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Search of human proteins with 39780588
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39780588 TSR1, 20S rRNA accumulation [Homo sapiens]
(804 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39780588 TSR1, 20S rRNA accumulation [Homo sapiens] 1632 0.0
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 111 3e-24
gi|239758065 PREDICTED: similar to BMS1-like, ribosome assembly ... 67 5e-11
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 47 7e-05
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 47 7e-05
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 47 7e-05
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 47 7e-05
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 47 7e-05
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 47 7e-05
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 47 7e-05
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 47 9e-05
gi|22749303 hypothetical protein LOC196477 [Homo sapiens] 42 0.002
gi|221219020 NYD-SP11 protein [Homo sapiens] 42 0.002
gi|157738619 smoothelin-like 1 [Homo sapiens] 41 0.004
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 41 0.005
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 40 0.007
gi|145580615 KRI1 homolog [Homo sapiens] 40 0.007
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 40 0.007
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 40 0.007
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 40 0.007
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 40 0.007
gi|17975763 myelin transcription factor 1 [Homo sapiens] 40 0.009
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 40 0.011
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 40 0.011
gi|21361639 DIPB protein [Homo sapiens] 40 0.011
gi|223890205 mouse double minute 2 homolog isoform MDM2h [Homo s... 39 0.015
gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo s... 39 0.015
gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo sap... 39 0.015
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 39 0.015
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 39 0.015
>gi|39780588 TSR1, 20S rRNA accumulation [Homo sapiens]
Length = 804
Score = 1632 bits (4227), Expect = 0.0
Identities = 804/804 (100%), Positives = 804/804 (100%)
Query: 1 MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQL 60
MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQL
Sbjct: 1 MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQL 60
Query: 61 RKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDRDTGTVHLNELGNTQ 120
RKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDRDTGTVHLNELGNTQ
Sbjct: 61 RKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDRDTGTVHLNELGNTQ 120
Query: 121 NFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQ 180
NFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQ
Sbjct: 121 NFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQ 180
Query: 181 GLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHDKLLLLDTQQEAGMLLRQLANQK 240
GLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHDKLLLLDTQQEAGMLLRQLANQK
Sbjct: 181 GLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHDKLLLLDTQQEAGMLLRQLANQK 240
Query: 241 QQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVGYGDFQMK 300
QQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVGYGDFQMK
Sbjct: 241 QQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVGYGDFQMK 300
Query: 301 QIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVI 360
QIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVI
Sbjct: 301 QIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVI 360
Query: 361 PDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYE 420
PDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYE
Sbjct: 361 PDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYE 420
Query: 421 YDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERL 480
YDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERL
Sbjct: 421 YDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERL 480
Query: 481 EEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSI 540
EEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSI
Sbjct: 481 EEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSI 540
Query: 541 FKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRR 600
FKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRR
Sbjct: 541 FKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRR 600
Query: 601 DPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITF 660
DPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITF
Sbjct: 601 DPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITF 660
Query: 661 PPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNR 720
PPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNR
Sbjct: 661 PPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNR 720
Query: 721 EDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYD 780
EDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYD
Sbjct: 721 EDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYD 780
Query: 781 PYVPEPVPWLKSEISSTVPQGGME 804
PYVPEPVPWLKSEISSTVPQGGME
Sbjct: 781 PYVPEPVPWLKSEISSTVPQGGME 804
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 111 bits (277), Expect = 3e-24
Identities = 85/350 (24%), Positives = 166/350 (47%), Gaps = 10/350 (2%)
Query: 440 EEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIR 499
++++ + + E ++ D D + + + K + E +E+ +E+D + +A+ +
Sbjct: 765 DDKDAAKVLAEDEELYGDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKK 824
Query: 500 -FQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEK---EVEGAEVG 555
K R LK + +D E+ D + + Q ++ F++ +++ + EG G
Sbjct: 825 HLDKKRKLKEMFDAEYDEGESTYFDDLK-GEMQKQAQLNRAEFEDQDDEARVQYEGFRPG 883
Query: 556 WYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELI 615
YV + + VP V+ F P+I L E + + M +++ + +K+++ +I
Sbjct: 884 MYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPII 943
Query: 616 FHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGM 675
F G+RRF+ PL+ + +L ++ M A + PIT P + L Q +G+
Sbjct: 944 FSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPIT-PQGTGFLAIQSVSGI 1002
Query: 676 ---HSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELR 732
+ ATG ++ +D ++K++ L+G P+KIF + ++ MF + +V F+ +R
Sbjct: 1003 MPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIR 1062
Query: 733 TKWGRRGHIKEPL-GTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDP 781
T G RG IK+ L G + SF+ KL D V M + V Y+P
Sbjct: 1063 TVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNP 1112
Score = 69.7 bits (169), Expect = 1e-11
Identities = 96/403 (23%), Positives = 156/403 (38%), Gaps = 54/403 (13%)
Query: 142 DLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQI 201
D+++++D+AKVAD +L L+D G++ L+ G P + + KQ+
Sbjct: 136 DINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIMGVLTHLDSFKHNKQL 195
Query: 202 DTRKKLSKAVEKRF-----PHDKLLLLD-------TQQEAGMLLRQLANQKQQHLAFRDR 249
KK K ++ RF P KL L QE L R + K + L ++
Sbjct: 196 ---KKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFITVMKFRPLTWQTS 252
Query: 250 RAYLFAHAVDFVPSEEN---NLVGTLKIS--GYVRGQTLNVNRLLHIVGYGDFQMKQIDA 304
Y+ A ++ + + E+ N+ K+S GY+RG L +H+ G GDF + I
Sbjct: 253 HPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMPGVGDFAVSDISF 312
Query: 305 PGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIP--- 361
DP L + K + + V + K + D G Q EV P
Sbjct: 313 LPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYD-KDAVYVDLGGSHVFQDEVGPTHE 371
Query: 362 ---------DPMEGEQTWPTEEELSEAKDFLKES--------SKVVKKVPKGTSSYQAEW 404
++ + S++K E K K++ T + +
Sbjct: 372 LVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQMDLNTGRMRRKA 431
Query: 405 ILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVD 464
I G G+ D+ E D+M +D +E S DE +EEEE E MT + +K++
Sbjct: 432 IF-GDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAE-MTDQYMAVKGIKRRKLE 489
Query: 465 EEAEAKM-----------LEKYKQERLEEMFPDEVDTPRDVAA 496
E +++M LE+ E E DE D A
Sbjct: 490 LEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTA 532
>gi|239758065 PREDICTED: similar to BMS1-like, ribosome assembly
protein [Homo sapiens]
Length = 331
Score = 67.4 bits (163), Expect = 5e-11
