Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 40548389
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] 728 0.0
gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] 728 0.0
gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] 728 0.0
gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] 72 7e-13
gi|7657554 dickkopf-like 1 precursor [Homo sapiens] 58 1e-08
gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] 56 4e-08
gi|7657023 dickkopf homolog 2 precursor [Homo sapiens] 50 2e-06
gi|9625002 integrin, beta 6 [Homo sapiens] 42 0.001
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 40 0.004
gi|14165282 prokineticin 1 [Homo sapiens] 40 0.004
gi|62868217 laminin, beta 3 precursor [Homo sapiens] 39 0.005
gi|62868215 laminin, beta 3 precursor [Homo sapiens] 39 0.005
gi|189083719 laminin, beta 3 precursor [Homo sapiens] 39 0.005
gi|20127446 integrin, beta 5 [Homo sapiens] 39 0.005
gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens] 39 0.009
gi|49619239 variable charge, X-linked 2 [Homo sapiens] 38 0.012
gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] 36 0.045
gi|66932943 variable charge, X chromosome [Homo sapiens] 36 0.045
gi|46250735 keratin associated protein 10-2 [Homo sapiens] 36 0.045
gi|154759251 keratin associated protein 10-9 [Homo sapiens] 36 0.059
gi|49355828 variable charge, Y-linked 1B [Homo sapiens] 35 0.077
gi|4759304 variable charge, Y-linked [Homo sapiens] 35 0.077
gi|219842319 Bardet-Biedl syndrome 2 protein [Homo sapiens] 35 0.10
gi|48762947 variable charge, X-linked 3A [Homo sapiens] 35 0.13
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 35 0.13
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 35 0.13
gi|4557733 latent transforming growth factor beta binding protei... 34 0.17
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 34 0.17
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 34 0.17
gi|148727298 keratin associated protein 10-6 [Homo sapiens] 34 0.17
>gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 728 bits (1879), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 60
MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED
Sbjct: 1 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 60
Query: 61 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 120
TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN
Sbjct: 61 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 120
Query: 121 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 180
NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR
Sbjct: 121 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 180
Query: 181 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 240
DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL
Sbjct: 181 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 240
Query: 241 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 300
CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL
Sbjct: 241 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 300
Query: 301 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 350
PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI
Sbjct: 301 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 350
>gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 728 bits (1879), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 60
MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED
Sbjct: 1 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 60
Query: 61 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 120
TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN
Sbjct: 61 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 120
Query: 121 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 180
NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR
