATPPSLK 1275



 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 69/270 (25%), Positives = 92/270 (34%), Gaps = 40/270 (14%)

Query: 3    PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDT 62
            PS    PF P   P  P     P          +++  P     P  PSP         T
Sbjct: 888  PSVVNLPF-PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT 946

Query: 63   PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH-GPEGTLAWDAGDQTLEPGPGGQTP 121
            P   +  P                  AP+PP      P+G      G  T  P      P
Sbjct: 947  PPSPKGGPATPSPKW-----------APTPPAATPPSPKG------GPATPSPKGAPTPP 989

Query: 122  EVVPPDPGAGANSCSPEGLLEP--LAPDSP--ITLQSPHIEEEETTSIAT--ARRGSPGQ 175
               PP P  G  + SP+G   P  + P SP      +P  +   T   AT  + +GSP  
Sbjct: 990  AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA- 1048

Query: 176  EEELPQGQPQSPNAP-PSPSVGETLGDGINSSQTKPGGSSP-----PAHPSLPGDGLTAK 229
               LP+G P +P A  PSP  G      +  + T P  + P     PA PS  G  +   
Sbjct: 1049 ATPLPKGAPTTPAATLPSPKGGPAT-PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107

Query: 230  ASEKPPE-------RKRSERVRRAEPPKPE 252
            A+   P+        K +     A PP P+
Sbjct: 1108 ATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137



 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 96/396 (24%), Positives = 126/396 (31%), Gaps = 82/396 (20%)

Query: 3    PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDT 62
            PS   +P  P   P  P  G L      G     + T P+    P  P P         T
Sbjct: 1212 PSPKGAPTTPAATPPSPKGG-LATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT 1270

Query: 63   PAGLEKDPGVLDGATELLGLGGLLYK-APSPPEVDH-GPEGTLAWDAGDQTLEPGPGGQT 120
            P  L+             GL    +K AP+P  V    P+G      G  T  P      
Sbjct: 1271 PPSLKG------------GLATPPHKGAPNPAVVTPPSPKG------GPATSPPKGAPTP 1312

Query: 121  PEVVPPDPGAGANSCSPEGLLEPLA---------PDSPITLQS-------PHIEEEETTS 164
            P   PP P     +  P+G   P A         P  P T  S       P  +E  T  
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372

Query: 165  IAT-ARRGSP---------GQEEELPQGQPQSPNAPP-----------------SPSVGE 197
             AT + +G P         G     P+G P SP   P                 +PS G+
Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432

Query: 198  TLGDGIN--SSQTKPGGSSP---PAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
                 +   S +  P  S+P   PA PS  GD      +  PP  K        EPP P+
Sbjct: 1433 LTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT--PPSPK--------EPPAPK 1482

Query: 253  VVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRSPR--MSLRSSVSQRAGRSAVGTKMT 310
             V +T S P     + A +  P     +P  P+  P    S R  ++  A   +  T  T
Sbjct: 1483 QV-ATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPAT 1541

Query: 311  CAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKK 346
             A     +    T    K  P +        T S K
Sbjct: 1542 LAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSK 1577



 Score = 38.9 bits (89), Expect = 0.034
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 762  TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENG---NLGKIPVKTRSAPTAPTP 818
            T   P+  L + SP+  P TP+ T       + TP   G        P   +  P  P P
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP 1260

Query: 819  P--PPPPPATPRKNKAAMCKP 837
               P PP ATP   K  +  P
Sbjct: 1261 KGAPTPPAATPPSLKGGLATP 1281



 Score = 38.1 bits (87), Expect = 0.058
 Identities = 41/167 (24%), Positives = 50/167 (29%), Gaps = 36/167 (21%)

Query: 762  TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPP-- 819
            T S P+    + +P+  P +PS            P   G       K    P A TPP  
Sbjct: 914  TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973

Query: 820  ------------PPPPPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVL 867
                        P PP ATP   K     P               KG+ T    P  +  
Sbjct: 974  KGGPATPSPKGAPTPPAATPPSPKGGPATP-------------SPKGAPT----PPAVTP 1016

Query: 868  PIP--VPIFVPVPMHLYCQKV---PVPFSMPIPVPVPMFLPTTLEST 909
            P P   P   P P           P P   P   P+P   PTT  +T
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAAT 1063



 Score = 37.7 bits (86), Expect = 0.076
 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 14/125 (11%)

Query: 775  PESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAM 834
            PESK  TP          V    E+ ++   P    S P AP+P P  PP          
Sbjct: 1765 PESKASTPLTAAAFEK--VLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQ-------- 1814

Query: 835  CKPLMQNRGVSCKVEMKSKGSQTEEWKPQVIVLPIPVPIFVPVPMHLYCQKVPVPFSMPI 894
             + L  + G+  +   K      E+   +++ L  P PI   VP       +P P S  I
Sbjct: 1815 -QFLPSSPGLVLESPSKPLAPADED---ELLPLIPPEPISGGVPFQSVLVNMPTPKSAGI 1870

Query: 895  PVPVP 899
            PVP P
Sbjct: 1871 PVPTP 1875



 Score = 34.7 bits (78), Expect = 0.65
 Identities = 45/182 (24%), Positives = 57/182 (31%), Gaps = 28/182 (15%)

Query: 114  PGPGGQT--PEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRG 171
            P P G    P   PP P  G  + SP+    P A   P    SP              +G
Sbjct: 934  PSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP----SP--------------KG 975

Query: 172  SPGQEEELPQGQPQSPNA-PPSPSVGETL----GDGINSSQTKPGGSSPPAHPSLPGDGL 226
             P      P+G P  P A PPSP  G       G     + T P     PA    P  G 
Sbjct: 976  GPATPS--PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFP-KGA 1032

Query: 227  TAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRR 286
            +   +  PP  K S          P    +T   P     + ++   P      P  P+ 
Sbjct: 1033 STPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG 1092

Query: 287  SP 288
             P
Sbjct: 1093 GP 1094



 Score = 34.7 bits (78), Expect = 0.65
 Identities = 79/335 (23%), Positives = 111/335 (33%), Gaps = 63/335 (18%)

Query: 3    PSDFPSPFDPLTLPEKPLAGDLPVDMEFGED-------LLESQT----APTRGWAPPGPS 51
            P+   +P  P  +P  P   ++P       D       LL  +T    AP     PP  +
Sbjct: 1497 PAPMGAPTLPAVIPSSPK--EVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMT 1554

Query: 52   -PSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQ 110
             PS      + TP      P   + ++           APSP E+   P  T        
Sbjct: 1555 VPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVT-------- 1606

