Guide to the Human Genome
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Name: MPZL3 Sequence: fasta or formatted (235aa) NCBI GI: 38093645
Description:

myelin protein zero-like 3

Referenced in:

Oligodendrocytes and Myelin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         16           2
 C cysteine            3.0          7           1
 D aspartate           5.5         13           2
 E glutamate           5.1         12           4
 F phenylalanine       4.7         11           2
 G glycine             6.8         16           1
 H histidine           2.1          5           2
 I isoleucine          5.1         12           1
 K lysine              5.5         13           2
 L leucine             7.7         18           3
 M methionine          2.1          5           1
 N asparagine          2.1          5           1
 P proline             3.8          9           2
 Q glutamine           2.6          6           2
 R arginine            6.0         14           1
 S serine             10.2         24           3
 T threonine           7.2         17           2
 V valine              8.9         21           3
 W tryptophan          0.9          2           1
 Y tyrosine            3.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin protein zero-like 3 
MPZ                   0.176   myelin protein zero 
MPZL2                 0.154   myelin protein zero-like 2 precursor 
MPZL2                 0.154   myelin protein zero-like 2 precursor 
MPZL1                 0.145   myelin protein zero-like 1 isoform a 
MPZL1                 0.143   myelin protein zero-like 1 isoform b 
SCN2B                 0.089   sodium channel, voltage-gated, type II, beta 
SCN3B                 0.082   voltage-gated sodium channel beta-3 subunit precursor...
SCN3B                 0.082   voltage-gated sodium channel beta-3 subunit precurso...
VSIG1                 0.071   V-set and immunoglobulin domain containing 1 
IGSF11                0.067   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.067   immunoglobulin superfamily, member 11 isoform a [Hom...
AMICA1                0.056   adhesion molecule, interacts with CXADR antigen 1 i...
AMICA1                0.056   adhesion molecule, interacts with CXADR antigen 1 i...
VSIG2                 0.053   V-set and immunoglobulin domain containing 2 
GPA33                 0.049   transmembrane glycoprotein A33 precursor 
CXADR                 0.042   coxsackie virus and adenovirus receptor precursor [Ho...
ASAM                  0.038   adipocyte-specific adhesion molecule 
SCN4B                 0.033   sodium channel, voltage-gated, type IV, beta isoform...
PVRL3                 0.033   poliovirus receptor-related 3 
SCN1B                 0.027   sodium channel, voltage-gated, type I, beta isoform a...
IGSF3                 0.024   immunoglobulin superfamily, member 3 isoform 1 [Homo...
IGSF3                 0.024   immunoglobulin superfamily, member 3 isoform 2 [Homo...
SCN1B                 0.024   sodium channel, voltage-gated, type I, beta isoform ...
PVRL1                 0.024   poliovirus receptor-related 1 isoform 3 
PVRL1                 0.024   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.024   poliovirus receptor-related 1 isoform 1 
CEACAM21              0.024   carcinoembryonic antigen-related cell adhesion molec...
ICOSLG                0.022   inducible T-cell co-stimulator ligand 
CEACAM21              0.022   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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