Sbjct: 121 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 180
Query: 181 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 240
DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL
Sbjct: 181 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 240
Query: 241 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 300
CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL
Sbjct: 241 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 300
Query: 301 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 350
PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI
Sbjct: 301 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 350
>gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 728 bits (1879), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 60
MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED
Sbjct: 1 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 60
Query: 61 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 120
TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN
Sbjct: 61 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 120
Query: 121 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 180
NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR
Sbjct: 121 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 180
Query: 181 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 240
DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL
Sbjct: 181 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 240
Query: 241 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 300
CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL
Sbjct: 241 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 300
Query: 301 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 350
PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI
Sbjct: 301 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 350
>gi|7657025 dickkopf homolog 4 precursor [Homo sapiens]
Length = 224
Score = 72.0 bits (175), Expect = 7e-13
Identities = 57/215 (26%), Positives = 78/215 (36%), Gaps = 65/215 (30%)
Query: 124 GQMVFSETVITSVGDEEG-RRSHECIIDEDCGPSMYC-QFASFQYTCQPCRGQRMLCTRD 181
G +V I S D G R+ +C+ D DC +C Q + C CRG R C RD
Sbjct: 17 GALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRD 76
Query: 182 SECCGDQLCVWGHCTKM------------------------------------------A 199
+ CC LCV CT M
Sbjct: 77 AMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQG 136
Query: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC----HDPASRLLDLITWE 255
+G G C DC PGLCCA R +C P+ +EG++C H ++ ++
Sbjct: 137 RKGQEGESCLRTFDCGPGLCCA--RHFWTKICKPVLLEGQVCSRRGHKDTAQAPEI---- 190
Query: 256 LEPDGALDRCPCASGLLCQP-----HSHSLVYVCK 285
RC C GLLC+ H+ + VC+
Sbjct: 191 ------FQRCDCGPGLLCRSQLTSNRQHARLRVCQ 219
>gi|7657554 dickkopf-like 1 precursor [Homo sapiens]
Length = 242
Score = 57.8 bits (138), Expect = 1e-08
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 82 SSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITNNQTGQMVFSETVITSVGDEEG 141
S+ ++ LP +YH E N + ++GNNT+ H +I K+T+N+TG+++ SE V+ S+ EG
Sbjct: 73 SAPMDFRGLPGNYHKEENQEHQLGNNTLSSHLQIDKMTDNKTGEVLISENVVASIQPAEG 132
>gi|7110719 dickkopf homolog 1 precursor [Homo sapiens]
Length = 266
Score = 56.2 bits (134), Expect = 4e-08
Identities = 47/177 (26%), Positives = 62/177 (35%), Gaps = 60/177 (33%)
Query: 145 HECIIDEDCGPSMYCQF------ASFQYTCQPCRGQRMLCTRDSECCGDQLCVWGHC--- 195
+ C DE+CG YC A Q C CR +R C R + CC C G C
Sbjct: 83 YPCAEDEECGTDEYCASPTRGGDAGVQI-CLACRKRRKRCMRHAMCCPGNYCKNGICVSS 141
Query: 196 ----------------------------------TKMA-TRGSNGTICDNQRDCQPGLCC 220
+KM T+G G++C DC GLCC
Sbjct: 142 DQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTKGQEGSVCLRSSDCASGLCC 201
Query: 221 AFQRGLLFPVCTPLPVEGELC---HDPASRLLDLITWELEPDGALDRCPCASGLLCQ 274
A R +C P+ EG++C S L++ RC C GL C+
Sbjct: 202 A--RHFWSKICKPVLKEGQVCTKHRRKGSHGLEI----------FQRCYCGEGLSCR 246
