Search of human proteins with 41281948

Search of human proteins with 41281948

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo
sapiens]
         (230 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo sap...   472   e-133
gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo sa...   469   e-132
gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo sa...   468   e-132
gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo sapi...   461   e-130
gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo sa...   457   e-129
gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo sa...   456   e-129
gi|40317616 transmembrane prostate androgen-induced protein isof...   304   5e-83
gi|21361841 transmembrane prostate androgen-induced protein isof...   302   1e-82
gi|40317620 transmembrane prostate androgen-induced protein isof...   282   2e-76
gi|40317618 transmembrane prostate androgen-induced protein isof...   282   2e-76
gi|55750053 atrophin-1 [Homo sapiens]                                  37   0.018
gi|55750041 atrophin-1 [Homo sapiens]                                  37   0.018
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ...    35   0.041
gi|23110964 cathepsin W preproprotein [Homo sapiens]                   35   0.070
gi|190341097 rhomboid family 1 [Homo sapiens]                          33   0.20 
gi|29789403 PDZ domain containing 8 [Homo sapiens]                     32   0.59 
gi|150456424 RW1 protein [Homo sapiens]                                31   0.78 
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ...    31   1.0  
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     30   1.7  
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    30   1.7  
gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo ...    30   2.3  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         30   2.3  
gi|62244004 modulator of estrogen induced transcription isoform ...    29   3.0  
gi|63176611 modulator of estrogen induced transcription isoform ...    29   3.0  
gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho...    29   3.0  
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho...    29   3.0  
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    29   3.0  
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ...    29   3.9  
gi|67782356 corneodesmosin precursor [Homo sapiens]                    29   3.9  
gi|189571643 sulfatase 1 [Homo sapiens]                                29   3.9  

>gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo
           sapiens]
          Length = 230

 Score =  472 bits (1215), Expect = e-133
 Identities = 230/230 (100%), Positives = 230/230 (100%)

Query: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPR 60
           MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPR
Sbjct: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPR 60

Query: 61  SRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQ 120
           SRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQ
Sbjct: 61  SRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQ 120

Query: 121 QMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYS 180
           QMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYS
Sbjct: 121 QMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYS 180

Query: 181 EVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV 230
           EVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
Sbjct: 181 EVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV 230


>gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo
           sapiens]
          Length = 251

 Score =  469 bits (1206), Expect = e-132
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPRSR 62
           AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPRSR
Sbjct: 24  AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPRSR 83

Query: 63  DRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQM 122
           DRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQM
Sbjct: 84  DRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQM 143

Query: 123 ELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEV 182
           ELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEV
Sbjct: 144 ELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEV 203

Query: 183 MGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV 230
           MGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
Sbjct: 204 MGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV 251


>gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo
           sapiens]
          Length = 288

 Score =  468 bits (1203), Expect = e-132
 Identities = 227/228 (99%), Positives = 228/228 (100%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPRSR 62
           +ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPRSR
Sbjct: 61  SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQIMHAPRSR 120

Query: 63  DRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQM 122
           DRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQM
Sbjct: 121 DRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQM 180

Query: 123 ELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEV 182
           ELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEV
Sbjct: 181 ELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEV 240

Query: 183 MGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV 230
           MGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
Sbjct: 241 MGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV 288


>gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo
           sapiens]
          Length = 248

 Score =  461 bits (1186), Expect = e-130
 Identities = 230/248 (92%), Positives = 230/248 (92%), Gaps = 18/248 (7%)

Query: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ------ 54
           MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ      
Sbjct: 1   MAAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWP 60

Query: 55  ------------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 102
                       IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE
Sbjct: 61  SDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 120

Query: 103 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 162
           EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS
Sbjct: 121 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 180

Query: 163 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK 222
           ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK
Sbjct: 181 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGK 240

Query: 223 DRKPGNLV 230
           DRKPGNLV
Sbjct: 241 DRKPGNLV 248


>gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo
           sapiens]
          Length = 269