Query: 111  TLEPGPGGQTPEVVPPDPGAGANSCSPEG--LLEPLAP----DSPITLQSPHIEEEETTS 164
            +  P      P V PP P  G  + +P+G     P+ P    DSP +  S   +   T  
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666

Query: 165  IAT----ARRGSPGQEEELPQGQPQSP--------NAPPSPSVGETLGDGINSSQTKPGG 212
             A+    A++G    +E L    P+S           P +     T          K G 
Sbjct: 1667 QASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGS 1726

Query: 213  SSP-------PAHPSLPGDGLTAKASE---------KPPERKRSERVRRAE----PPKPE 252
              P       P  P       TAK  +          PPE K S  +  A      PKPE
Sbjct: 1727 KGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPE 1786

Query: 253  --VVDSTESIPVSDEDSDAMVDD-PNDEDFVPFRP 284
               V +  S PVS   + + V   P  + F+P  P
Sbjct: 1787 SASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSP 1821



 Score = 34.3 bits (77), Expect = 0.84
 Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 15/81 (18%)

Query: 762  TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENG------------NLGKIPVKT 809
            T   P+  L + SP+  P TP+ T       + TP   G              G      
Sbjct: 1178 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1237

Query: 810  RSAPTAPTPPPPPP---PATP 827
            + APT P   PP P   PATP
Sbjct: 1238 KGAPTTPAATPPSPKGGPATP 1258



 Score = 32.7 bits (73), Expect = 2.5
 Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 14/78 (17%)

Query: 774  SPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPP--------PPP--- 822
            SP+  P TPS            P   G L   P K      A TPP        PPP   
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGA 1148

Query: 823  ---PPATPRKNKAAMCKP 837
               P ATP   K  +  P
Sbjct: 1149 PTTPAATPPSPKGGLATP 1166



 Score = 32.3 bits (72), Expect = 3.2
 Identities = 61/244 (25%), Positives = 81/244 (33%), Gaps = 32/244 (13%)

Query: 4   SDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPP---GPSPSSGALDLL 60
           S FPSP    T+   PL  ++P         L   TAP      P   GP  S  AL L 
Sbjct: 65  SPFPSPS---TIASTPL--EVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALA 119

Query: 61  D-----TPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPG 115
                 T  G       L  A   L    +   +  PP +   P      ++G       
Sbjct: 120 SPMIAPTLKGTPSSSAPL--ALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSA 177

Query: 116 PGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQ 175
           P      + P +P    N    E +  P    SP  + S  +     T +A+ + G    
Sbjct: 178 P------IAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVST-VPYHCVTPMASIQSGVAS- 229

Query: 176 EEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGG------SSPPAHPSLPGDGLTAK 229
              LPQ  P +  A  SP V +T    +  S   PG        SPPA  SL    L   
Sbjct: 230 ---LPQTTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVV 286

Query: 230 ASEK 233
            S +
Sbjct: 287 TSSQ 290



 Score = 32.0 bits (71), Expect = 4.2
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 9/75 (12%)

Query: 758  PNLDTQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAP- 816
            P   T   P+    + SP+  P  P+ T       + TP   G     P    + P +P 
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG----APTTPAATPPSPK 1137

Query: 817  ----TPPPPPPPATP 827
                TPPP   P TP
Sbjct: 1138 GGLATPPPKGAPTTP 1152



 Score = 31.2 bits (69), Expect = 7.1
 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 7/82 (8%)

Query: 762  TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAP------TA 815
            T   P+  L +  P+  P TP+ T       + TP   G     P  T  +P       +
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKG-APTTPAATPPSPKGGLATPS 1213

Query: 816  PTPPPPPPPATPRKNKAAMCKP 837
            P   P  P ATP   K  +  P
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATP 1235



 Score = 31.2 bits (69), Expect = 7.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 768  SLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATP 827
            +++   SP+  P T              P   G+ G  P K   APT P   PP P  TP
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK--GAPTPPAVTPPSPKGTP 1347



 Score = 30.8 bits (68), Expect = 9.3
 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 14/69 (20%)

Query: 762  TQSGPESLLNSQSPESKPQTPSQTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPP 821
            T   P+  L +  P+  P TP+ T          P   G L   P K   APT P   PP
Sbjct: 1132 TPPSPKGGLATPPPKGAPTTPAAT---------PPSPKGGLATPPPK--GAPTTPAATPP 1180

Query: 822  PPP---ATP 827
             P    ATP
Sbjct: 1181 SPKGGLATP 1189


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 57/219 (26%), Positives = 72/219 (32%), Gaps = 22/219 (10%)

Query: 36  ESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV 95
           +SQ  P R   P GP P  G     +   G    PG  +G     G      ++  PP  
Sbjct: 109 QSQGPPPRPGKPEGPPPQGG-----NQSQGPPPRPGKPEGPPPQGG-----NQSQGPPPR 158

Query: 96  DHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPE-GLLEPLAPDSPITLQS 154
              PEG      G+Q+  P P    PE  PP  G  +    P  G  E   P      Q 
Sbjct: 159 PGKPEGPPP-QGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 217

Query: 155 PHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSS 214
           P     +         G P Q    PQG P  P  P  P   E           +P G  
Sbjct: 218 PPPRPGKP-------EGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPP 270

Query: 215 PPA---HPSLPGDGLTAKASEKPPERKRSERVRRAEPPK 250
           PP       LP      +    PP+  R  R  + +PP+
Sbjct: 271 PPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 59/228 (25%), Positives = 78/228 (34%), Gaps = 38/228 (16%)

Query: 36  ESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV 95
           +SQ  P R   P GP P  G     +   G    PG  +G     G      ++  PP  
Sbjct: 67  QSQGPPPRPGKPEGPPPQGG-----NQSQGPPPRPGKPEGQPPQGG-----NQSQGPPPR 116

Query: 96  DHGPEGTLAWDAGDQTLEPGP-----------GGQTPEVVPPDPGAGANSCSPEGLLEPL 144
              PEG      G+Q+  P P           GG   +  PP PG         G     
Sbjct: 117 PGKPEGPPP-QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 175

Query: 145 APDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGIN 204
            P  P   + P  +    +     R G P  E   PQG  QS   PP P   E      +
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKP--EGPPPQGGNQSQGPPPRPGKPE---GPPS 230

Query: 205 SSQTKPGGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPE 252
               KP G  PP HP  P         + PP ++ ++  R   P +P+
Sbjct: 231 QGGNKPQG--PPPHPGKP---------QGPPPQEGNKPQRPPPPGRPQ 267



