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Search of human proteins with 38788319
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
(607 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 1241 0.0
gi|223029424 large subunit GTPase 1 [Homo sapiens] 172 6e-43
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 80 4e-15
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 65 1e-10
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 51 4e-06
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 51 4e-06
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 51 4e-06
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 44 6e-04
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 44 6e-04
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 44 6e-04
gi|24307899 Era-like 1 [Homo sapiens] 43 0.001
gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens] 42 0.001
gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens] 42 0.001
gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens] 42 0.001
gi|7657455 pescadillo homolog 1, containing BRCT domain [Homo sa... 42 0.002
gi|21361639 DIPB protein [Homo sapiens] 42 0.002
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 42 0.002
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 42 0.002
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 41 0.003
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 41 0.003
gi|56711320 hypothetical protein LOC145407 [Homo sapiens] 41 0.003
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 41 0.004
gi|17975763 myelin transcription factor 1 [Homo sapiens] 41 0.004
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 40 0.008
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 39 0.011
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 39 0.011
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 39 0.011
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 39 0.011
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.011
gi|38176300 nestin [Homo sapiens] 39 0.014
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 1241 bits (3212), Expect = 0.0
Identities = 607/607 (100%), Positives = 607/607 (100%)
Query: 1 MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI 60
MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI
Sbjct: 1 MPRKKPFSVKQKKKQLQDKRERKRGLQDGLRSSSNSRSGSRERREEQTDTSDGESVTHHI 60
Query: 61 RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV 120
RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV
Sbjct: 61 RRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIREV 120
Query: 121 YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ 180
YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ
Sbjct: 121 YQPGSVLDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKLSYFEHNLETWRQ 180
Query: 181 LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH 240
LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH
Sbjct: 181 LWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLALVLVLNKVDLAPPALVVAWKH 240
Query: 241 YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG 300
YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG
Sbjct: 241 YFHQHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRACEAITVG 300
Query: 301 KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV 360
KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV
Sbjct: 301 KVDLSSWREKIARDVAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDGV 360
Query: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL
Sbjct: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
Query: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE
Sbjct: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
Query: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV
Sbjct: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
Query: 541 VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA 600
VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA
Sbjct: 541 VLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYA 600
Query: 601 LLGEDEC 607
LLGEDEC
Sbjct: 601 LLGEDEC 607
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 172 bits (437), Expect = 6e-43
Identities = 137/448 (30%), Positives = 212/448 (47%), Gaps = 58/448 (12%)
Query: 127 LDFPRRPPWSYEMSKEQLMSQEERSFQDYLGKIHGAYSSEKL--SYFEHNLETWRQLWRV 184
L PRRP W+ + E+L E+ +F ++ ++ +KL + FE NL+ WRQLWRV
Sbjct: 111 LCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRV 170
Query: 185 LEMSDIVLLITDIRHPVVNFPPALYEYVTG-ELGLALVLVLNKVDLAPPALVVAWKHYFH 243
+E SDIV+ I D R+P++ L YV + V+++NK DL AW YF
Sbjct: 171 IERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFE 230
Query: 244 QHYPQLHVVLFTSFPRDPRTPQDPSSVLKKSRRRGRGWTRALGPEQLLRA----CEAITV 299
+ + V+ +++ P + S + +R + T G +A E+ +