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 550 EGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVK 609
EG G YV + + VP V+ F P+I L E + + M +++ + +K
Sbjct: 54 EGFRPGVYVRVEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGDVQMHLKKHRWYKKILK 113
Query: 610 AKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFK 669
+++ +IF G+RRF+ PL+ + +L ++ M A + P+T P + L
Sbjct: 114 SRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWDPVT-PQGTGFLAI 172
Query: 670 QKSNGM---HSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRY 715
Q +G+ + ATG ++ +D ++K++ +G P+KIF + ++Y
Sbjct: 173 QSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKPTGFPYKIFKNTSFIKY 221
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 234 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 289
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 290 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 339
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 244 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 299
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 300 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 349
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 235 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 290
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 291 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 340
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 244 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 299
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 300 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 349
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 212 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 267
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 268 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 317
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 201 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 256
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 257 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 306
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 47.0 bits (110), Expect = 7e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 366 GEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDME 425
G+ P +EE E +D L + + K +S+ + S SG E +E E ++ E
Sbjct: 246 GDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEE 301
Query: 426 HEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
E EES++E EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 302 EEGSTSEESEEEEEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 351
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 46.6 bits (109), Expect = 9e-05
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 365 EGEQTWPTEEELSEAKDFLKES-SKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDD 423
EGE E E K E+ S+ + G + + + DGG GG+ +E E ++
Sbjct: 807 EGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEE 866
Query: 424 MEHEDFMEEESQDESSEEEEEYE 446
E E+ EEE Q+E EEEEE E
Sbjct: 867 EEQEEEEEEEEQEEEEEEEEEEE 889
Score = 30.0 bits (66), Expect = 8.9
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Query: 346 KADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWI 405
K +PG QE + M GE+ E +E K S + +G + Q +
Sbjct: 738 KENPGGQEDVAEAESTGEMPGEEGETAGEGETEEK-----SGGETQPEGEGETETQGKGE 792
Query: 406 -LDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHD-------- 456
+ +++ G+GD D+ E E +E E +E GE+ +D
Sbjct: 793 ECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGG 852
Query: 457 --DLYDKKVDEEAEAKMLEKYKQERLEEMFPDE 487
D D + +EE E + E+ ++E EE +E
Sbjct: 853 GSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEE 885
>gi|22749303 hypothetical protein LOC196477 [Homo sapiens]
Length = 406
Score = 42.4 bits (98), Expect = 0.002
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 332 DAVDDMEEGLK-----VLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKES 386
+ V+ +E L+ V +A P R A P ++TW +E L F++
Sbjct: 205 EKVERQQEALRAQKATVSGEASPARSSGNDAP----PGGSKETWGLQETLY---GFVQNP 257
Query: 387 SKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYD------DMEHEDFMEEESQDESSE 440
S P+ S + + + + +EY+ + E E+ +E+E ++ E