 Score = 39.3 bits (90), Expect = 0.026
 Identities = 41/149 (27%), Positives = 49/149 (32%), Gaps = 20/149 (13%)

Query: 117 GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQE 176
           GG  P+  PP PG         G      P  P   + P  +    +     R G P  E
Sbjct: 43  GGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP--E 100

Query: 177 EELPQGQPQSPNAPPSPSVGE-TLGDGINSSQTKP------------GGSSPPAHPSLPG 223
            + PQG  QS   PP P   E     G N SQ  P            GG+     P  PG
Sbjct: 101 GQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 160

Query: 224 DGLTAKASEKPPERKRSERVRRAEPPKPE 252
                K    PP+     +     P KPE
Sbjct: 161 -----KPEGPPPQGGNQSQGPPPHPGKPE 184


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 49/183 (26%), Positives = 64/183 (34%), Gaps = 19/183 (10%)

Query: 49  GPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV-DHGPEGTLAWDA 107
           GP  +SG       P G +  PG L G     G  G+        +V + GPEG    D 
Sbjct: 729 GPKGASGPAG----PPGAQGPPG-LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG 783

Query: 108 GDQTLEP-------GPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE 160
           G     P       G  G+  EV PP P   A +    G      P  P     P   + 
Sbjct: 784 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 843

Query: 161 ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS 220
           +    A   +G  GQ+ +     PQ P+  P P  G T   G+   +   G   PP    
Sbjct: 844 QPG--AKGEQGEAGQKGDAGAPGPQGPSGAPGPQ-GPT---GVTGPKGARGAQGPPGATG 897

Query: 221 LPG 223
            PG
Sbjct: 898 FPG 900



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 55/205 (26%), Positives = 67/205 (32%), Gaps = 31/205 (15%)

Query: 44  GWAPPGPSPSSGALDLLDTPAGLEKDPGV-----LDGATELLGLGGLLYKAPSPPEVDHG 98
           G A P  +P       L  P G   DPG      L GA  L G  G           D G
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG-----------DAG 570

Query: 99  PEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE 158
           P+G +           G  G+     PP P          G   P   +       P   
Sbjct: 571 PQGKVG--------PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG-----EPGKA 617

Query: 159 EEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAH 218
            E+    A   RG PG++ E     P  P A P+   GE    G +  Q  PG   PP  
Sbjct: 618 GEKGLPGAPGLRGLPGKDGETGAAGPPGP-AGPAGERGEQGAPGPSGFQGLPGPPGPPGE 676

Query: 219 PSLPGD-GLTAKASEKPPERKRSER 242
              PGD G+  +A        R ER
Sbjct: 677 GGKPGDQGVPGEAGAPGLVGPRGER 701



 Score = 41.6 bits (96), Expect = 0.005
 Identities = 53/188 (28%), Positives = 70/188 (37%), Gaps = 32/188 (17%)

Query: 47  PPGPSPSSGALDLLDTPA--GLEKDPGV-----LDGATELLGLGGLLYK--APSPPEVDH 97
           PPGP  + G   ++  P   G   +PG      L GA  L GL G   +  A  PP    
Sbjct: 589 PPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPP---- 644

Query: 98  GPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHI 157
           GP G  A + G+Q   PGP G      PP P         +G+        P    +P +
Sbjct: 645 GPAGP-AGERGEQGA-PGPSGFQGLPGPPGPPGEGGKPGDQGV--------PGEAGAPGL 694

Query: 158 EEEETTSIATARRGSPG-QEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPP 216
                       RGSPG Q  + P+G P +P        G     G +     PG   PP
Sbjct: 695 VGPRGERGFPGERGSPGAQGLQGPRGLPGTP--------GTDGPKGASGPAGPPGAQGPP 746

Query: 217 AHPSLPGD 224
               +PG+
Sbjct: 747 GLQGMPGE 754



 Score = 38.1 bits (87), Expect = 0.058
 Identities = 50/202 (24%), Positives = 62/202 (30%), Gaps = 59/202 (29%)

Query: 63  PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTL--------EP 114
           P G + +PG +       G  G     P  P  + GP G    D G++          EP
Sbjct: 102 PKGQKGEPGDIKDIVGPKGPPG-----PQGPAGEQGPRGDRG-DKGEKGAPGPRGRDGEP 155

Query: 115 G----PGGQTPEVVPPDPGAGANSCS--------------------PEGLLEPLAPDSPI 150
           G    PG   P   P  PG G N  +                    P G + P  P  P 
Sbjct: 156 GTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPA 215

Query: 151 TLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKP 210
               P              +G+PG+  E     P  P  PP P  G+   DG      K 
Sbjct: 216 GAPGPQ-----------GFQGNPGEPGEPGVSGPMGPRGPPGPP-GKPGDDGEAGKPGKA 263

Query: 211 GGSSP---------PAHPSLPG 223
           G   P         P  P LPG
Sbjct: 264 GERGPPGPQGARGFPGTPGLPG 285



 Score = 36.2 bits (82), Expect = 0.22
 Identities = 63/267 (23%), Positives = 82/267 (30%), Gaps = 48/267 (17%)

Query: 7   PSPFDPLTLPEKP-LAGDLPVDMEFGED---------LLESQTAPTRGWAPPGPSPSSGA 56
           P P  P   P  P L G+    M  G D         +++    P     PPGP+ + G 
Sbjct: 161 PGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGP 220

Query: 57  LDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGP 116
                 P G   +PGV                 P  P    GP G    D      E G 
Sbjct: 221 QGFQGNP-GEPGEPGV---------------SGPMGPRGPPGPPGKPGDDG-----EAGK 259

Query: 117 GGQTPEVVPPDPGAGANSCSPEGLLE-------PLAPDSPITLQSPHIEEEETTSIATAR 169
            G+  E  PP P          GL         P    +     +P ++ E   S +   
Sbjct: 260 PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGE 316

Query: 170 RGSPGQEEELPQGQP-QSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG----D 224
            GSPG     P+G P +     P+ + G    DG       PG   P   P  PG     
Sbjct: 317 NGSPGPMG--PRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAK 374

Query: 225 GLTAKASEKPPERKRSERVRRAEPPKP 251
           G       + PE  +  R     P  P
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSP 401



 Score = 36.2 bits (82), Expect = 0.22
 Identities = 55/222 (24%), Positives = 66/222 (29%), Gaps = 55/222 (24%)