 Score =  457 bits (1177), Expect = e-129
 Identities = 228/246 (92%), Positives = 228/246 (92%), Gaps = 18/246 (7%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 54
           AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ        
Sbjct: 24  AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 83

Query: 55  ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 104
                     IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 84  SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 143

Query: 105 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 164
           PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 144 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 203

Query: 165 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 224
           TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 204 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 263

Query: 225 KPGNLV 230
           KPGNLV
Sbjct: 264 KPGNLV 269


>gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo
           sapiens]
          Length = 306

 Score =  456 bits (1174), Expect = e-129
 Identities = 227/246 (92%), Positives = 228/246 (92%), Gaps = 18/246 (7%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 54
           +ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ        
Sbjct: 61  SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120

Query: 55  ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 104
                     IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180

Query: 105 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 164
           PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240

Query: 165 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 224
           TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300

Query: 225 KPGNLV 230
           KPGNLV
Sbjct: 301 KPGNLV 306


>gi|40317616 transmembrane prostate androgen-induced protein isoform
           b [Homo sapiens]
          Length = 252

 Score =  304 bits (778), Expect = 5e-83
 Identities = 161/250 (64%), Positives = 181/250 (72%), Gaps = 25/250 (10%)

Query: 3   AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL---------- 52
           AELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L          
Sbjct: 2   AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61

Query: 53  ----------PQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 102
                     PQ+   PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE
Sbjct: 62  STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121

Query: 103 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 162
           EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGIS
Sbjct: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180

Query: 163 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 218
           A+   S GRMEGPPPTYSEV+GH+PG+SF H Q S   +   G+RL        ES  + 
Sbjct: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240

Query: 219 IKGKDRKPGN 228
            K KD++ G+
Sbjct: 241 SKEKDKQKGH 250


>gi|21361841 transmembrane prostate androgen-induced protein isoform
           a [Homo sapiens]
          Length = 287

 Score =  302 bits (774), Expect = 1e-82
 Identities = 160/249 (64%), Positives = 180/249 (72%), Gaps = 25/249 (10%)

Query: 4   ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL----------- 52
           ELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L           
Sbjct: 38  ELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSES 97

Query: 53  ---------PQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEE 103
                    PQ+   PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEE
Sbjct: 98  TVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEE 157

Query: 104 PPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISA 163
           PPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGISA
Sbjct: 158 PPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISA 216

Query: 164 STCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPI 219
           +   S GRMEGPPPTYSEV+GH+PG+SF H Q S   +   G+RL        ES  +  
Sbjct: 217 TCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWS 276

Query: 220 KGKDRKPGN 228
           K KD++ G+
Sbjct: 277 KEKDKQKGH 285


>gi|40317620 transmembrane prostate androgen-induced protein isoform
           c [Homo sapiens]
          Length = 237

 Score =  282 bits (721), Expect = 2e-76
 Identities = 148/234 (63%), Positives = 167/234 (71%), Gaps = 25/234 (10%)

Query: 19  VMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL--------------------PQIMHA 58
           VMVVVI CLL+HYK+S RSFI+R +Q RRRED L                    PQ+   
Sbjct: 3   VMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVYAP 62

Query: 59  PRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 118
           PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP
Sbjct: 63  PRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 122

Query: 119 EQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 178
           EQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGISA+   S GRMEGPPPT
Sbjct: 123 EQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISATCYGSGGRMEGPPPT 181

Query: 179 YSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPIKGKDRKPGN 228
           YSEV+GH+PG+SF H Q S   +   G+RL        ES  +  K KD++ G+
Sbjct: 182 YSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGH 235


>gi|40317618 transmembrane prostate androgen-induced protein isoform
           c [Homo sapiens]
          Length = 237

 Score =  282 bits (721), Expect = 2e-76
 Identities = 148/234 (63%), Positives = 167/234 (71%), Gaps = 25/234 (10%)

Query: 19  VMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL--------------------PQIMHA 58
           VMVVVI CLL+HYK+S RSFI+R +Q RRRED L                    PQ+   
Sbjct: 3   VMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVYAP 62