Sbjct: 258 SLAFSPNPEENQSLAPLLVEEEEEKKNDDEEEYDQEVCDAKEASEEEEEVEDEEEEVEDE 317
Query: 441 EEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRF 500
EEEE E E ++L +++++EE E +LE+ +Q E P E+ V A +
Sbjct: 318 EEEEVEEAEYVEEGEEELEEEELEEEEE--VLEENEQRGEEFHLPLEMPLSIFVEAEEKR 375
Query: 501 QKYRGLKSFRTSPWDPKENLPQDYARIFQFQNF 533
+ + PK +PQ+ +F Q+F
Sbjct: 376 ENFISCTFLNPEQIIPK--VPQE--SLFMAQDF 404
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 364 MEGEQTWPTEEELSEAKDFLKE---SSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYE 420
++ E+ EEE E FLK K K+ K + ++ + E E
Sbjct: 2176 LDDEEEGGIEEE--EVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESL 2233
Query: 421 YDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQER 479
D++E ++ + E ++E EEEE E E V ++ ++K +EE E K +EK ++E+
Sbjct: 2234 LDELEKQESLSSEEEEEREEEEEREE-----EEVREEEEERKEEEEGEEKQVEKEEEEK 2287
Score = 34.3 bits (77), Expect = 0.47
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 334 VDDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEA-KDFLKESSKVVKK 392
+DD EEG G +E EVIP ++ W +E K K SS+V +
Sbjct: 2176 LDDEEEG---------GIEEE---EVIPFL---KRRWRKRKEAKRGDKPKEKFSSQVDEV 2220
Query: 393 VPKGTSSYQAEWILDG-----GSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYET 447
+ S + E +LD S E + E ++ E E+ EEE E +EEEE E
Sbjct: 2221 ESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEE---EERKEEEEGEE 2277
Query: 448 MTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRD 493
+ + + KK ++ E + E+ +E+ E M +E ++ D
Sbjct: 2278 KQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSD 2323
Score = 33.1 bits (74), Expect = 1.1
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 374 EELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEE 433
+E+ + F +E ++ ++ K S E + + E +E E + E E EEE
Sbjct: 2218 DEVESEEHFSEEMESLLDELEKQESLSSEE---EEEREEEEEREEEEVREEEEERKEEEE 2274
Query: 434 SQDESSEEEEEYETMTIGESVHDDLYDK--------KVDEEAEAKMLEKYKQERLEEMFP 485
+++ E+EEE + E +++ +K ++ E E + L ++E
Sbjct: 2275 GEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLE 2334
Query: 486 DEVDTPRDV 494
+EVD +++
Sbjct: 2335 EEVDREKEI 2343
Score = 31.2 bits (69), Expect = 4.0
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 423 DMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEE 482
D++ DF E+ S+ E++ + + + + ++ E E+K+ K+ + L+
Sbjct: 2119 DIKEWDFSEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILD- 2177
Query: 483 MFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWD-PKENLPQDYARIFQFQNFTNTRKSIF 541
DE + + I F K R K D PKE + ++F+ +S+
Sbjct: 2178 ---DEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLL 2234
Query: 542 KEVEEKEVEGAE 553
E+E++E +E
Sbjct: 2235 DELEKQESLSSE 2246
Score = 30.8 bits (68), Expect = 5.2
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 375 ELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQS-GGEGDEYEYDDMEHEDFMEEE 433
+L+E K+ L + V+++P Q E LD + E +E E+D ME + EEE
Sbjct: 1685 KLAEVKNILAQK---VEELP------QREQNLDWQEKELAQELEELEWD-MEELSWKEEE 1734
Query: 434 SQDESSEEEEEYETMTIGESV----HDDLYDK--KVDEEAEAKMLEKYKQERLEEMFPDE 487
E + EE + + E + L ++ K+ +E E + EK K + +E P+E
Sbjct: 1735 LNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEE 1794
Query: 488 VDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEE 546
+ ++ +K L R + E L ++ ++Q +N +K++ +E E+
Sbjct: 1795 EERLGRKREQL-IEKKMKLAQKRERWINSMEELTKNKMILYQKKNLAQEKKNLAQEKEK 1852
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 41.2 bits (95), Expect = 0.004
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Query: 341 LKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLK-ESSKVVKKVPKGTSS 399
+KV + + G +E +AE+ + E E+T +E++ K+ K E + +K S
Sbjct: 94 VKVESQREAGGKEDAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASE 153
Query: 400 YQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLY 459
Q + +SG + D + D E + +EEE +S+EE + +
Sbjct: 154 KQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQR-----KECSTEPK 208
Query: 460 DKKVDEEAEAKMLEKYKQE--RLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPK 517
+K DEEA+A+ + ++ + E PD + + A K + P P
Sbjct: 209 EKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEEADAKEEAEDAEEAEPGSPS 268
Query: 518 ENLPQD 523
E QD