Query: 47   PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
            PPGP    G       P G E  PG  DG     G  G+        + D G  G +   
Sbjct: 1018 PPGPVGPPGLTGPAGEP-GREGSPGA-DGPPGRDGAAGV--------KGDRGETGAVGAP 1067

Query: 107  AGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
                   PGP G      P            +G + P  P     +Q P     +     
Sbjct: 1068 GA-----PGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG 1122

Query: 167  -------------TARRGSPG-------QEEELPQGQPQSPNAPPSPSVGETLGDGIN-- 204
                         T  +G PG       Q    P G P  P  PP P VG +  DG N  
Sbjct: 1123 EPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAG-PSGPRGPPGP-VGPSGKDGANGI 1180

Query: 205  ------------SSQT----KPGGSSPPAHPSLPGDGLTAKA 230
                        S +T     PG   PP  P  PG G+   A
Sbjct: 1181 PGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSA 1222



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 50/206 (24%), Positives = 59/206 (28%), Gaps = 32/206 (15%)

Query: 47   PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
            PPGP+  +G       P G +  PG      E    G      P  P    GP+G     
Sbjct: 829  PPGPAGFAG-------PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP---- 877

Query: 107  AGDQTLEPGPGGQTPEVVPPDPGAGANSCSP--EGLLEPLAPDSPITLQSPHIEEEETTS 164
             G    +   G Q P      PGA      P   G   P  P  P     P     ++  
Sbjct: 878  TGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP 937

Query: 165  IATARR-------GSPGQEEELPQGQPQSPNAPPSPS--------VGETLGDGINSSQTK 209
               A         G PG++ E     P     PP P         VG     G       
Sbjct: 938  PGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL 997

Query: 210  PGGSSPPAHPSLPGDGLTAKASEKPP 235
            PG S  P     PG    A     PP
Sbjct: 998  PGPSGEPGKQGAPG----ASGDRGPP 1019



 Score = 31.6 bits (70), Expect = 5.5
 Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 35/113 (30%)

Query: 113 EPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGS 172
           +PGP GQ  E     PG   +   P+G   P  P  P   Q P  +  +        +G+
Sbjct: 99  QPGPKGQKGE-----PGDIKDIVGPKG---PPGPQGPAGEQGPRGDRGDK-----GEKGA 145

Query: 173 PGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDG 225
           PG     P+G+   P  P +P                 G   PP  P  PG G
Sbjct: 146 PG-----PRGRDGEPGTPGNP-----------------GPPGPPGPPGPPGLG 176



 Score = 31.6 bits (70), Expect = 5.5
 Identities = 47/181 (25%), Positives = 59/181 (32%), Gaps = 32/181 (17%)

Query: 47  PPGPSPSSGALDL--------------LDTPAGLEKDPGVLDGATELLGLGGLLYKAPSP 92
           PPGP+ S+GA                    P G +  PG      E    G      P  
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867

Query: 93  PEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITL 152
           P    GP+G      G    +   G Q P      PGA A    P G      P  P   
Sbjct: 868 PSGAPGPQG----PTGVTGPKGARGAQGPPGATGFPGA-AGRVGPPGSNGNPGPPGP--- 919

Query: 153 QSPHIEEEETTSIATARRGSPGQEEELPQGQP--QSPNAPPSPSVGETLGDGINSSQTKP 210
             P    ++    A    G PG+      G+P  Q P  PP    GE   DG + ++  P
Sbjct: 920 --PGPSGKDGPKGARGDSGPPGR-----AGEPGLQGPAGPPGEK-GEPGDDGPSGAEGPP 971

Query: 211 G 211
           G
Sbjct: 972 G 972


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 49/183 (26%), Positives = 64/183 (34%), Gaps = 19/183 (10%)

Query: 49  GPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEV-DHGPEGTLAWDA 107
           GP  +SG       P G +  PG L G     G  G+        +V + GPEG    D 
Sbjct: 660 GPKGASGPAG----PPGAQGPPG-LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG 714

Query: 108 GDQTLEP-------GPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEE 160
           G     P       G  G+  EV PP P   A +    G      P  P     P   + 
Sbjct: 715 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774

Query: 161 ETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPS 220
           +    A   +G  GQ+ +     PQ P+  P P  G T   G+   +   G   PP    
Sbjct: 775 QPG--AKGEQGEAGQKGDAGAPGPQGPSGAPGPQ-GPT---GVTGPKGARGAQGPPGATG 828

Query: 221 LPG 223
            PG
Sbjct: 829 FPG 831



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 55/205 (26%), Positives = 67/205 (32%), Gaps = 31/205 (15%)

Query: 44  GWAPPGPSPSSGALDLLDTPAGLEKDPGV-----LDGATELLGLGGLLYKAPSPPEVDHG 98
           G A P  +P       L  P G   DPG      L GA  L G  G           D G
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPG-----------DAG 501

Query: 99  PEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE 158
           P+G +           G  G+     PP P          G   P   +       P   
Sbjct: 502 PQGKVG--------PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG-----EPGKA 548

Query: 159 EEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAH 218
            E+    A   RG PG++ E     P  P A P+   GE    G +  Q  PG   PP  
Sbjct: 549 GEKGLPGAPGLRGLPGKDGETGAAGPPGP-AGPAGERGEQGAPGPSGFQGLPGPPGPPGE 607

Query: 219 PSLPGD-GLTAKASEKPPERKRSER 242
              PGD G+  +A        R ER
Sbjct: 608 GGKPGDQGVPGEAGAPGLVGPRGER 632



 Score = 41.6 bits (96), Expect = 0.005
 Identities = 53/188 (28%), Positives = 70/188 (37%), Gaps = 32/188 (17%)

Query: 47  PPGPSPSSGALDLLDTPA--GLEKDPGV-----LDGATELLGLGGLLYK--APSPPEVDH 97
           PPGP  + G   ++  P   G   +PG      L GA  L GL G   +  A  PP    
Sbjct: 520 PPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPP---- 575

Query: 98  GPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHI 157
           GP G  A + G+Q   PGP G      PP P         +G+        P    +P +
Sbjct: 576 GPAGP-AGERGEQGA-PGPSGFQGLPGPPGPPGEGGKPGDQGV--------PGEAGAPGL 625

Query: 158 EEEETTSIATARRGSPG-QEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPP 216
                       RGSPG Q  + P+G P +P        G     G +     PG   PP
Sbjct: 626 VGPRGERGFPGERGSPGAQGLQGPRGLPGTP--------GTDGPKGASGPAGPPGAQGPP 677