Score = 28.9 bits (63), Expect = 7.2
Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 17/94 (18%)
Query: 131 TVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLC 190
T+ + + +G+ C+ DC + C + C+P + +
Sbjct: 173 TLSSKMYHTKGQEGSVCLRSSDCASGLCCARHFWSKICKPVLKEGQV------------- 219
Query: 191 VWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQR 224
CTK +GS+G + C GL C Q+
Sbjct: 220 ----CTKHRRKGSHGLEIFQRCYCGEGLSCRIQK 249
>gi|7657023 dickkopf homolog 2 precursor [Homo sapiens]
Length = 259
Score = 50.4 bits (119), Expect = 2e-06
Identities = 45/188 (23%), Positives = 64/188 (34%), Gaps = 62/188 (32%)
Query: 137 GDEEGR---RSHECIIDEDCGPSMYCQFA-SFQYTCQPCRGQRMLCTRDSECCGDQLCVW 192
G ++G+ +++ C D++C YC C CR ++ C RD CC C
Sbjct: 65 GSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNN 124
Query: 193 GHC------------------------------------------TKMA-TRGSNGTICD 209
G C TKM+ +G G C
Sbjct: 125 GICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEGDPCL 184
Query: 210 NQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC---HDPASRLLDLITWELEPDGALDRCP 266
DC G CCA R +C P+ +GE+C S L++ RC
Sbjct: 185 RSSDCIEGFCCA--RHFWTKICKPVLHQGEVCTKQRKKGSHGLEI----------FQRCD 232
Query: 267 CASGLLCQ 274
CA GL C+
Sbjct: 233 CAKGLSCK 240
Score = 29.3 bits (64), Expect = 5.5
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 17/87 (19%)
Query: 134 TSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLCVWG 193
T + +G C+ DC C + C+P Q +CT
Sbjct: 170 TKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCT-------------- 215
Query: 194 HCTKMATRGSNGTICDNQRDCQPGLCC 220
K +GS+G + DC GL C
Sbjct: 216 ---KQRKKGSHGLEIFQRCDCAKGLSC 239
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 32/167 (19%)
Query: 158 YCQFASFQYTCQPCRGQRMLCTRDSEC-CGDQLCVWG------HCTKMATR--GSNGTIC 208
YCQ +F R + +LC + +C CG+ +C G +CT +G +C
Sbjct: 536 YCQCDNFSCV----RHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLC 591
Query: 209 DNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDG-----ALD 263
+ DC G C G P C P C DP + I L G +D
Sbjct: 592 SGRGDCVCGKCVCTNPGASGPTCERCPT----CGDPCNSKRSCIECHLSAAGQAREECVD 647
Query: 264 RCPCASGLLCQPHSHSL----------VYVCKPTFVGSRDQDGEILL 300
+C A + + S C TF+ + D +G+ ++
Sbjct: 648 KCKLAGATISEEEDFSKDGSVSCSLQGENECLITFLITTDNEGKTII 694
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 39.7 bits (91), Expect = 0.004
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Query: 158 YCQFASFQYTCQPCRGQRMLCTRDSEC-CGDQLCV--W-GHCTKMATR-----GSNGTIC 208
YC+ F +C +G+ +C+ +C CGD LC W G+ TR SNG +C
Sbjct: 546 YCECDDF--SCVRYKGE--MCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLC 601
Query: 209 DNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC 241
+ C+ G C Q G C P + C
Sbjct: 602 SGRGKCECGSCVCIQPGSYGDTCEKCPTCPDAC 634
>gi|14165282 prokineticin 1 [Homo sapiens]
Length = 105
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 208 CDNQRDCQPGLCCAFQ---RGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDR 264
C+ C G CCA RGL +CTPL EGE CH P S +
Sbjct: 26 CERDVQCGAGTCCAISLWLRGLR--MCTPLGREGEECH-PGSHKVPFFRKRKH-----HT 77
Query: 265 CPCASGLLC 273
CPC LLC
Sbjct: 78 CPCLPNLLC 86
>gi|62868217 laminin, beta 3 precursor [Homo sapiens]
Length = 1172
Score = 39.3 bits (90), Expect = 0.005
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 174 QRMLCTRDSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTP 233
QR C SE C V+ A++G+ G +CDN RD G C + F P
Sbjct: 314 QRCDCNGHSETCHFDPAVFA-----ASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRP 368
Query: 234 LPVEGELCHDPASRLLDLITWELEPDGALDRCPC---ASGLLCQPH-SHSLVYVCKPTFV 289
E C I+ E +PDGA+ PC +C+ H +CKP F
Sbjct: 369 GASIQETC----------ISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFT 418
Query: 290 G 290
G
Sbjct: 419 G 419
>gi|62868215 laminin, beta 3 precursor [Homo sapiens]