Sbjct: 269 EEQEQD 274
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 40.8 bits (94), Expect = 0.005
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 414 GEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLE 473
GE +E++ +D E ED +E DE SEEEEE+ E +D +EE E E
Sbjct: 185 GEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDED------EEEEEGGKGE 238
Query: 474 KYKQERLEE 482
K K+E +E
Sbjct: 239 KRKRETDDE 247
Score = 37.4 bits (85), Expect = 0.056
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 415 EGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEK 474
+G + E +D E ED EE+ DE EEEE E E V D D +V EE E L++
Sbjct: 163 DGVDEEEEDEEGED--EEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDE 220
Query: 475 YKQERLEEMFPDE 487
++ E+ +E
Sbjct: 221 EDEDEDEDEEEEE 233
Score = 33.5 bits (75), Expect = 0.81
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 413 GGEGDEYEYDDMEHE-DFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKM 471
G + ++ E D + E D ++EE +DE E+EE+ + E D+ D+ DE+ E
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDE--DEDVEGDE 204
Query: 472 LEKYKQERLEEMFPDEVDTPRD 493
+ E EE DE D D
Sbjct: 205 DDDEVSEEEEEFGLDEEDEDED 226
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 40.4 bits (93), Expect = 0.007
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 412 SGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKM 471
S E +E E ++ E E+ EEE +D EEE+E E E ++ ++ +EE E +
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE 944
Query: 472 LEKYKQERLEEMFPDEVD 489
E+ + E EE + D
Sbjct: 945 EEEEEDEEEEEELEEVED 962
Score = 37.4 bits (85), Expect = 0.056
Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 412 SGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKM 471
+ + +E E ++ E E+ EEE +++ EEEE+ E E ++ ++++ +EE E ++
Sbjct: 884 NSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEE-EGEL 942
Query: 472 LEKYKQERLEE 482
E+ ++E EE
Sbjct: 943 EEEEEEEDEEE 953
Score = 36.2 bits (82), Expect = 0.12
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 321 DPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEE--ELSE 378
D ++++E + D+V + EGL L P P EE EL
Sbjct: 775 DVEISLESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPA 834
Query: 379 AKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYD----DMEHEDFMEEES 434
A L VP G + ++ G+ GG E D ++ D EEE
Sbjct: 835 APGPLPPPPPPPPPVP-GPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSD--EEEE 891
Query: 435 QDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDE 487
++E EEEEE E E +D +++ DEE E E+ ++E EE F +E
Sbjct: 892 EEEEEEEEEEEE-----EEEEEDFEEEEEDEE-EYFEEEEEEEEEFEEEFEEE 938
Score = 32.7 bits (73), Expect = 1.4
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 361 PDPMEGEQTWPTEEELSEAKD------FLKESSKVVKKVPKGTSSYQAEWILDGGSQSGG 414
P P+ G T P + + E L+E V+ + E + +
Sbjct: 846 PPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEE 905
Query: 415 EGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAE 468
E +++E ++ + E++ EEE ++E E EEE+E ++ D++ +EE E
Sbjct: 906 EEEDFEEEEEDEEEYFEEE-EEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELE 958
>gi|145580615 KRI1 homolog [Homo sapiens]
Length = 709
Score = 40.4 bits (93), Expect = 0.007
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 39/227 (17%)
Query: 338 EEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGT 397
E G +L K RQE Q E D +E W ++ D LKE + +
Sbjct: 185 EGGSSLLQKRAKTRQEKAQEEA--DYIE----WLKGQKEIRNPDSLKELTHL-------- 230
Query: 398 SSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDD 457
Y + LD EG+ + D + ++ + EEE ++E EE EE E VH
Sbjct: 231 KEYWNDPELD-------EGERFLRDYILNKRYEEEEEEEEDEEEMEE------EEGVHGP 277
Query: 458 LYDKKVDEEAEAKMLEKYKQERLEEMF------PDEVDT---PRDVAARIRFQKYRGLKS 508
VD+ ++ L KQE E+ + PD PR +A+ +R + R +
Sbjct: 278 PVQLAVDDSSDEGELFLKKQEDFEQKYNFRFEEPDSASVKTYPRSIASSVRRKDERRKEK 337
Query: 509 FRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEE-KEVEGAEV 554
+ K + + Q +N RK I ++E+ ++V G E+
Sbjct: 338 REETRERKKREKAKKQEELKQLKNL--KRKEILAKLEKLRKVTGNEM 382
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 40.4 bits (93), Expect = 0.007
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 378 EAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDE 437
