Guide to the Human Genome
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Name: CHRDL2 Sequence: fasta or formatted (451aa) NCBI GI: 40353769
Description:

chordin-like 2

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         26           1
 C cysteine            7.1         32           2
 D aspartate           4.4         20           1
 E glutamate           7.3         33           2
 F phenylalanine       2.2         10           1
 G glycine             7.1         32           2
 H histidine           5.1         23           1
 I isoleucine          2.0          9           1
 K lysine              4.4         20           2
 L leucine             8.2         37           2
 M methionine          0.9          4           1
 N asparagine          0.9          4           1
 P proline            12.2         55           2
 Q glutamine           4.7         21           2
 R arginine            6.7         30           2
 S serine              8.2         37           2
 T threonine           4.9         22           2
 V valine              4.9         22           1
 W tryptophan          1.1          5           1
 Y tyrosine            2.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chordin-like 2 
CHRDL1                0.298   chordin-like 1 isoform 3 precursor 
CHRDL1                0.298   chordin-like 1 isoform 2 precursor 
CHRDL1                0.296   chordin-like 1 isoform 1 precursor 
CHRDL1                0.138   chordin-like 1 isoform 4 precursor 
KCP                   0.094   cysteine rich BMP regulator 2 isoform 2 
KCP                   0.092   cysteine rich BMP regulator 2 isoform 1 
CHRD                  0.086   chordin 
VWCE                  0.075   von Willebrand factor C and EGF domains 
CRIM1                 0.071   cysteine-rich motor neuron 1 
BMPER                 0.056   BMP-binding endothelial regulator precursor protein ...
FRAS1                 0.049   Fraser syndrome 1 
VWC2                  0.039   von Willebrand factor C domain containing 2 
VWC2L                 0.035   von Willebrand factor C domain-containing protein 2...
COL1A1                0.034   alpha 1 type I collagen preproprotein 
COL3A1                0.033   collagen type III alpha 1 preproprotein 
COL2A1                0.032   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL5A2                0.031   alpha 2 type V collagen preproprotein 
NELL2                 0.029   NEL-like protein 2 isoform d 
NELL2                 0.029   NEL-like protein 2 isoform c 
NELL2                 0.029   NEL-like protein 2 isoform b precursor 
NELL2                 0.029   NEL-like protein 2 isoform a 
NELL2                 0.029   NEL-like protein 2 isoform b precursor 
NELL1                 0.025   nel-like 1 isoform 2 precursor 
NELL1                 0.025   nel-like 1 isoform 1 precursor 
MUC5AC                0.025   mucin 5AC 
MUC5B                 0.025   mucin 5, subtype B, tracheobronchial 
PXDN                  0.025   peroxidasin 
VWF                   0.023   von Willebrand factor preproprotein 
THBS1                 0.023   thrombospondin 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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