LRRC56 27271

Name: LRRC56	Sequence: fasta or formatted (542aa)		NCBI GI: 39930571
Description: leucine rich repeat containing 56		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 42 3 C cysteine 1.8 10 1 D aspartate 5.0 27 2 E glutamate 6.1 33 2 F phenylalanine 0.6 3 1 G glycine 8.5 46 2 H histidine 2.6 14 1 I isoleucine 0.9 5 1 K lysine 2.2 12 2 L leucine 14.2 77 2 M methionine 0.6 3 1 N asparagine 2.4 13 2 P proline 12.5 68 2 Q glutamine 5.0 27 2 R arginine 9.2 50 2 S serine 9.0 49 3 T threonine 3.1 17 1 V valine 5.5 30 1 W tryptophan 1.7 9 1 Y tyrosine 1.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 56 LRRC61 0.030 leucine rich repeat containing 61 LRRC61 0.030 leucine rich repeat containing 61 LRRCC1 0.025 sodium channel associated protein 2 isoform a [Homo... C21orf2 0.025 hypothetical protein LOC755 DNAL1 0.024 axonemal dynein light chain 1 LRRC23 0.023 leucine rich repeat containing 23 isoform a LRRC23 0.023 leucine rich repeat containing 23 isoform a MLL2 0.020 myeloid/lymphoid or mixed-lineage leukemia 2 LRGUK 0.019 leucine-rich repeats and guanylate kinase domain con... KIAA1522 0.019 hypothetical protein LOC57648 SYNJ1 0.018 synaptojanin 1 isoform c MAPKBP1 0.018 mitogen-activated protein kinase binding protein 1 ... MAPKBP1 0.018 mitogen-activated protein kinase binding protein 1 ... SYDE1 0.018 synapse defective 1, Rho GTPase, homolog 1 PHF15 0.017 PHD finger protein 15 NLRC5 0.017 nucleotide-binding oligomerization domains 27 [Homo... LRTOMT 0.017 leucine rich transmembrane and 0-methyltransferase ... LRTOMT 0.017 leucine rich transmembrane and 0-methyltransferase d... ANP32B 0.017 acidic (leucine-rich) nuclear phosphoprotein 32 famil... LRRC47 0.017 leucine rich repeat containing 47 SAMD1 0.017 sterile alpha motif domain containing 1 FLJ22184 0.017 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 PLEKHA4 0.017 pleckstrin homology domain containing family A memb... RXFP1 0.017 relaxin/insulin-like family peptide receptor 1 [Homo... LRRCC1 0.017 sodium channel associated protein 2 isoform b [Homo... ATXN2 0.016 ataxin 2 PPP1R7 0.016 protein phosphatase 1, regulatory subunit 7 MICALL1 0.016 molecule interacting with Rab13 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.