Guide to the Human Genome
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Name: CNNM2 Sequence: fasta or formatted (853aa) NCBI GI: 40068055
Description:

cyclin M2 isoform 2

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [552aa] cyclin M2 isoform 3
alt prot [875aa] cyclin M2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         54           4
 C cysteine            2.0         17           3
 D aspartate           4.7         40           2
 E glutamate           7.6         65           2
 F phenylalanine       3.4         29           2
 G glycine             7.9         67           2
 H histidine           1.9         16           1
 I isoleucine          6.3         54           3
 K lysine              5.9         50           3
 L leucine            11.5         98           4
 M methionine          2.9         25           3
 N asparagine          4.5         38           2
 P proline             4.9         42           4
 Q glutamine           3.0         26           2
 R arginine            5.2         44           3
 S serine              6.8         58           2
 T threonine           5.7         49           2
 V valine              6.2         53           3
 W tryptophan          0.6          5           1
 Y tyrosine            2.7         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin M2 isoform 2 
CNNM2                 0.993   cyclin M2 isoform 1 
CNNM2                 0.633   cyclin M2 isoform 3 
CNNM4                 0.526   cyclin M4 
CNNM1                 0.420   cyclin M1 
CNNM3                 0.304   cyclin M3 isoform 1 
CNNM3                 0.243   cyclin M3 isoform 2 
LBXCOR1               0.008   LBXCOR1 homolog 
HOXB3                 0.007   homeobox B3 
EN2                   0.007   engrailed homeobox 2 
MNX1                  0.007   homeo box HB9 
RALY                  0.006   RNA binding protein (autoantigenic, hnRNP-associated ...
RALY                  0.006   RNA binding protein (autoantigenic, hnRNP-associated...
SHANK1                0.006   SH3 and multiple ankyrin repeat domains 1 
SYNGAP1               0.005   synaptic Ras GTPase activating protein 1 
LOC100289661          0.005   PREDICTED: hypothetical protein 
LOC100289661          0.005   PREDICTED: hypothetical protein XP_002343723 
CAGE1                 0.005   cancer antigen 1 
BHLHE22               0.005   basic helix-loop-helix domain containing, class B, 5...
LOC100291691          0.005   PREDICTED: hypothetical protein XP_002345524 
LOC100294462          0.005   PREDICTED: hypothetical protein 
POU3F2                0.005   POU domain, class 3, transcription factor 2 
GRIN2D                0.005   N-methyl-D-aspartate receptor subunit 2D precursor ...
GATAD1                0.005   GATA zinc finger domain containing 1 
GRM5                  0.004   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.004   glutamate receptor, metabotropic 5 isoform b precurso...
AR                    0.004   androgen receptor isoform 1 
PCSK6                 0.004   paired basic amino acid cleaving system 4 isoform e ...
PCSK6                 0.004   paired basic amino acid cleaving system 4 isoform c ...
PCSK6                 0.004   paired basic amino acid cleaving system 4 isoform f ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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