Guide to the Human Genome
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Name: LPPR2 Sequence: fasta or formatted (343aa) NCBI GI: 12232395
Description:

lipid phosphate phosphatase-related protein type 2

Referenced in:

Lipid Metabolism
Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         39           3
 C cysteine            3.5         12           2
 D aspartate           2.6          9           1
 E glutamate           2.3          8           1
 F phenylalanine       6.1         21           2
 G glycine             7.3         25           2
 H histidine           2.3          8           1
 I isoleucine          2.9         10           2
 K lysine              1.7          6           1
 L leucine             9.9         34           2
 M methionine          0.9          3           1
 N asparagine          1.7          6           1
 P proline            10.5         36           2
 Q glutamine           1.5          5           1
 R arginine            7.9         27           2
 S serine              7.0         24           1
 T threonine           7.0         24           3
 V valine              9.6         33           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipid phosphate phosphatase-related protein type 2 [... 
PAP2D                 0.417   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
PAP2D                 0.413   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
PRG-3                 0.397   plasticity related gene 3 
PRG-3                 0.397   plasticity related gene 3 
LPPR4                 0.202   plasticity related gene 1 
PRG2                  0.173   plasticity-related protein 2 
PPAP2C                0.122   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2B                0.118   phosphatidic acid phosphatase type 2B 
PPAP2B                0.118   phosphatidic acid phosphatase type 2B 
PPAP2C                0.117   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
PPAP2C                0.112   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PPAP2A                0.100   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PPAP2A                0.096   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAPDC1A              0.038   phosphatidic acid phosphatase type 2 domain containi...
PPAPDC1B              0.031   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1B              0.015   phosphatidic acid phosphatase type 2 domain contain...
DOLPP1                0.012   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
CNNM3                 0.012   cyclin M3 isoform 2 
CNNM3                 0.012   cyclin M3 isoform 1 
HRCT1                 0.010   histidine rich carboxyl terminus 1 
SIX5                  0.010   sine oculis homeobox homolog 5 
PXK                   0.009   PX domain containing serine/threonine kinase 
LOC100291356          0.009   PREDICTED: hypothetical protein XP_002347017 
LOC100286907          0.009   PREDICTED: hypothetical protein XP_002342878 
PPAPDC3               0.007   phosphatidic acid phosphatase type 2 domain contain...
SLC40A1               0.007   solute carrier family 40 (iron-regulated transporter)...
LOC100127930          0.007   PREDICTED: hypothetical protein 
RNPS1                 0.007   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.007   RNA-binding protein S1, serine-rich domain 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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