Query: 217 AHPSLPGD 224
               +PG+
Sbjct: 678 GLQGMPGE 685



 Score = 38.1 bits (87), Expect = 0.058
 Identities = 50/202 (24%), Positives = 62/202 (30%), Gaps = 59/202 (29%)

Query: 63  PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTL--------EP 114
           P G + +PG +       G  G     P  P  + GP G    D G++          EP
Sbjct: 33  PKGQKGEPGDIKDIVGPKGPPG-----PQGPAGEQGPRGDRG-DKGEKGAPGPRGRDGEP 86

Query: 115 G----PGGQTPEVVPPDPGAGANSCS--------------------PEGLLEPLAPDSPI 150
           G    PG   P   P  PG G N  +                    P G + P  P  P 
Sbjct: 87  GTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPA 146

Query: 151 TLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKP 210
               P              +G+PG+  E     P  P  PP P  G+   DG      K 
Sbjct: 147 GAPGPQ-----------GFQGNPGEPGEPGVSGPMGPRGPPGPP-GKPGDDGEAGKPGKA 194

Query: 211 GGSSP---------PAHPSLPG 223
           G   P         P  P LPG
Sbjct: 195 GERGPPGPQGARGFPGTPGLPG 216



 Score = 36.2 bits (82), Expect = 0.22
 Identities = 63/267 (23%), Positives = 82/267 (30%), Gaps = 48/267 (17%)

Query: 7   PSPFDPLTLPEKP-LAGDLPVDMEFGED---------LLESQTAPTRGWAPPGPSPSSGA 56
           P P  P   P  P L G+    M  G D         +++    P     PPGP+ + G 
Sbjct: 92  PGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGP 151

Query: 57  LDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGP 116
                 P G   +PGV                 P  P    GP G    D      E G 
Sbjct: 152 QGFQGNP-GEPGEPGV---------------SGPMGPRGPPGPPGKPGDDG-----EAGK 190

Query: 117 GGQTPEVVPPDPGAGANSCSPEGLLE-------PLAPDSPITLQSPHIEEEETTSIATAR 169
            G+  E  PP P          GL         P    +     +P ++ E   S +   
Sbjct: 191 PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGE 247

Query: 170 RGSPGQEEELPQGQP-QSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPG----D 224
            GSPG     P+G P +     P+ + G    DG       PG   P   P  PG     
Sbjct: 248 NGSPGPMG--PRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAK 305

Query: 225 GLTAKASEKPPERKRSERVRRAEPPKP 251
           G       + PE  +  R     P  P
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSP 332



 Score = 36.2 bits (82), Expect = 0.22
 Identities = 55/222 (24%), Positives = 66/222 (29%), Gaps = 55/222 (24%)

Query: 47   PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
            PPGP    G       P G E  PG  DG     G  G+        + D G  G +   
Sbjct: 949  PPGPVGPPGLTGPAGEP-GREGSPGA-DGPPGRDGAAGV--------KGDRGETGAVGAP 998

Query: 107  AGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIA 166
                   PGP G      P            +G + P  P     +Q P     +     
Sbjct: 999  GA-----PGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG 1053

Query: 167  -------------TARRGSPG-------QEEELPQGQPQSPNAPPSPSVGETLGDGIN-- 204
                         T  +G PG       Q    P G P  P  PP P VG +  DG N  
Sbjct: 1054 EPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAG-PSGPRGPPGP-VGPSGKDGANGI 1111

Query: 205  ------------SSQT----KPGGSSPPAHPSLPGDGLTAKA 230
                        S +T     PG   PP  P  PG G+   A
Sbjct: 1112 PGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSA 1153



 Score = 33.5 bits (75), Expect = 1.4
 Identities = 50/206 (24%), Positives = 59/206 (28%), Gaps = 32/206 (15%)

Query: 47  PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWD 106
           PPGP+  +G       P G +  PG      E    G      P  P    GP+G     
Sbjct: 760 PPGPAGFAG-------PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGP---- 808

Query: 107 AGDQTLEPGPGGQTPEVVPPDPGAGANSCSP--EGLLEPLAPDSPITLQSPHIEEEETTS 164
            G    +   G Q P      PGA      P   G   P  P  P     P     ++  
Sbjct: 809 TGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP 868

Query: 165 IATARR-------GSPGQEEELPQGQPQSPNAPPSPS--------VGETLGDGINSSQTK 209
              A         G PG++ E     P     PP P         VG     G       
Sbjct: 869 PGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL 928

Query: 210 PGGSSPPAHPSLPGDGLTAKASEKPP 235
           PG S  P     PG    A     PP
Sbjct: 929 PGPSGEPGKQGAPG----ASGDRGPP 950



 Score = 33.1 bits (74), Expect = 1.9
 Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 35/118 (29%)

Query: 108 GDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIAT 167
           G    +PGP GQ  E     PG   +   P+G   P  P  P   Q P  +  +      
Sbjct: 25  GQDVRQPGPKGQKGE-----PGDIKDIVGPKG---PPGPQGPAGEQGPRGDRGDK----- 71

Query: 168 ARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDG 225
             +G+PG     P+G+   P  P +P                 G   PP  P  PG G
Sbjct: 72  GEKGAPG-----PRGRDGEPGTPGNP-----------------GPPGPPGPPGPPGLG 107



 Score = 31.6 bits (70), Expect = 5.5
 Identities = 47/181 (25%), Positives = 59/181 (32%), Gaps = 32/181 (17%)

Query: 47  PPGPSPSSGALDL--------------LDTPAGLEKDPGVLDGATELLGLGGLLYKAPSP 92
           PPGP+ S+GA                    P G +  PG      E    G      P  
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798

Query: 93  PEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITL 152
           P    GP+G      G    +   G Q P      PGA A    P G      P  P   
Sbjct: 799 PSGAPGPQG----PTGVTGPKGARGAQGPPGATGFPGA-AGRVGPPGSNGNPGPPGP--- 850

Query: 153 QSPHIEEEETTSIATARRGSPGQEEELPQGQP--QSPNAPPSPSVGETLGDGINSSQTKP 210
             P    ++    A    G PG+      G+P  Q P  PP    GE   DG + ++  P
Sbjct: 851 --PGPSGKDGPKGARGDSGPPGR-----AGEPGLQGPAGPPGEK-GEPGDDGPSGAEGPP 902

Query: 211 G 211
           G
Sbjct: 903 G 903


>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
           preproprotein [Homo sapiens]
          Length = 178

 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 46/166 (27%), Positives = 57/166 (34%), Gaps = 24/166 (14%)

