Guide to the Human Genome
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Name: CNNM3 Sequence: fasta or formatted (659aa) NCBI GI: 40068047
Description:

cyclin M3 isoform 2

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [707aa] cyclin M3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.5         89           3
 C cysteine            1.2          8           1
 D aspartate           4.1         27           2
 E glutamate           6.4         42           3
 F phenylalanine       3.2         21           1
 G glycine             8.3         55           3
 H histidine           1.8         12           2
 I isoleucine          1.8         12           1
 K lysine              2.4         16           1
 L leucine            15.0         99           4
 M methionine          0.8          5           1
 N asparagine          1.8         12           1
 P proline             6.5         43           2
 Q glutamine           3.2         21           1
 R arginine            7.7         51           2
 S serine              6.7         44           2
 T threonine           4.1         27           3
 V valine              8.0         53           2
 W tryptophan          1.2          8           1
 Y tyrosine            2.1         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin M3 isoform 2 
CNNM3                 0.982   cyclin M3 isoform 1 
CNNM2                 0.321   cyclin M2 isoform 2 
CNNM2                 0.317   cyclin M2 isoform 1 
CNNM1                 0.309   cyclin M1 
CNNM4                 0.302   cyclin M4 
CNNM2                 0.177   cyclin M2 isoform 3 
GPAA1                 0.009   glycosylphosphatidylinositol anchor attachment protei...
C2orf72               0.008   hypothetical protein LOC257407 
LOC100291976          0.008   PREDICTED: hypothetical protein XP_002345754 
LOC100131774          0.008   PREDICTED: hypothetical protein 
IRGQ                  0.007   immunity-related GTPase family, Q 
NPHP3                 0.006   nephrocystin 3 
EPPK1                 0.006   epiplakin 1 
CUGBP1                0.006   CUG triplet repeat, RNA-binding protein 1 isoform 3 ...
CUGBP1                0.006   CUG triplet repeat, RNA-binding protein 1 isoform 1 [...
RPUSD3                0.006   RNA pseudouridylate synthase domain containing 3 is...
LPPR2                 0.006   lipid phosphate phosphatase-related protein type 2 [...
FOXD1                 0.006   forkhead box D1 
PLEKHH3               0.006   pleckstrin homology domain containing, family H (wit...
LOC728767             0.006   PREDICTED: hypothetical protein 
LOC728767             0.006   PREDICTED: hypothetical protein 
NOVA2                 0.006   neuro-oncological ventral antigen 2 
LOC100293327          0.006   PREDICTED: hypothetical protein 
LOC100291252          0.006   PREDICTED: hypothetical protein XP_002347634 
LOC100287254          0.006   PREDICTED: hypothetical protein XP_002343484 
PCNXL3                0.006   pecanex-like 3 
ADAMTS19              0.006   ADAM metallopeptidase with thrombospondin type 1 mo...
CCDC64B               0.006   coiled-coil domain containing 64B 
ZBTB7C                0.006   zinc finger and BTB domain containing 7C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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