Query: 59  PRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 118
           PR  DR   P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP
Sbjct: 63  PRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 122

Query: 119 EQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 178
           EQQ+ELNRESVRAPPNRTIFDSDL+D A   GGPCPPSSNSGISA+   S GRMEGPPPT
Sbjct: 123 EQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISATCYGSGGRMEGPPPT 181

Query: 179 YSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPIKGKDRKPGN 228
           YSEV+GH+PG+SF H Q S   +   G+RL        ES  +  K KD++ G+
Sbjct: 182 YSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGH 235


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 37/137 (27%)

Query: 77  SRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRT 136
           S+  P+YP+       PP  SLS   +PP Y  P       P Q                
Sbjct: 402 SQALPSYPH-----SFPPPTSLSVSNQPPKYTQPSL-----PSQ---------------- 435

Query: 137 IFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQR 196
                    A++S GP PP     + A++ +  G    PP T ++   H P ++  HH +
Sbjct: 436 ---------AVWSQGPPPPPPYGRLLANSNAHPGPF--PPSTGAQSTAHPPVSTHHHHHQ 484

Query: 197 SNAHRGSRLQFQQNNAE 213
               +  + Q QQ   +
Sbjct: 485 QQQQQQQQQQQQQQQQQ 501


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 37/137 (27%)

Query: 77  SRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRT 136
           S+  P+YP+       PP  SLS   +PP Y  P       P Q                
Sbjct: 402 SQALPSYPH-----SFPPPTSLSVSNQPPKYTQPSL-----PSQ---------------- 435

Query: 137 IFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQR 196
                    A++S GP PP     + A++ +  G    PP T ++   H P ++  HH +
Sbjct: 436 ---------AVWSQGPPPPPPYGRLLANSNAHPGPF--PPSTGAQSTAHPPVSTHHHHHQ 484

Query: 197 SNAHRGSRLQFQQNNAE 213
               +  + Q QQ   +
Sbjct: 485 QQQQQQQQQQQQQQQQQ 501


>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
            subunit [Homo sapiens]
          Length = 2339

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 6/139 (4%)

Query: 72   QRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRA 131
            +RDR  R     P +  ++D  P+ ++  G   PP +GP   + R+ E++ E  R   R 
Sbjct: 2059 RRDRKQRSLEKGPSLSADMDGAPSSAVGPGL--PPGEGPTGCR-RERERRQERGRSQERR 2115

Query: 132  PPNRTIFDSDLIDIAMYSGGPCPPSSNSGISA-STCSSNGRMEGPPPTYSEVMGHHPGAS 190
             P+ +  +          GG  PP     +S+  T  + G+  GP P  S  +   P  S
Sbjct: 2116 QPSSSSSEKQRFYSCDRFGGREPPKPKPSLSSHPTSPTAGQEPGPHPQGSGSVNGSPLLS 2175

Query: 191  FLHHQRSNAHRGSRLQFQQ 209
                  S   RG R Q  Q
Sbjct: 2176 --TSGASTPGRGGRRQLPQ 2192


>gi|23110964 cathepsin W preproprotein [Homo sapiens]
          Length = 376

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 109 GPCTLQLRDPEQQMELNRESV-RAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCS 167
           GP T+ +    + ++L R+ V +A P  T  D  L+D ++   G     S  GI A T S
Sbjct: 258 GPITVTIN--MKPLQLYRKGVIKATP--TTCDPQLVDHSVLLVGFGSVKSEEGIWAETVS 313

Query: 168 SNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKP 226
           S  + + P PT   ++ +  GA +        HRGS      N    T  P+  + +KP
Sbjct: 314 SQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGS------NTCGITKFPLTARVQKP 366


>gi|190341097 rhomboid family 1 [Homo sapiens]
          Length = 855

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 78  RFQPTYPYVQHEIDLPP--TISLSDGEEPPP-YQGPCTLQLR 116
           R+    P V  E+DLP    +SL+  E PPP Y GPC L ++
Sbjct: 112 RYGKLKPQVLRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQ 153