Query: 32  EDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS 91
           ED+ + ++       P GPSP  G     + P G    PG   G       GG   + P 
Sbjct: 21  EDVSQEESPSLIAGNPQGPSPQGG-----NKPQGPPPPPGKPQGPPPQ---GGNKPQGPP 72

Query: 92  PPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPD------PGAGANSCSPEGLLEPLA 145
           PP    GP        GD++  P      P+  PP       P A   S S      P  
Sbjct: 73  PPGKPQGPP-----PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGK 127

Query: 146 PDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPP 191
           P  P     P  E            G+P Q +  P GQPQ P  PP
Sbjct: 128 PQGP-----PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 168



 Score = 38.1 bits (87), Expect = 0.058
 Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 18/136 (13%)

Query: 114 PGP-GGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGS 172
           P P GG  P+  PP PG       P+G  +P  P  P   Q P  + +++ S        
Sbjct: 39  PSPQGGNKPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQGDKSRS-------- 89

Query: 173 PGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHPSLPGDGLTAKASE 232
                  P+  P  P  PP P  G+  G             SPP  P  P          
Sbjct: 90  -------PRSPPGKPQGPP-PQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQG 141

Query: 233 KPPERKRSERVRRAEP 248
            PP    + +  +A P
Sbjct: 142 PPPPAGGNPQQPQAPP 157



 Score = 36.6 bits (83), Expect = 0.17
 Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 144 LAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGI 203
           LA  S   L     +EE  + IA   +G   Q    PQG P  P  P  P          
Sbjct: 11  LALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP--------- 61

Query: 204 NSSQTKPGGSSPPAHP-SLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTES 259
                KP G  PP  P   P  G  +++   PP + +    +  +P  P     ++S
Sbjct: 62  PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKS 118


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 99/418 (23%), Positives = 142/418 (33%), Gaps = 70/418 (16%)

Query: 3    PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTA------PTRGWAPPGPSPSSGA 56
            P D   P +P    +    GD   D E G+      T       P     PPGP+   G 
Sbjct: 1344 PGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGR 1403

Query: 57   LDLLDTP--AGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGT--LAWDAGDQTL 112
                     AGLE  PG     T  +G  G    AP  P    GP+G   +    G+Q L
Sbjct: 1404 QGEKGAKGEAGLEGPPG----KTGPIGPQG----APGKP----GPDGLRGIPGPVGEQGL 1451

Query: 113  --EPGPGGQTPEVVPPD-PGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATAR 169
               PGP G    + PP  PG   +S  P+G  E   P     +  P  + E+        
Sbjct: 1452 PGSPGPDGPPGPMGPPGLPGLKGDS-GPKG--EKGHPGLIGLIGPPGEQGEKGDRGLPGP 1508

Query: 170  RGSPGQEEELPQGQPQSPNAPPSPS--------VGETLGDGINSSQTKPGGSSPPAHPSL 221
            +GS G + E     P  P  PP P          G     G    + + G   PP  P  
Sbjct: 1509 QGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGP 1568

Query: 222  PGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVP 281
            PG+ +        P   ++ R RR                  + D+  ++DD N E++V 
Sbjct: 1569 PGEVIQ-------PLPIQASRTRR------------------NIDASQLLDDGNGENYVD 1603

Query: 282  FRPRRSPRM----SLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGL---PQLF 334
            +            SL+  + Q   +  +GT+   A     LQ     +        P   
Sbjct: 1604 YADGMEEIFGSLNSLKLEIEQM--KRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQG 1661

Query: 335  CSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQ 392
            CS      +    +G  TC F  K+    + +   +   G  F EF     LS  +A+
Sbjct: 1662 CSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAE 1719



 Score = 43.9 bits (102), Expect = 0.001
 Identities = 64/256 (25%), Positives = 85/256 (33%), Gaps = 53/256 (20%)

Query: 5   DFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPA 64
           ++P   DP  L ++P     PV+       +  +  PT   A P P  S GA        
Sbjct: 276 EYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTEAAPMPETSEGA-------- 327

Query: 65  GLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAG----DQTLEPGPGGQT 120
                     G  E +G+G   Y  PS       P   L +  G    DQ  +PG G + 
Sbjct: 328 ----------GKEEDVGIGDYDY-VPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 376

Query: 121 PEVV---------PPDPGAGANSCSPEGLLEPLA------------PDSPITLQSPHIEE 159
           P             P PG GA+    E   E +             P S  +   P +  
Sbjct: 377 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA 436

Query: 160 EETTSI--ATARRGSPGQEEELPQGQP----QSPNAPPSPS--VGETLGDGINSSQTKPG 211
            + T        RG  GQ+ E    +P    + P  P  P+   G     G       PG
Sbjct: 437 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 496

Query: 212 GSSPPAHPSLPG-DGL 226
              PP  P LPG DGL
Sbjct: 497 ERGPPGRPGLPGADGL 512



 Score = 37.7 bits (86), Expect = 0.076
 Identities = 56/207 (27%), Positives = 66/207 (31%), Gaps = 43/207 (20%)

Query: 47  PPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDH----GPEGT 102
           PPGP+   G        AG +   G + G T   G  G    A  P E  H    GP G 
Sbjct: 599 PPGPAGKPGRRGR----AGSDGARG-MPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGP 653

Query: 103 LAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEET 162
                GD       G   P  +P +PG       P GLL P  P  P             
Sbjct: 654 PG-PPGDDGERGDDGEVGPRGLPGEPG-------PRGLLGPKGPPGPPGPPG-------- 697

Query: 163 TSIATARRGSPGQEEEL-PQGQPQSPNAPPSPSV-------------GETLGDGINSSQT 208
               T   G PG +  + PQG+P  P    +P               GE    G      
Sbjct: 698 ---VTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPG 754

Query: 209 KPGGSSPPAHPSLPGDGLTAKASEKPP 235
            PG   PP HP   G     K  + PP
Sbjct: 755 MPGADGPPGHPGKEGPP-GEKGGQGPP 780



 Score = 37.0 bits (84), Expect = 0.13
 Identities = 64/250 (25%), Positives = 80/250 (32%), Gaps = 59/250 (23%)

Query: 3    PSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDT 62
            P  FP P  P+ L   P         E GE     Q  P     P GPS + GA    D 
Sbjct: 1217 PRGFPGPPGPVGLQGLPGPPG-----EKGETGDVGQMGPPGPPGPRGPSGAPGA----DG 1267

