Guide to the Human Genome
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Name: CNNM4 Sequence: fasta or formatted (775aa) NCBI GI: 94681046
Description:

cyclin M4

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         42           2
 C cysteine            1.3         10           1
 D aspartate           5.3         41           2
 E glutamate           6.6         51           2
 F phenylalanine       4.3         33           2
 G glycine             6.3         49           4
 H histidine           1.8         14           1
 I isoleucine          5.8         45           2
 K lysine              5.3         41           2
 L leucine            13.9        108           3
 M methionine          2.7         21           1
 N asparagine          4.5         35           2
 P proline             4.3         33           1
 Q glutamine           3.2         25           2
 R arginine            5.0         39           2
 S serine              7.9         61           2
 T threonine           6.1         47           3
 V valine              6.7         52           2
 W tryptophan          0.5          4           1
 Y tyrosine            3.1         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin M4 
CNNM2                 0.587   cyclin M2 isoform 2 
CNNM2                 0.582   cyclin M2 isoform 1 
CNNM1                 0.410   cyclin M1 
CNNM2                 0.339   cyclin M2 isoform 3 
CNNM3                 0.325   cyclin M3 isoform 1 
CNNM3                 0.256   cyclin M3 isoform 2 
KIAA1524              0.006   p90 autoantigen 
PER3                  0.005   period 3 
ACTBL3                0.005   PREDICTED: actin, beta-like 3 
ACTBL3                0.005   PREDICTED: actin, beta-like 3 
ACTBL3                0.005   PREDICTED: kappa-actin 
GPS1                  0.005   G protein pathway suppressor 1 isoform 2 
GPS1                  0.005   G protein pathway suppressor 1 isoform 1 
ETV7                  0.005   ets variant 7 
PYGB                  0.004   brain glycogen phosphorylase 
SLC2A12               0.004   solute carrier family 2 (facilitated glucose transpo...
IL1A                  0.003   interleukin 1, alpha proprotein 
TMEM161B              0.003   transmembrane protein 161B 
UBN1                  0.003   ubinuclein 1 
UBN1                  0.003   ubinuclein 1 
POTEE                 0.003   protein expressed in prostate, ovary, testis, and p...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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