E +D L + + K +S+ + S SG E +E E ++ E E EES++E
Sbjct: 2 EERDLLSDLQDISDSERKTSSAESSS----AESGSGSEEEEEEEEEEEEEGSTSEESEEE 57
Query: 438 SSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQE 478
EEEEE E S ++ ++ +E +E +M E ++E
Sbjct: 58 EEEEEEEEEET---GSNSEEASEQSAEEVSEEEMSEDEERE 95
Score = 31.2 bits (69), Expect = 4.0
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 434 SQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEV 488
S++E EEEEE E + E ++ +++ +EE E+ ++ EE+ +E+
Sbjct: 34 SEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEM 88
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 40.4 bits (93), Expect = 0.007
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 360 IPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEY 419
+P P+ G++ EE+ +D+ + S VP+ Y E ++ Q GE DE
Sbjct: 199 VPLPVSGDK----EEDAPHREDYFEPISPDRNSVPQ-EGQYSDEGEVEEEQQEEGEEDED 253
Query: 420 EYDDMEHEDFMEEE-----SQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEK 474
+ D E ED E++ S E EE+EE E E DD Y++ +E LE+
Sbjct: 254 DVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLER 313
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 40.4 bits (93), Expect = 0.007
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 360 IPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEY 419
+P P+ G++ EE+ +D+ + S VP+ Y E ++ Q GE DE
Sbjct: 199 VPLPVSGDK----EEDAPHREDYFEPISPDRNSVPQ-EGQYSDEGEVEEEQQEEGEEDED 253
Query: 420 EYDDMEHEDFMEEE-----SQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEK 474
+ D E ED E++ S E EE+EE E E DD Y++ +E LE+
Sbjct: 254 DVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLER 313
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 40.4 bits (93), Expect = 0.007
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 320 KDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEA 379
K+ +ME+CA AV+ ME+G+ P ++E+ P P+E E+ TE+
Sbjct: 461 KEVSESMELCA--AVEVMEQGV-------PEKEET------PPPVEPEEEEDTEDA---- 501
Query: 380 KDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESS 439
G ++A + + G E + E+ EEE ++E
Sbjct: 502 ----------------GLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDE 545
Query: 440 EEEEEYETMTIGESVHDDLYDKKV-DEEAEAKMLEK 474
E EEE E E D D+KV DE+ K L+K
Sbjct: 546 ESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDK 581
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 40.0 bits (92), Expect = 0.009
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 337 MEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKG 396
+EE L K PG LQ + EG + E+ L + ++ +VV+ +
Sbjct: 180 VEEDLGQAAKPGPGIVHLLQ-----EAAEGAASEEGEKGLFIQPE---DAEEVVEVTTER 231
Query: 397 TSSYQAEWILDGGSQSGGEGD---EYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGES 453
+ + + D S+ + +E +D E E+ EEE +DE EEEEE E
Sbjct: 232 SQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEE------- 284
Query: 454 VHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEV 488
++ +EE E + E+ ++E EE PD +
Sbjct: 285 -------EEEEEEEEEEEEEEEEEEEEEEAAPDVI 312
Score = 38.1 bits (87), Expect = 0.033
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 361 PDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYE 420
P+ E TE L++++ KG S++ E D + E +E +
Sbjct: 218 PEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEE---DEEEEEEEEEEEED 274
Query: 421 YDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLE 473
++ E E+ EEE ++E EEEEE E E+ D ++ + + K E
Sbjct: 275 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPE 327
Score = 30.0 bits (66), Expect = 8.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 427 EDFMEEES---------QDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQ 477
ED EES ++E EEEEE E E ++ +++ +EE E + E+ ++
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Query: 478 ERLEEMFPDEVDTPRDVA 495
E EE +V D +
Sbjct: 301 EEEEEEAAPDVIFQEDTS 318
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 39.7 bits (91), Expect = 0.011
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Query: 415 EGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEK 474
E +E E ++ E E+ +EE ++E EEEE+ E +K+ DEE E K +K
