Guide to the Human Genome
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Name: DKKL1 Sequence: fasta or formatted (242aa) NCBI GI: 7657554
Description:

dickkopf-like 1 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         16           3
 C cysteine            0.0          0           0
 D aspartate           4.5         11           1
 E glutamate           7.4         18           2
 F phenylalanine       2.9          7           1
 G glycine             7.0         17           2
 H histidine           5.4         13           1
 I isoleucine          4.5         11           2
 K lysine              5.0         12           1
 L leucine            15.3         37           5
 M methionine          1.7          4           1
 N asparagine          2.9          7           2
 P proline             5.8         14           2
 Q glutamine           4.5         11           1
 R arginine            7.4         18           3
 S serine              9.5         23           3
 T threonine           4.1         10           1
 V valine              3.7          9           2
 W tryptophan          0.8          2           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dickkopf-like 1 precursor 
DKK3                  0.072   dickkopf homolog 3 precursor 
DKK3                  0.072   dickkopf homolog 3 precursor 
DKK3                  0.072   dickkopf homolog 3 precursor 
MED23                 0.011   mediator complex subunit 23 isoform b 
MED23                 0.011   mediator complex subunit 23 isoform a 
CHST15                0.011   B cell RAG associated protein 
PLEKHG1               0.009   pleckstrin homology domain containing, family G (wit...
CCDC106               0.009   coiled-coil domain containing 106 
SEPN1                 0.009   selenoprotein N, 1 isoform 2 precursor 
SEPN1                 0.009   selenoprotein N, 1 isoform 1 precursor 
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CCDC88C               0.009   DVL-binding protein DAPLE 
NPW                   0.009   neuropeptide W preproprotein 
CDH29                 0.007   cadherin-like 29 
LRP5                  0.007   low density lipoprotein receptor-related protein 5 ...
SYTL2                 0.007   synaptotagmin-like 2 isoform d 
SYTL2                 0.007   synaptotagmin-like 2 isoform c 
MATN3                 0.007   matrilin 3 precursor 
TCP10L2               0.007   t-complex 10-like 2 
MRC2                  0.007   mannose receptor, C type 2 
TCP10                 0.007   t-complex 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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