Guide to the Human Genome
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Name: BMPER Sequence: fasta or formatted (685aa) NCBI GI: 37693519
Description:

BMP-binding endothelial regulator precursor protein

Referenced in:

Mucins
TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         27           2
 C cysteine           11.5         79           2
 D aspartate           4.1         28           2
 E glutamate           5.8         40           2
 F phenylalanine       3.9         27           1
 G glycine             8.0         55           2
 H histidine           2.6         18           1
 I isoleucine          3.4         23           1
 K lysine              6.3         43           1
 L leucine             6.7         46           4
 M methionine          1.0          7           1
 N asparagine          4.1         28           1
 P proline             6.0         41           2
 Q glutamine           4.7         32           2
 R arginine            5.4         37           2
 S serine              6.3         43           2
 T threonine           5.3         36           2
 V valine              7.3         50           2
 W tryptophan          1.5         10           1
 Y tyrosine            2.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BMP-binding endothelial regulator precursor protein ... 
KCP                   0.248   cysteine rich BMP regulator 2 isoform 1 
ZAN                   0.110   zonadhesin isoform 3 
ZAN                   0.110   zonadhesin isoform 6 
FCGBP                 0.109   Fc fragment of IgG binding protein 
SSPO                  0.108   SCO-spondin 
LOC100133944          0.108   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100290309          0.108   PREDICTED: hypothetical protein XP_002348012 
VWF                   0.106   von Willebrand factor preproprotein 
TECTA                 0.104   tectorin alpha precursor 
LOC100293676          0.099   PREDICTED: similar to Fc fragment of IgG binding pr...
MUC5B                 0.095   mucin 5, subtype B, tracheobronchial 
MUC2                  0.092   mucin 2 precursor 
LOC100294420          0.092   PREDICTED: similar to mucin 2 
C12orf64              0.090   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.090   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.090   PREDICTED: hypothetical protein LOC283310 
MUC5AC                0.089   mucin 5AC 
LOC100132635          0.089   PREDICTED: similar to mucin 5, partial 
LOC100291118          0.087   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.087   PREDICTED: hypothetical protein XP_002343203 
KCP                   0.087   cysteine rich BMP regulator 2 isoform 2 
OTOG                  0.081   PREDICTED: otogelin isoform 1 
OTOG                  0.081   PREDICTED: otogelin isoform 2 
OTOG                  0.081   PREDICTED: otogelin isoform 2 
OTOG                  0.081   PREDICTED: otogelin isoform 1 
OTOG                  0.081   PREDICTED: otogelin isoform 2 
OTOG                  0.081   PREDICTED: otogelin isoform 1 
FRAS1                 0.076   Fraser syndrome 1 
CRIM1                 0.074   cysteine-rich motor neuron 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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