Guide to the Human Genome
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Name: NOL9 Sequence: fasta or formatted (702aa) NCBI GI: 40217805
Description:

nucleolar protein 9

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         38           4
 C cysteine            3.1         22           1
 D aspartate           3.8         27           2
 E glutamate           5.6         39           2
 F phenylalanine       3.3         23           1
 G glycine             5.6         39           1
 H histidine           2.6         18           1
 I isoleucine          5.3         37           1
 K lysine              5.1         36           2
 L leucine            11.5         81           4
 M methionine          1.4         10           1
 N asparagine          3.1         22           2
 P proline             8.1         57           2
 Q glutamine           4.0         28           1
 R arginine            8.1         57           3
 S serine              7.8         55           2
 T threonine           5.3         37           2
 V valine              6.3         44           2
 W tryptophan          0.9          6           1
 Y tyrosine            3.7         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 9 
CLP1                  0.022   ATP/GTP-binding protein isoform 1 
MAP7D1                0.012   MAP7 domain containing 1 
FASLG                 0.010   fas ligand 
LOC100292143          0.009   PREDICTED: hypothetical protein 
LOC100132261          0.009   PREDICTED: similar to hCG2023245 
SH3BP1                0.009   SH3-domain binding protein 1 
TCERG1                0.008   transcription elongation regulator 1 isoform 2 [Homo...
LOC728650             0.008   PREDICTED: hypothetical protein 
TCERG1                0.008   transcription elongation regulator 1 isoform 1 [Homo...
CLP1                  0.007   ATP/GTP-binding protein isoform 2 
SAMD1                 0.007   sterile alpha motif domain containing 1 
LOC100128074          0.006   PREDICTED: hypothetical protein 
LOC100289126          0.006   PREDICTED: hypothetical protein XP_002343381 
TTMA                  0.006   hypothetical protein LOC645369 
LOC100292048          0.006   PREDICTED: hypothetical protein XP_002344877 
LOC100128074          0.006   PREDICTED: hypothetical protein 
GATA6                 0.006   GATA binding protein 6 
AFF3                  0.006   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.006   AF4/FMR2 family, member 3 isoform 1 
ASPSCR1               0.006   alveolar soft part sarcoma chromosome region, candid...
TNRC18                0.006   trinucleotide repeat containing 18 
MAP3K10               0.006   mitogen-activated protein kinase kinase kinase 10 [H...
ZBTB45                0.006   zinc finger and BTB domain containing 45 
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.006   eukaryotic translation initiation factor 4 gamma, 1 ...
SLC16A2               0.006   solute carrier family 16, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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