Guide to the Human Genome
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Name: PELI3 Sequence: fasta or formatted (445aa) NCBI GI: 148612833
Description:

pellino 3 alpha isoform 2

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [469aa] pellino 3 alpha isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         37           2
 C cysteine            3.8         17           1
 D aspartate           4.5         20           1
 E glutamate           4.9         22           2
 F phenylalanine       2.2         10           1
 G glycine            10.8         48           3
 H histidine           3.8         17           2
 I isoleucine          3.1         14           1
 K lysine              2.2         10           1
 L leucine             8.8         39           2
 M methionine          1.3          6           1
 N asparagine          2.7         12           1
 P proline             7.6         34           2
 Q glutamine           4.0         18           2
 R arginine            8.1         36           3
 S serine              8.1         36           2
 T threonine           5.2         23           2
 V valine              5.8         26           2
 W tryptophan          1.8          8           1
 Y tyrosine            2.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pellino 3 alpha isoform 2 
PELI3                 0.986   pellino 3 alpha isoform 1 
PELI2                 0.669   pellino 2 
PELI1                 0.664   pellino protein 
C20orf95              0.013   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.013   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.013   PREDICTED: Rho GTPase-activating protein 18-like [H...
CSMD3                 0.008   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.008   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.008   CUB and Sushi multiple domains 3 isoform 1 
USH2A                 0.008   usherin isoform B 
ZNF703                0.008   zinc finger protein 703 
LOC339742             0.007   PREDICTED: hypothetical protein 
ANO8                  0.007   anoctamin 8 
PLD4                  0.005   phospholipase D4 
GNPTG                 0.005   N-acetylglucosamine-1-phosphotransferase, gamma subu...
SCN1B                 0.005   sodium channel, voltage-gated, type I, beta isoform ...
LOC100294450          0.004   PREDICTED: hypothetical protein 
RNF39                 0.004   ring finger protein 39 isoform 1 
RNF39                 0.004   ring finger protein 39 isoform 2 
FAM83A                0.004   hypothetical protein LOC84985 isoform b 
FAM83A                0.004   hypothetical protein LOC84985 isoform a 
LOC100170229          0.004   hypothetical protein LOC100170229 
SCARF2                0.004   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.004   scavenger receptor class F, member 2 isoform 2 [Homo...
INTS7                 0.004   integrator complex subunit 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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