Sbjct: 231 KE--DVKVIFWSALAG--AIPLNGDSEEEANRDDRQSNTTKFGHSSFDQAEISHSESEHL 286
Query: 300 GKVDLSSWREKIARDVAGATWGNGSGEEEE------EEDGP------------------- 334
D S E D + + + EEE+ EEDGP
Sbjct: 287 PARDSPSLSENPTTDEDDSEYEDCPEEEEDDWQTCSEEDGPKEEDCSQDWKESSTADSEA 346
Query: 335 --------------AVLVEQQTDSAMEPTGPTQERYKDGVVTIGCVGFPNVGKSSLINGL 380
+ LV +Q + T + KDG +T+G VG+PNVGKSS IN +
Sbjct: 347 RSRKTPQKRQIHNFSHLVSKQELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTI 406
Query: 381 VGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQV-LAGIYPIAQIQE 439
+G K VSVS TPGHT++FQT ++ P + LCDCPGL+ PS + + ++ +GI PI Q+++
Sbjct: 407 MGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRD 466
Query: 440 PYTAVGYLASRIPVQAL-----LHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAA 494
V + IP L +++ P ED P + ++ A+ RG+ TA
Sbjct: 467 HVPPVSLVCQNIPRHVLEATYGINIITPR-EDEDPHRPPTSEELLTAYGYMRGFMTAH-G 524
Query: 495 RNDVYRAANSLLRLAVDGRLSLCFHPPG 522
+ D R+A +L+ V G+L C PPG
Sbjct: 525 QPDQPRSARYILKDYVSGKLLYCHPPPG 552
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 80.5 bits (197), Expect = 4e-15
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
+++G +G+PNVGKSS+IN L +KV +V+ G T+ +Q L + L DCPG+++PS
Sbjct: 311 ISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSE 370
Query: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
VL G+ + +I+ P +G + L + E S + +W+ E
Sbjct: 371 DSETDIVLKGVVQVEKIKSPEDHIGAV-----------LERAKPEYISKTYKIDSWENAE 419
Query: 481 AWAEKRGYKTAKAARN---DVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETT 537
+ EK ++T K + D+ +L GR+ PP +E + P ++
Sbjct: 420 DFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPN-AEPLVAPQLLPSSS 478
Query: 538 ELVVLQGRVGPAGDEEEEEEEELSSS-CEEEGEEDRDADEEGE 579
VV + G+E E E S S +EE EE+ D E
Sbjct: 479 LEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTE 521
Score = 46.6 bits (109), Expect = 7e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 178 WRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELGLA-LVLVLNKVDLAPPALVV 236
W +L++V++ SD+V+ + D R P+ P + Y+ E L+ VLNK DL P
Sbjct: 207 WGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATK 266
Query: 237 AWKHYFHQHYPQL 249
W Q YP L
Sbjct: 267 RWVAVLSQDYPTL 279
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 65.5 bits (158), Expect = 1e-10
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
+ +G VG PNVGKSSLIN L + SV PG T++ Q +L ++L D PG++ P
Sbjct: 253 IRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIV-PGP 311
Query: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
+L + ++ +P T PV+ + L+ E+ S + + E
Sbjct: 312 NSEVGTILRNCVHVQKLADPVT---------PVETI--LQRCNLEEISNYYGVSGFQTTE 360
Query: 481 AWAEKRGYKTAKAARNDVY---RAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETT 537
+ ++ K + +Y +AA ++L V G++S PP T +H +
Sbjct: 361 HFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPPA----THTLPTH-LSA 415
Query: 538 ELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEED 571
E+V V D E+ E+ + C GE D
Sbjct: 416 EIVKEMTEVFDIEDTEQANEDTM--ECLATGESD 447
Score = 42.0 bits (97), Expect = 0.002
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 178 WRQLWRVLEMSDIVLLITDIRHPVVNFPPALYEYVTGELG-LALVLVLNKVDLAPPALVV 236
+++ +V+E SD++L + D R P+ + E V G LVLVLNK+DL P +V
Sbjct: 125 YKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVE 184
Query: 237 AWKHYFHQHYP 247
W Y P
Sbjct: 185 KWLDYLRNELP 195
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 50.8 bits (120), Expect = 4e-06
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 53/281 (18%)
Query: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
+ +G +GFPNVGKSS+IN L ++ +V + G TR Q L + + D P I L
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 302
Query: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
L I ++ A L+ Q +L P + + +
Sbjct: 303 NSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN--------SLEFFT 354
Query: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
A++RG K +V AA L L+ HPP +W P E +
Sbjct: 355 VLAQRRGMH-QKGGIPNVEGAAKLLWSEWTGASLAYYCHPP------TSWTPPPYFNESI 407
Query: 541 VLQGRVG-----------------------------PAG-----DEEEEEEEELSSSCE- 565
V+ + G +G EE++ EEL E
Sbjct: 408 VVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKER 467
Query: 566 --EEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYALLGE 604
EE E+D+D+D+E DEE ++ G A AL E
Sbjct: 468 KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEE 507
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 50.8 bits (120), Expect = 4e-06
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 53/281 (18%)
Query: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
+ +G +GFPNVGKSS+IN L ++ +V + G TR Q L + + D P I L
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 302
