NLRC5 1764

Name: NLRC5	Sequence: fasta or formatted (1866aa)		NCBI GI: 116268109
Description: nucleotide-binding oligomerization domains 27		Referenced in: Pyrin and Associated Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 141 3 C cysteine 3.9 73 2 D aspartate 4.4 82 3 E glutamate 6.1 114 4 F phenylalanine 3.2 60 2 G glycine 6.4 119 2 H histidine 3.6 67 2 I isoleucine 2.4 45 1 K lysine 3.4 63 2 L leucine 18.5 346 3 M methionine 1.6 30 1 N asparagine 2.7 51 2 P proline 5.4 100 2 Q glutamine 6.3 118 3 R arginine 5.1 95 2 S serine 8.4 156 2 T threonine 4.7 88 2 V valine 4.8 90 2 W tryptophan 0.8 15 1 Y tyrosine 0.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleotide-binding oligomerization domains 27 [Homo... NLRC3 0.040 NOD3 protein NOD2 0.031 nucleotide-binding oligomerization domain containing... NOD1 0.029 nucleotide-binding oligomerization domain containing ... CIITA 0.029 class II transactivator NLRP12 0.028 NLR family, pyrin domain containing 12 isoform 2 [Ho... NLRP3 0.021 NLR family, pyrin domain containing 3 isoform a [Ho... NLRP3 0.021 NLR family, pyrin domain containing 3 isoform a [Hom... NLRP5 0.021 NACHT, LRR and PYD containing protein 5 NLRP3 0.019 NLR family, pyrin domain containing 3 isoform c [Ho... NLRP3 0.019 NLR family, pyrin domain containing 3 isoform d [Ho... NLRP14 0.019 NLR family, pyrin domain containing 14 NLRP3 0.018 NLR family, pyrin domain containing 3 isoform b [Hom... NLRP10 0.018 NLR family, pyrin domain containing 10 NLRP1 0.018 NLR family, pyrin domain containing 1 isoform 2 [Homo... NLRP1 0.018 NLR family, pyrin domain containing 1 isoform 4 [Hom... NLRP1 0.018 NLR family, pyrin domain containing 1 isoform 5 [Hom... NLRP1 0.018 NLR family, pyrin domain containing 1 isoform 3 [Hom... NLRP1 0.018 NLR family, pyrin domain containing 1 isoform 1 [Hom... RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor RNH1 0.018 ribonuclease/angiogenin inhibitor C14orf166B 0.017 hypothetical protein LOC145497 NFKBIL2 0.016 NF-kappa-B inhibitor-like protein 2 NLRP2 0.016 NLR family, pyrin domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.