>gi|29789403 PDZ domain containing 8 [Homo sapiens]
          Length = 1154

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 92  LPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPP 133
           LPP I   DG +PPP +   T ++ DP Q  +  + S   PP
Sbjct: 552 LPPKIQSKDGNKPPPLK---TSEITDPAQVSKPTQGSAFKPP 590


>gi|150456424 RW1 protein [Homo sapiens]
          Length = 1883

 Score = 31.2 bits (69), Expect = 0.78
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 158  NSGISASTCSSNGRMEGPPPTYSEVMGHHPGAS 190
            NS    +T SS G  + PPP +  V  H PG+S
Sbjct: 1543 NSQELGNTSSSEGEKDSPPPEWDSVPVHKPGSS 1575


>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
            sapiens]
          Length = 1835

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 149  SGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVM 183
            S  P P ++N   +A + SS  + +GPPPT S+++
Sbjct: 973  SPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQML 1007


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 32/129 (24%), Positives = 44/129 (34%), Gaps = 17/129 (13%)

Query: 57  HAPRSRDRFTAPSFIQRD-------RFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQG 109
           + PR+R++FT PS + RD       R  R +      QH     P  S S  + P     
Sbjct: 201 YEPRAREQFTLPSVVHRDIYRDDITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLAS 260

Query: 110 PCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSN 169
             +   R P      +R S           SD I  +  +      SS+S    S   S 
Sbjct: 261 QASRPTRSPSGSGSRSRSS----------SSDSISSSSSTSSDSSDSSSSSSDDSPARSV 310

Query: 170 GRMEGPPPT 178
                P PT
Sbjct: 311 QSAAVPAPT 319


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 28/101 (27%)

Query: 81  PTYP---YVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTI 137
           PT P    +Q+++ +PP  S      P P Q P   Q + PE  +         PP   +
Sbjct: 829 PTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPL---------PPAPHL 879

Query: 138 FDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 178
                           PPSS S   AS+  ++ R+  P P+
Sbjct: 880 ----------------PPSSTSSAVASSSETSSRLPAPTPS 904


>gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo
            sapiens]
          Length = 2923

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 86   VQHEIDLPP----TISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRA 131
            VQ + D P      +SLS G+ P P  GP  L   D ++++ LNR  + A
Sbjct: 1169 VQRDTDAPGGHILNVSLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLLTA 1218


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 93   PPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGP 152
            P   S+S  E  PP  GPC                S+  PP +       I++ + +GG 
Sbjct: 2791 PSVRSMSGPESSPPIGGPCE----------AAPSSSLPTPPQQPFIARRHIELGV-TGGG 2839

Query: 153  CPPSSNSGISASTCSSNGRMEGPPP 177
             P + +  + A T  +  R  G PP
Sbjct: 2840 SPENGDGALLAITPPAVKRRRGRPP 2864


>gi|62244004 modulator of estrogen induced transcription isoform b
           [Homo sapiens]
          Length = 1016

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 60  RSRDRFTAPSFIQ------RDRF---SRFQPTYPYVQHEID----LPPTISLSDGEEPPP 106
           R R RF   S +Q      RDRF   S  +   P  + E       P   S S   EPPP
Sbjct: 756 RERGRFPESSAVQSSSFERRDRFVGQSEGKKARPTARREDPSFERYPKNFSDSRRNEPPP 815

Query: 107 YQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAM----YSGGPCP--PSS-NS 159
            +     +LR+ +++        R    RT+   D  DI         GP P  P+S  S
Sbjct: 816 PRN----ELRESDRREVRGERDER----RTVIIHDRPDITHPRHPREAGPNPSRPTSWKS 867

Query: 160 GISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSR 204
             S ST     R+E P  +  EV GH    +   ++ S +  GSR
Sbjct: 868 EGSMSTDKRETRVERPERSGREVSGHSVRGAPPGNRSSASGYGSR 912


