Guide to the Human Genome
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Name: LRRC61 Sequence: fasta or formatted (259aa) NCBI GI: 13027616
Description:

leucine rich repeat containing 61

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [259aa] leucine rich repeat containing 61
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         22           2
 C cysteine            3.5          9           1
 D aspartate           4.2         11           1
 E glutamate           7.3         19           2
 F phenylalanine       1.9          5           1
 G glycine             8.5         22           2
 H histidine           0.4          1           1
 I isoleucine          1.9          5           1
 K lysine              1.5          4           1
 L leucine            18.9         49           3
 M methionine          0.4          1           1
 N asparagine          3.5          9           2
 P proline             7.3         19           2
 Q glutamine           5.4         14           1
 R arginine            6.2         16           1
 S serine             10.0         26           3
 T threonine           3.5          9           1
 V valine              3.1          8           1
 W tryptophan          2.3          6           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 61 
LRRC61                1.000   leucine rich repeat containing 61 
LRRC56                0.066   leucine rich repeat containing 56 
LRRCC1                0.058   sodium channel associated protein 2 isoform a [Homo...
NISCH                 0.048   nischarin 
LRRC47                0.044   leucine rich repeat containing 47 
CEP110                0.044   centrosomal protein 110kDa 
C21orf2               0.042   hypothetical protein LOC755 
LRGUK                 0.042   leucine-rich repeats and guanylate kinase domain con...
LRRC58                0.042   leucine rich repeat containing 58 
SNRPA1                0.040   small nuclear ribonucleoprotein polypeptide A' [Homo...
PPP1R7                0.040   protein phosphatase 1, regulatory subunit 7 
LRCH4                 0.038   leucine-rich repeats and calponin homology (CH) doma...
ANP32B                0.038   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
LRRC6                 0.036   leucine rich repeat containing 6 
MFHAS1                0.034   malignant fibrous histiocytoma amplified sequence 1...
LRRC48                0.034   leucine rich repeat containing 48 isoform b 
LRRC48                0.034   leucine rich repeat containing 48 isoform b 
LRRC48                0.034   leucine rich repeat containing 48 isoform a 
LRRC48                0.034   leucine rich repeat containing 48 isoform a 
LRRC49                0.034   leucine rich repeat containing 49 
LRRC26                0.034   leucine rich repeat containing 26 
LRRC28                0.034   leucine rich repeat containing 28 
CEP97                 0.034   centrosomal protein 97kDa 
LOC401387             0.032   leucine-rich repeat and death domain-containing pro...
ANP32A                0.032   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ERBB2IP               0.032   ERBB2 interacting protein isoform 7 
ERBB2IP               0.032   ERBB2 interacting protein isoform 2 
ANP32E                0.030   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
LRRIQ1                0.030   leucine-rich repeats and IQ motif containing 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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