Sbjct: 119 EEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEE-------------EKEEDEEEEEKEGKK 165
Query: 475 YKQERLEEMFPDEV 488
++E++EE E+
Sbjct: 166 MEEEKVEEEIDTEI 179
Score = 35.0 bits (79), Expect = 0.28
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 415 EGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAE 468
E +E E ++ + ED EEE ++E E+EEE E G+ + ++ ++++D E +
Sbjct: 129 EVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKE--GKKMEEEKVEEEIDTEIQ 180
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 39.7 bits (91), Expect = 0.011
Identities = 37/190 (19%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 367 EQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEH 426
E+ W +E L E ++ ++E K+ ++ K + + Q D+ E M
Sbjct: 507 ERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQ------EQEKKTWDQEE--KMRE 558
Query: 427 EDFMEEESQDESSEEE---EEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEM 483
E+ M E + EEE E+ E M E + +K ++E + + E+ E+ E+M
Sbjct: 559 EERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKM 618
Query: 484 FPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKE 543
+ E + + +++ ++ W+ +E + + ++ + + ++ +E
Sbjct: 619 WEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMRE 678
Query: 544 VEEKEVEGAE 553
EEK ++G E
Sbjct: 679 QEEK-MQGQE 687
Score = 30.4 bits (67), Expect = 6.8
Identities = 29/157 (18%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 351 RQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGS 410
++E +Q + + E+ W EE++ E ++ + E + + + + + E ++
Sbjct: 579 QEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQE 638
Query: 411 QSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAK 470
+ E +E ++ E EE+ +++ + + + E M E +K ++E + +
Sbjct: 639 EKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMR 698
Query: 471 MLEKYKQERLEEMFPDE-----VDTPRDVAARIRFQK 502
E+ + E+M+ E + R+ RIR QK
Sbjct: 699 GQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIRDQK 735
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 39.7 bits (91), Expect = 0.011
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 410 SQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEA 469
S++G E + E + E E EEES+DES EE EE E + D+ + ++ E
Sbjct: 93 SEAGEESESEEESESEEESETEEESEDESDEESEEDSE----EEMEDEQESEAEEDNQEE 148
Query: 470 KMLEKYKQERLEEMFPDEVDTPRDVAAR 497
E + E F E++ + A+
Sbjct: 149 GESEAEGETEAESEFDPEIEMEAERVAK 176
Score = 32.3 bits (72), Expect = 1.8
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 56/263 (21%)
Query: 347 ADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 406
A+ RQ+ L + + + G Q W + A KE ++V + + S E
Sbjct: 45 AEAHRQKFLSHH-LAEYVHGSQAWTPPADGEGAG---KEEAEVKVEQEREIESEAGE--- 97
Query: 407 DGGSQSGGEGDEYEYDDMEHEDFMEEESQD---ESSEEE----------EEYETMTIGES 453
+ S+ E +E + E ED +EES++ E E+E EE E+ GE+
Sbjct: 98 ESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGET 157
Query: 454 VHDDLYDKKVDEEAE--AKM--------LEKYKQERLEEMF----------PDEVDTPRD 493
+ +D +++ EAE AK L Y QE + + ++ T +
Sbjct: 158 EAESEFDPEIEMEAERVAKRKCPDHGLDLSTYCQEDRQLICVLCPVIGAHQGHQLSTLDE 217
Query: 494 VAARIRFQKYRGLKS----------FRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKE 543
+R + GLK+ F++S DPK + +D ++F Q F +K I E
Sbjct: 218 AFEELRSKDSGGLKAAMIELVERLKFKSS--DPK--VTRDQMKMFIQQEFKKVQKVIADE 273
Query: 544 VEEKEVEGAEV-GWYVTLHVSEV 565
E+K + ++ T HV+E+
Sbjct: 274 -EQKALHLVDIQEAMATAHVTEI 295
>gi|223890205 mouse double minute 2 homolog isoform MDM2h [Homo
sapiens]
Length = 442
Score = 39.3 bits (90), Expect = 0.015
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 396 GTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVH 455
G S + +W LD S S E+E + ++ ED+ E E S+E++E +T+ ++
Sbjct: 178 GVSEHSGDW-LDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQVTVYQAGE 236
Query: 456 DDLYDKKVDEEAEAKMLEKYKQERLEEMFP 485
D +E+ E + + +K EM P
Sbjct: 237 SD--TDSFEEDPEISLADYWKCTSCNEMNP 264
>gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo
sapiens]
Length = 452
Score = 39.3 bits (90), Expect = 0.015
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 396 GTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVH 455
G S + +W LD S S E+E + ++ ED+ E E S+E++E +T+ ++