>gi|63176611 modulator of estrogen induced transcription isoform a
           [Homo sapiens]
          Length = 1034

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 60  RSRDRFTAPSFIQ------RDRF---SRFQPTYPYVQHEID----LPPTISLSDGEEPPP 106
           R R RF   S +Q      RDRF   S  +   P  + E       P   S S   EPPP
Sbjct: 774 RERGRFPESSAVQSSSFERRDRFVGQSEGKKARPTARREDPSFERYPKNFSDSRRNEPPP 833

Query: 107 YQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAM----YSGGPCP--PSS-NS 159
            +     +LR+ +++        R    RT+   D  DI         GP P  P+S  S
Sbjct: 834 PRN----ELRESDRREVRGERDER----RTVIIHDRPDITHPRHPREAGPNPSRPTSWKS 885

Query: 160 GISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSR 204
             S ST     R+E P  +  EV GH    +   ++ S +  GSR
Sbjct: 886 EGSMSTDKRETRVERPERSGREVSGHSVRGAPPGNRSSASGYGSR 930


>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
           sapiens]
          Length = 1548

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 125 NRESVRAPPNRTIFDSDLIDIAMYSGGP----CPPSSNSGISASTCSSNGRMEGPPP 177
           +R+S++  P++    + L++ ++Y   P     PPS  + +++ + +S G    PPP
Sbjct: 23  SRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPP 79


>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
           sapiens]
          Length = 1549

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 125 NRESVRAPPNRTIFDSDLIDIAMYSGGP----CPPSSNSGISASTCSSNGRMEGPPP 177
           +R+S++  P++    + L++ ++Y   P     PPS  + +++ + +S G    PPP
Sbjct: 23  SRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRETSVASMSQTSGGEAGSPPP 79


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 93  PPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAP-PNRTIFDSDLIDIAMYSGG 151
           PP+ +  D     PY+       R P +    +R   R+P P R   +  +  I  + G 
Sbjct: 286 PPSYARRDSPTYDPYK-------RSPSESSSESRSRSRSPTPGR---EEKITFITSFGGS 335

Query: 152 PCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNN 211
                  +  +A+  +++G   G PP   +  G  PG +    +RS++   S    + ++
Sbjct: 336 ----DEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSS 391

Query: 212 AEST 215
           + S+
Sbjct: 392 SRSS 395


>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
           sapiens]
          Length = 389

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 16/77 (20%)

Query: 91  DLPPTISLSDGEE----PPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIA 146
           D  P + L D +     PPP      LQL DP+           APP  +   +  ++  
Sbjct: 65  DSSPGLQLHDPQSGTSAPPP-----GLQLHDPQT-------GTSAPPRVSSCTTRKLEHQ 112

Query: 147 MYSGGPCPPSSNSGISA 163
            +SG P  P SN  IS+
Sbjct: 113 PHSGSPAAPPSNCNISS 129


>gi|67782356 corneodesmosin precursor [Homo sapiens]
          Length = 529

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 156 SSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAES 214
           SS SG S    S + ++ G   ++S   G H G+S  H   S++ + S   FQ  N  +
Sbjct: 118 SSGSGSSLQGASGSSQL-GSSSSHSGSSGSHSGSSSSHSSSSSSFQFSSSSFQVGNGSA 175


>gi|189571643 sulfatase 1 [Homo sapiens]
          Length = 871

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 84  PYVQHEIDLPPTI-SLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIF 138
           P +   IDL PTI  ++  + PP   G   L+L DPE+     R + +A   R  F
Sbjct: 356 PQIVLNIDLAPTILDIAGLDTPPDVDGKSVLKLLDPEKPGNRFRTNKKAKIWRDTF 411


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,814,154
Number of Sequences: 37866
Number of extensions: 571040
Number of successful extensions: 2288
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 2204
Number of HSP's gapped (non-prelim): 82
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.