Length = 1172
Score = 39.3 bits (90), Expect = 0.005
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 174 QRMLCTRDSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTP 233
QR C SE C V+ A++G+ G +CDN RD G C + F P
Sbjct: 314 QRCDCNGHSETCHFDPAVFA-----ASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRP 368
Query: 234 LPVEGELCHDPASRLLDLITWELEPDGALDRCPC---ASGLLCQPH-SHSLVYVCKPTFV 289
E C I+ E +PDGA+ PC +C+ H +CKP F
Sbjct: 369 GASIQETC----------ISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFT 418
Query: 290 G 290
G
Sbjct: 419 G 419
>gi|189083719 laminin, beta 3 precursor [Homo sapiens]
Length = 1172
Score = 39.3 bits (90), Expect = 0.005
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 174 QRMLCTRDSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTP 233
QR C SE C V+ A++G+ G +CDN RD G C + F P
Sbjct: 314 QRCDCNGHSETCHFDPAVFA-----ASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRP 368
Query: 234 LPVEGELCHDPASRLLDLITWELEPDGALDRCPC---ASGLLCQPH-SHSLVYVCKPTFV 289
E C I+ E +PDGA+ PC +C+ H +CKP F
Sbjct: 369 GASIQETC----------ISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFT 418
Query: 290 G 290
G
Sbjct: 419 G 419
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 39.3 bits (90), Expect = 0.005
Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 154 GPSMYCQFASFQYTCQPCRGQRMLCTRDSEC-CGDQLCVWGHC-------TKMAT-RGSN 204
GP C ++C R + +LC+ EC CG+ C G+ T ++T RG +
Sbjct: 545 GPFCECD----NFSC--ARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRD 598
Query: 205 GTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDR 264
G IC + C G C + G +C P C D S D + L G D
Sbjct: 599 GQICSERGHCLCGQCQCTEPGAFGEMCEKCPT----CPDACSTKRDCVECLLLHSGKPDN 654
Query: 265 CPCASGLLCQ 274
C S LC+
Sbjct: 655 QTCHS--LCR 662
>gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens]
Length = 108
Score = 38.5 bits (88), Expect = 0.009
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 208 CDNQRDCQPGLCCAFQRGL-LFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDRCP 266
CD C G+CCA + +CTP+ G+ CH P +R + + CP
Sbjct: 34 CDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCH-PLTRKVPFFGRRMH-----HTCP 87
Query: 267 CASGLLC 273
C GL C
Sbjct: 88 CLPGLAC 94
>gi|49619239 variable charge, X-linked 2 [Homo sapiens]
Length = 139
Score = 38.1 bits (87), Expect = 0.012
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 15 AAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQH---KLRSAVEE 71
AA A AP A SAP PGP+ P +E +E+ E E + E TQH S VEE
Sbjct: 55 AATKMAAVTAPEAESAPAAPGPS-DQPSQELPQHELPPE-EPVSEGTQHDPLSQESEVEE 112
Query: 72 MEAEEAAAKASSEVNLANLPP 92
++E+ + V +A+ P
Sbjct: 113 PLSQESEVEEPLTVWMASFSP 133
>gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]
Length = 636
Score = 36.2 bits (82), Expect = 0.045
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 14 AAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVEEM- 72
A ++ T P+ PTA +P G AL QE T NE+ ++ ++ E+ + RS E M
Sbjct: 426 ALSIQTPPSSPPTAFGSPEGAG-ALLRKQELVTQNELLKQQVKIFEEDFQRERSDRERMN 484
Query: 73 ----EAEEAAAKASSEVNLAN 89
E ++ K ++V L+N
Sbjct: 485 EEKEELKKQVEKLQAQVTLSN 505
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 15 AAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVEEMEA 74
AA A AP A SAP PGP+ P +E +E+ E E + E TQH S +E E
Sbjct: 55 AATKMAAVTAPEAESAPAAPGPS-DQPSQELPQHELPPE-EPVSEGTQHDPLS--QEAEL 110
Query: 75 EEAAAKAS 82
EE ++ S
Sbjct: 111 EEPLSQES 118
>gi|46250735 keratin associated protein 10-2 [Homo sapiens]
Length = 255
Score = 36.2 bits (82), Expect = 0.045
Identities = 37/150 (24%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 147 CIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLCVWGHCTKMATRGSNGT 206
C + CG S CQ +S Q C + C R CC CV T + +
Sbjct: 109 CCVPVCCGASSCCQQSSCQPACCASSSCQQSC-RVPVCCKAVCCV-------PTCSESSS 160