Sbjct: 188 GVSEHSGDW-LDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQVTVYQAGE 246
Query: 456 DDLYDKKVDEEAEAKMLEKYKQERLEEMFP 485
D +E+ E + + +K EM P
Sbjct: 247 SD--TDSFEEDPEISLADYWKCTSCNEMNP 274
>gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo
sapiens]
Length = 497
Score = 39.3 bits (90), Expect = 0.015
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 396 GTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVH 455
G S + +W LD S S E+E + ++ ED+ E E S+E++E +T+ ++
Sbjct: 233 GVSEHSGDW-LDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQVTVYQAGE 291
Query: 456 DDLYDKKVDEEAEAKMLEKYKQERLEEMFP 485
D +E+ E + + +K EM P
Sbjct: 292 SD--TDSFEEDPEISLADYWKCTSCNEMNP 319
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 39.3 bits (90), Expect = 0.015
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 330 ATDAVDDM-EEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSE---AKDFLKE 385
A ++ DD+ +E + + ++ + E D E + +E E E KD +E
Sbjct: 518 AKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEE 577
Query: 386 SSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEH---EDFMEEESQDESSEEE 442
S+ K++ + + E ++ E E+E D E E+ E E ++S E+E
Sbjct: 578 GSE--KELHENVLDKELE-------ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKE 628
Query: 443 EEYETMTIGESVHDDLYDKKVDEE-AEAKMLE----KYKQERLEEMFPDEVDTPRD 493
EE +T E V DD D+K DEE A+ K LE K ++ +E +E D D
Sbjct: 629 EEEDTY---EKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKED 681
Score = 32.7 bits (73), Expect = 1.4
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 336 DMEEGLKVL-MKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVP 394
+ EEG V + D ++ES + + D E +E++L+ KES + V
Sbjct: 484 ESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLN------KESEEEVGPTK 537
Query: 395 KGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFME---EESQDESSEEEEEYETMTIG 451
+ D +S + E + +D +F E E+ DE E+E +E +
Sbjct: 538 ESEED-------DSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDK 590
Query: 452 ESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARI 498
E +D + + +++ K+L++ ER + DE + D ++
Sbjct: 591 ELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKV 637
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 39.3 bits (90), Expect = 0.015
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 330 ATDAVDDM-EEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSE---AKDFLKE 385
A ++ DD+ +E + + ++ + E D E + +E E E KD +E
Sbjct: 518 AKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEE 577
Query: 386 SSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEH---EDFMEEESQDESSEEE 442
S+ K++ + + E ++ E E+E D E E+ E E ++S E+E
Sbjct: 578 GSE--KELHENVLDKELE-------ENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKE 628
Query: 443 EEYETMTIGESVHDDLYDKKVDEE-AEAKMLE----KYKQERLEEMFPDEVDTPRD 493
EE +T E V DD D+K DEE A+ K LE K ++ +E +E D D
Sbjct: 629 EEEDTY---EKVFDDESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKED 681
Score = 32.7 bits (73), Expect = 1.4
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 336 DMEEGLKVL-MKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVP 394
+ EEG V + D ++ES + + D E +E++L+ KES + V
Sbjct: 484 ESEEGNPVRGSEEDSPKKESKKKTLKNDCEENGLAKESEDDLN------KESEEEVGPTK 537
Query: 395 KGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFME---EESQDESSEEEEEYETMTIG 451
+ D +S + E + +D +F E E+ DE E+E +E +
Sbjct: 538 ESEED-------DSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDK 590
Query: 452 ESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARI 498
E +D + + +++ K+L++ ER + DE + D ++
Sbjct: 591 ELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKV 637
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,709,848
Number of Sequences: 37866
Number of extensions: 1554931
Number of successful extensions: 11128
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 7883
Number of HSP's gapped (non-prelim): 1582
length of query: 804
length of database: 18,247,518
effective HSP length: 110
effective length of query: 694
effective length of database: 14,082,258
effective search space: 9773087052
effective search space used: 9773087052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.