Query: 63   PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPE 122
            P G    PG +       G  G + +   P E     E  L  + G     PGP G+  E
Sbjct: 1268 PQG---PPGGI-------GNPGAVGEKGEPGEAG---EPGLPGEGGP----PGPKGERGE 1310

Query: 123  VVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQG 182
                 P   A    P+G   P   D P                    +GSPG     P G
Sbjct: 1311 KGESGPSGAAGPPGPKG---PPGDDGP--------------------KGSPG-----PVG 1342

Query: 183  QPQSPNAPPSPS-VGETLGDGINSSQTKPGGSSPPAHPSLPG----DGLTAKASEKPPER 237
             P  P  P  P   G+    G      +PG +  P     PG     G         PE 
Sbjct: 1343 FPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEG 1402

Query: 238  KRSERVRRAE 247
            ++ E+  + E
Sbjct: 1403 RQGEKGAKGE 1412



 Score = 35.8 bits (81), Expect = 0.29
 Identities = 52/191 (27%), Positives = 57/191 (29%), Gaps = 30/191 (15%)

Query: 48   PGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGL----------GGLLYKAPSPPEVDH 97
            PGP    G    L  P GL   PG   G    +G           GG        P    
Sbjct: 855  PGPLGPPGEKGKLGVP-GLPGYPG-RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR 912

Query: 98   GPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHI 157
            GP G           E GP G T +  P     G     P G   P  P  P     P  
Sbjct: 913  GPTGPRG--------ERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGP-- 962

Query: 158  EEEETTSIATARRGSPGQEEELP-QGQPQSPNAP----PSPSVGETLGDGINSSQTKPGG 212
            +            G PGQ  E   QG+   P  P    P    GET   G    +  PG 
Sbjct: 963  KGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGET---GPMGERGHPGP 1019

Query: 213  SSPPAHPSLPG 223
              PP    LPG
Sbjct: 1020 PGPPGEQGLPG 1030



 Score = 35.4 bits (80), Expect = 0.38
 Identities = 57/248 (22%), Positives = 76/248 (30%), Gaps = 45/248 (18%)

Query: 47   PPGPSPSSGALDLLDT--PAGLEKDPGVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLA 104
            PPGP+ S G         P G+   PG           G    K P  P    G +G + 
Sbjct: 1082 PPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVG 1141

Query: 105  WDAGDQTL-EPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSPHIEEEETT 163
                   +  PG  G   E+  P           +G   P  P  PI    P   + E  
Sbjct: 1142 LPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPG 1201

Query: 164  SIATARRGSPGQE-EELPQGQP--------------------------QSPNAPPSPSVG 196
                 ++G  GQ+ +E P+G P                            P  PP P  G
Sbjct: 1202 --PRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPR-G 1258

Query: 197  ETLGDGINSSQTKPGGSSPP------------AHPSLPGDGLTAKASEKPPERKRSERVR 244
             +   G +  Q  PGG   P              P LPG+G       +  E+  S    
Sbjct: 1259 PSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSG 1318

Query: 245  RAEPPKPE 252
             A PP P+
Sbjct: 1319 AAGPPGPK 1326


>gi|58530845 zyxin [Homo sapiens]
          Length = 572

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 107/505 (21%), Positives = 161/505 (31%), Gaps = 84/505 (16%)

Query: 7   PSPFDPLTLPEKPLAGD----------------LPVDMEFGEDLLESQTAPTRGWAPPGP 50
           P P +   LP  PLAGD                 P++  F    LE +  P+    PP P
Sbjct: 65  PPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPS---PPPPP 121

Query: 51  SPSSGALDLLDTPAGLEKDPGVLDGATELLG--LGGLLYKAPSPPEVDHG--PEGTLAWD 106
               G    +  P    +    +D   + L   L  +    P    V  G  P       
Sbjct: 122 EEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPF 181

Query: 107 AGDQTLEPGPGGQTP----------EVVPPDPGAGANSCS----------PEGLLEPLAP 146
           +   + +P  GG  P          + +P  P    +             P+  L   + 
Sbjct: 182 SSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQ 241

Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSS 206
             P++L +        +S A A + SP   +  P     SP AP     G      +   
Sbjct: 242 TQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGS--GSQPNQKLGHP 299

Query: 207 QTKPGGSSPPAHPSL------PGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESI 260
           +    G+  P  PS           +  K    PP  +   +VR    P P  +   E +
Sbjct: 300 EALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPPPAQNQNQVRSPGAPGPLTLKEVEEL 359

Query: 261 PVSDEDSDAMVDDPNDEDF-VPFRPRRSPRMSLRSSVSQRA-GRSAVGTKMTCAHCRTPL 318
               +     ++ P  ++  V     R  +   R+  + RA G+       TC  C   L
Sbjct: 360 EQLTQQLMQDMEHPQRQNVAVNELCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQL 419

Query: 319 QKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFH 378
           Q GQ  Y  +G P  +C      T  K       C  C + I    D ++  TG     H
Sbjct: 420 Q-GQQFYSLEGAP--YCEGCYTDTLEK-------CNTCGEPI---TDRMLRATGKAYHPH 466

Query: 379 EFCTSVCLSLYEA------QQQRP--IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHR 430
            F   VC    E       Q  RP  +P       A RCS+C +   ++ E      V  
Sbjct: 467 CFTCVVCARPLEGTSFIVDQANRPHCVPDY-HKQYAPRCSVCSE--PIMPEPGRDETVRV 523

Query: 431 LCSDSCFSKFRANKGLKTNCCDQCG 455
           +  D  F        +K   C+ CG
Sbjct: 524 VALDKNFH-------MKCYKCEDCG 541



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 56/237 (23%), Positives = 87/237 (36%), Gaps = 31/237 (13%)

Query: 126 PDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE-----EEETTSIATARRGSPGQEEELP 180
           P P    +  +P     P     P+    P +      + E      A+R   G+  E+P
Sbjct: 6   PSPAISVSVSAP-AFYAPQKKFGPVVAPKPKVNPFRPGDSEPPPAPGAQRAQMGRVGEIP 64

Query: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHP----SLPGDGLTAKASEKPPE 236
              P+    PP P  G+  GD    ++   GG+ PP  P    S P   L  +    PP 
Sbjct: 65  PPPPEDFPLPPPPLAGD--GD---DAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSPPP 119

Query: 237 RKRSERVRRAE-PPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRS-----PRM 290
               E    A  PP P+  +   SI +  +   +++DD    D  PF+ R S     P +
Sbjct: 120 PPEEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKND--PFKARVSSGYVPPPV 177