Query: 207 ICDNQRDCQPGLCCA--FQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDR 264
C Q CQP C + Q+ VC +C P GA
Sbjct: 161 SCCQQSSCQPACCTSSPCQQSCCVSVCCKPVCCKSICCVPVC------------SGASSP 208
Query: 265 C--------PCASGLLCQPHSHSLVYVCKP 286
C C + C+P S S+ +C+P
Sbjct: 209 CCQQSSCQPACCTSSCCRP-SSSVSLLCRP 237
>gi|154759251 keratin associated protein 10-9 [Homo sapiens]
Length = 292
Score = 35.8 bits (81), Expect = 0.059
Identities = 38/146 (26%), Positives = 52/146 (35%), Gaps = 23/146 (15%)
Query: 147 CIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDS---ECCGDQLCVWGHCTKMATRGS 203
C + CG S CQ +S+Q C C S CC C C + S
Sbjct: 109 CCVPVCCGASSCCQQSSYQPAC---------CASSSCQPACCVPVCCKPVCCAPTCSEDS 159
Query: 204 NGTICDNQRDCQPGLCCA--FQRGLLFPV-CTPLPVEGELCHDPASRLLDLITWELEPDG 260
C Q CQP C + Q+ PV C P+ + C S L +
Sbjct: 160 YS--CCQQSSCQPACCTSSPCQQSYCVPVCCKPVCCKPICCVPVCSGASSLCCQQSGCQP 217
Query: 261 ALDRCPCASGLLCQPHSHSLVYVCKP 286
A C + C+P S S+ +C+P
Sbjct: 218 A-----CCTTSCCRP-SSSVSLLCRP 237
>gi|49355828 variable charge, Y-linked 1B [Homo sapiens]
Length = 125
Score = 35.4 bits (80), Expect = 0.077
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 15 AAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVEEMEA 74
AA A AP A S P PGP+ P +E +E+ E E + E TQH S +E E
Sbjct: 55 AATKMAAVTAPEAESGPAAPGPS-DQPSQELPQHELPPE-EPVSEGTQHDPLS--QESEL 110
Query: 75 EEAAAKASSEVNLA 88
EE +K L+
Sbjct: 111 EEPLSKGRPSTPLS 124
>gi|4759304 variable charge, Y-linked [Homo sapiens]
Length = 125
Score = 35.4 bits (80), Expect = 0.077
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 15 AAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVEEMEA 74
AA A AP A S P PGP+ P +E +E+ E E + E TQH S +E E
Sbjct: 55 AATKMAAVTAPEAESGPAAPGPS-DQPSQELPQHELPPE-EPVSEGTQHDPLS--QESEL 110
Query: 75 EEAAAKASSEVNLA 88
EE +K L+
Sbjct: 111 EEPLSKGRPSTPLS 124
>gi|219842319 Bardet-Biedl syndrome 2 protein [Homo sapiens]
Length = 721
Score = 35.0 bits (79), Expect = 0.10
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 49 EMFREVEELMEDTQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNT 108
++ RE+ + ++ +LR+ E +AE A+ ++ + +P + T +GN T
Sbjct: 336 DLIRELSQKKQNLLLELRNYEENAKAELASPLNEADGHRGIIPANTRLHTTLSVSLGNET 395
Query: 109 IHVHREIHKITNNQT---GQMVFSETVIT 134
H E+ T+N T ++F+E + T
Sbjct: 396 QTAHTELRISTSNDTIIRAVLIFAEGIFT 424
>gi|48762947 variable charge, X-linked 3A [Homo sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 15 AAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVEEMEA 74
AA A AP A S P PGP+ P +E +E+ E E + E TQH S +E E
Sbjct: 55 AATKMAAVTAPEAESGPAAPGPS-DQPSQELPQHELPPE-EPVSEGTQHDPLS--QESEL 110
Query: 75 EEAAAKAS 82
EE ++ S
Sbjct: 111 EEPLSQES 118
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 34.7 bits (78), Expect = 0.13
Identities = 47/199 (23%), Positives = 67/199 (33%), Gaps = 55/199 (27%)
Query: 147 CIIDEDCGPSMYCQFASFQYTC---QPCRGQ-------RMLCTRDSECCGDQ----LCVW 192
C + CG S CQ +S Q C PC+ + +C+ S C Q CV
Sbjct: 124 CCVPVCCGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQSSCVSCVS 183
Query: 193 GHCTKMATRGS---NGTI------CDNQRDCQPGLC--CAFQRGLLFPVCTPLPVEGELC 241
C + S +G I C Q CQP C + Q+ PVC +C
Sbjct: 184 SPCCQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQACCVPVCCKTVCCKPVC 243
Query: 242 HDPASRLLDLITWE-----------------------LEPDGALDRCPCASGLLCQPHSH 278
+ +S + + +P G++ C AS L CQ S
Sbjct: 244 SEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQSS- 302
Query: 279 SLVYVCKPT-FVGSRDQDG 296
C+P S+ Q G
Sbjct: 303 -----CQPACCTSSQSQQG 316
Score = 30.4 bits (67), Expect = 2.5
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 156 SMYCQFASFQYTC---QPCRGQRMLCTRDSECCGDQLCVWGHCTKMATRGSNGTICDNQR 212
S CQ +S Q C PC Q+ C CC C + + S+ +C Q
Sbjct: 248 SSCCQQSSCQPACCTSSPC--QQACCV--PVCCKPVCCKPVGSVPICSGASS--LCCQQS 301
Query: 213 DCQPGLCCA--FQRGLLFPVC 231
CQP C + Q+G PVC
Sbjct: 302 SCQPACCTSSQSQQGCCVPVC 322
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 15 AAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVEEMEA 74
AA A AP A S P PGP+ P +E +E+ E E + E TQH S +E E
Sbjct: 55 AATKMAAVTAPEAESGPAAPGPS-DQPSQELPQHELPPE-EPVSEGTQHDPLS--QESEL 110
Query: 75 EEAAAKAS 82
EE ++ S
Sbjct: 111 EEPLSQES 118
>gi|4557733 latent transforming growth factor beta binding protein 2
[Homo sapiens]
Length = 1821
Score = 34.3 bits (77), Expect = 0.17
Identities = 39/142 (27%), Positives = 49/142 (34%), Gaps = 33/142 (23%)
Query: 145 HECIIDEDCGPSMYC--QFASFQYTCQP----CRGQRMLCTRDSECCGDQLCVWGHCTKM 198
+EC+ +E C P C SF C P G C EC CV GHC
Sbjct: 1178 NECMGEEHCAPHGECLNSHGSFFCLCAPGFVSAEGGTS-CQDVDECATTDPCVGGHCVN- 1235
Query: 199 ATRGSNGTICDN--QRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWEL 256
T GS +C+ Q + G C V+ + C D + TW+
Sbjct: 1236 -TEGSFNCLCETGFQPSPESGEC----------------VDIDECEDYGDPVCG--TWKC 1276
Query: 257 EPDGALDRCPCASGLLCQPHSH 278
E RC L CQP H
Sbjct: 1277 ENSPGSYRCV----LGCQPGFH 1294
Score = 31.6 bits (70), Expect = 1.1
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 145 HECIIDEDCGPSMYCQFASFQYTCQPC----RGQRMLCTRDSECCGDQLCVWGHCTKMAT 200
+EC C P C + YTC C RGQ C +EC +C G CT +
Sbjct: 972 NECRHPGTC-PDGRCVNSPGSYTCLACEEGYRGQSGSCVDVNECLTPGVCAHGKCTNL-- 1028
Query: 201 RGSNGTICD-------NQRDCQPGLCCA 221
GS C+ +++ CQ CA
Sbjct: 1029 EGSFRCSCEQGYEVTSDEKGCQDVDECA 1056
Score = 30.8 bits (68), Expect = 1.9
Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 24/117 (20%)
Query: 146 ECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSEC-----CGD--QLCVWGHCTK- 197
EC C PS C + ++C+ C G C C D C+ G C
Sbjct: 1096 ECAFPGVC-PSGVCTNTAGSFSCKDCDGGYRPSPLGDSCEDVDECEDPQSSCLGGECKNT 1154
Query: 198 ------MATRG---SNGTICDN------QRDCQPGLCCAFQRGLLFPVCTPLPVEGE 239
+ +G +NGT+C++ + C P C G F +C P V E
Sbjct: 1155 VGSYQCLCPQGFQLANGTVCEDVNECMGEEHCAPHGECLNSHGSFFCLCAPGFVSAE 1211
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 34.3 bits (77), Expect = 0.17
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 49 EMFREVEELMEDTQHKLRSAVEEMEAEEAAAKASSE 84
E RE+EE+M+D + KLR E+M+ EE + E
Sbjct: 434 EKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEE 469
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 34.3 bits (77), Expect = 0.17
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 49 EMFREVEELMEDTQHKLRSAVEEMEAEEAAAKASSE 84
E RE+EE+M+D + KLR E+M+ EE + E
Sbjct: 434 EKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEE 469
>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
Length = 365
Score = 34.3 bits (77), Expect = 0.17
Identities = 29/111 (26%), Positives = 37/111 (33%), Gaps = 27/111 (24%)
Query: 147 CIIDEDCGPSMYCQFASFQYTC---QPCR--------------GQRMLCTRDSEC----- 184
C + CG S CQ +S Q C PC+ G C + S C
Sbjct: 124 CCVSVCCGDSSCCQQSSCQSACCTSSPCQQACCVPVCCKPVCSGISSSCCQQSSCVSCVS 183
Query: 185 --CGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCA--FQRGLLFPVC 231
C +C C T + C Q CQP C + Q+ PVC
Sbjct: 184 SPCCQAVCEPSPCQSGCTSSCTPSCC-QQSSCQPTCCTSSPCQQACCVPVC 233
Score = 32.7 bits (73), Expect = 0.50
Identities = 32/114 (28%), Positives = 37/114 (32%), Gaps = 32/114 (28%)
Query: 153 CGPSMYCQFASFQYTC---QPCRGQRML------------CTRDSE-CCGDQLCVWGHCT 196
C PS CQ +S Q TC PC+ + C+ DS CC C CT
Sbjct: 204 CTPSC-CQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVPTCSEDSSSCCQQSSCQPACCT 262
Query: 197 KMATR--------GSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELCH 242
+ T C Q CQP C A C P LCH
Sbjct: 263 SSPCQHACCVPVCSGASTSCCQQSSCQPACCTA-------SCCRPSSSVSLLCH 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,486,414
Number of Sequences: 37866
Number of extensions: 800153
Number of successful extensions: 5946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 5617
Number of HSP's gapped (non-prelim): 484
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.