Query: 291 SLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
           +   S       +A GT         PL   ++    + LPQ+   +   T F  +P
Sbjct: 178 ATPFSSKSSTKPAAGGT--------APLPPWKSPSSSQPLPQVPAPAQSQTQFHVQP 226


>gi|4508047 zyxin [Homo sapiens]
          Length = 572

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 107/505 (21%), Positives = 161/505 (31%), Gaps = 84/505 (16%)

Query: 7   PSPFDPLTLPEKPLAGD----------------LPVDMEFGEDLLESQTAPTRGWAPPGP 50
           P P +   LP  PLAGD                 P++  F    LE +  P+    PP P
Sbjct: 65  PPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEESFPPAPLEEEIFPS---PPPPP 121

Query: 51  SPSSGALDLLDTPAGLEKDPGVLDGATELLG--LGGLLYKAPSPPEVDHG--PEGTLAWD 106
               G    +  P    +    +D   + L   L  +    P    V  G  P       
Sbjct: 122 EEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPF 181

Query: 107 AGDQTLEPGPGGQTP----------EVVPPDPGAGANSCS----------PEGLLEPLAP 146
           +   + +P  GG  P          + +P  P    +             P+  L   + 
Sbjct: 182 SSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQ 241

Query: 147 DSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSS 206
             P++L +        +S A A + SP   +  P     SP AP     G      +   
Sbjct: 242 TQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGS--GSQPNQKLGHP 299

Query: 207 QTKPGGSSPPAHPSL------PGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESI 260
           +    G+  P  PS           +  K    PP  +   +VR    P P  +   E +
Sbjct: 300 EALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPPPAQNQNQVRSPGAPGPLTLKEVEEL 359

Query: 261 PVSDEDSDAMVDDPNDEDF-VPFRPRRSPRMSLRSSVSQRA-GRSAVGTKMTCAHCRTPL 318
               +     ++ P  ++  V     R  +   R+  + RA G+       TC  C   L
Sbjct: 360 EQLTQQLMQDMEHPQRQNVAVNELCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQL 419

Query: 319 QKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSVVAQTGSGGSFH 378
           Q GQ  Y  +G P  +C      T  K       C  C + I    D ++  TG     H
Sbjct: 420 Q-GQQFYSLEGAP--YCEGCYTDTLEK-------CNTCGEPI---TDRMLRATGKAYHPH 466

Query: 379 EFCTSVCLSLYEA------QQQRP--IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHR 430
            F   VC    E       Q  RP  +P       A RCS+C +   ++ E      V  
Sbjct: 467 CFTCVVCARPLEGTSFIVDQANRPHCVPDY-HKQYAPRCSVCSE--PIMPEPGRDETVRV 523

Query: 431 LCSDSCFSKFRANKGLKTNCCDQCG 455
           +  D  F        +K   C+ CG
Sbjct: 524 VALDKNFH-------MKCYKCEDCG 541



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 56/237 (23%), Positives = 87/237 (36%), Gaps = 31/237 (13%)

Query: 126 PDPGAGANSCSPEGLLEPLAPDSPITLQSPHIE-----EEETTSIATARRGSPGQEEELP 180
           P P    +  +P     P     P+    P +      + E      A+R   G+  E+P
Sbjct: 6   PSPAISVSVSAP-AFYAPQKKFGPVVAPKPKVNPFRPGDSEPPPAPGAQRAQMGRVGEIP 64

Query: 181 QGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSPPAHP----SLPGDGLTAKASEKPPE 236
              P+    PP P  G+  GD    ++   GG+ PP  P    S P   L  +    PP 
Sbjct: 65  PPPPEDFPLPPPPLAGD--GD---DAEGALGGAFPPPPPPIEESFPPAPLEEEIFPSPPP 119

Query: 237 RKRSERVRRAE-PPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPRRS-----PRM 290
               E    A  PP P+  +   SI +  +   +++DD    D  PF+ R S     P +
Sbjct: 120 PPEEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKND--PFKARVSSGYVPPPV 177

Query: 291 SLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKP 347
           +   S       +A GT         PL   ++    + LPQ+   +   T F  +P
Sbjct: 178 ATPFSSKSSTKPAAGGT--------APLPPWKSPSSSQPLPQVPAPAQSQTQFHVQP 226


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 57/243 (23%), Positives = 81/243 (33%), Gaps = 19/243 (7%)

Query: 47  PPGPSPSSGALDLLDT--PAGLEKDPGVLDGA-------TELLGLG--GLLYKAPSPPEV 95
           PPGP PS G++        AG     G +  A          LGL   GL+     PP +
Sbjct: 667 PPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPTTANHLGLSVPGLV---SVPPRL 723

Query: 96  DHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQSP 155
             GPE   A    D  L   P G  P  +PPD   G     P  +       S + +   
Sbjct: 724 LPGPENHRAGSNEDPIL--APSGTPPPTIPPDETFGGRVPRPAFVHYDKEEASDVEIS-- 779

Query: 156 HIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPGGSSP 215
            +E +   S+     G P      P G    P AP  P             +  P    P
Sbjct: 780 -LESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGP 838

Query: 216 PAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPN 275
              P  P   +    +  PP+           PP  E   +  +I  SDE+ +   ++  
Sbjct: 839 LPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEE 898

Query: 276 DED 278
           +E+
Sbjct: 899 EEE 901



 Score = 30.8 bits (68), Expect = 9.3
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 804 KIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKP 837
           ++P      PT PTP P PPP  P   +A    P
Sbjct: 634 RVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHP 667



 Score = 30.8 bits (68), Expect = 9.3
 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 158  EEEETTSIATARRGSPGQEEELPQGQPQSPNAPPS---------------PSVGETLGDG 202
            EEEE   +     G+ G E E  +G P  P  PP+               P  G  L   
Sbjct: 953  EEEELEEVEDLEFGTAGGEVE--EGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVE 1010

Query: 203  INSSQTKPGGSSPP--AHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESI 260
               ++ + G  + P  A  +LP  G   +  E P      + +   EP  P  +   E+ 
Sbjct: 1011 EPGTEEERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETE 1070

Query: 261  PVSDE 265
              SD+
Sbjct: 1071 DGSDK 1075


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,925,874
Number of Sequences: 37866
Number of extensions: 3993854
Number of successful extensions: 34874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 989
Number of HSP's that attempted gapping in prelim test: 24126
Number of HSP's gapped (non-prelim): 9137
length of query: 1370
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1255
effective length of database: 13,892,928
effective search space: 17435624640
effective search space used: 17435624640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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