Query: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
L I ++ A L+ Q +L P + + +
Sbjct: 303 NSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN--------SLEFFT 354
Query: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
A++RG K +V AA L L+ HPP +W P E +
Sbjct: 355 VLAQRRGMH-QKGGIPNVEGAAKLLWSEWTGASLAYYCHPP------TSWTPPPYFNESI 407
Query: 541 VLQGRVG-----------------------------PAG-----DEEEEEEEELSSSCE- 565
V+ + G +G EE++ EEL E
Sbjct: 408 VVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKER 467
Query: 566 --EEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYALLGE 604
EE E+D+D+D+E DEE ++ G A AL E
Sbjct: 468 KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEE 507
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 50.8 bits (120), Expect = 4e-06
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 53/281 (18%)
Query: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
+ +G +GFPNVGKSS+IN L ++ +V + G TR Q L + + D P I L
Sbjct: 255 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 314
Query: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
L I ++ A L+ Q +L P + + +
Sbjct: 315 NSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN--------SLEFFT 366
Query: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
A++RG K +V AA L L+ HPP +W P E +
Sbjct: 367 VLAQRRGMH-QKGGIPNVEGAAKLLWSEWTGASLAYYCHPP------TSWTPPPYFNESI 419
Query: 541 VLQGRVG-----------------------------PAG-----DEEEEEEEELSSSCE- 565
V+ + G +G EE++ EEL E
Sbjct: 420 VVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKER 479
Query: 566 --EEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYALLGE 604
EE E+D+D+D+E DEE ++ G A AL E
Sbjct: 480 KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEE 519
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 520 PPGYSEQKGTWESHPETTE-LVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEG 578
PP + WE PE E L V G+EEEEEEEE +E EE+ D D+E
Sbjct: 35 PPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEE------DEEEEEDDDDDEL 88
Query: 579 EGDEETPTSAPGSS 592
E + E S P +
Sbjct: 89 EDEGEEEASMPNEN 102
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 520 PPGYSEQKGTWESHPETTE-LVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEG 578
PP + WE PE E L V G+EEEEEEEE +E EE+ D D+E
Sbjct: 236 PPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEE------DEEEEEDDDDDEL 289
Query: 579 EGDEETPTSAPGSS 592
E + E S P +
Sbjct: 290 EDEGEEEASMPNEN 303
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 520 PPGYSEQKGTWESHPETTE-LVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEG 578
PP + WE PE E L V G+EEEEEEEE +E EE+ D D+E
Sbjct: 236 PPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEE------DEEEEEDDDDDEL 289
Query: 579 EGDEETPTSAPGSS 592
E + E S P +
Sbjct: 290 EDEGEEEASMPNEN 303
>gi|24307899 Era-like 1 [Homo sapiens]
Length = 437
Score = 42.7 bits (99), Expect = 0.001
Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 24/123 (19%)
Query: 315 VAGATWGNGSGEEEEEEDGPAVLVEQQTDSAMEPTGPTQERYKDG--------------- 359
+A A+ NG G + L Q DS++ P P +D
Sbjct: 57 LASASRSNGQGSALDH-----FLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENS 111
Query: 360 -VVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLT---PSVKLCDCPGL 415
V+ + +G PN GKS+L N L+GRKV VSR TR +T V L D PG+
Sbjct: 112 RVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGI 171
Query: 416 IFP 418
I P
Sbjct: 172 ISP 174
>gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 550 GDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
GDE EEE E++ E+EGEED D DE EG+E+
Sbjct: 264 GDEGEEELEDIDEGDEDEGEEDEDDDEGEEGEED 297
>gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 550 GDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
GDE EEE E++ E+EGEED D DE EG+E+
Sbjct: 264 GDEGEEELEDIDEGDEDEGEEDEDDDEGEEGEED 297
>gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 550 GDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
GDE EEE E++ E+EGEED D DE EG+E+
Sbjct: 264 GDEGEEELEDIDEGDEDEGEEDEDDDEGEEGEED 297
>gi|7657455 pescadillo homolog 1, containing BRCT domain [Homo
sapiens]
Length = 588
Score = 42.0 bits (97), Expect = 0.002
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 498 VYRAANSLLRLAVDGRLSLCFHPPGYS----EQKGTWESHPETTELVVLQGRVGPAGDEE 553
V+ + N+ L L V S PP S E++G + PE +L+ LQ P E
Sbjct: 398 VFDSVNARLLLPVAEYFSGVQLPPHLSPFVTEKEGDYVP-PEKLKLLALQRGEDPGNLNE 456
Query: 554 EEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGS 591
EEEE EE+ + D DEEGE +EE + GS
Sbjct: 457 SEEEE------EEDDNNEGDGDEEGENEEEEEDAEAGS 488
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 41.6 bits (96), Expect = 0.002
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 515 SLCFHPPGYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDA 574
S + PP E G E+ + + ++ G + EEE E E S EEE E++ D
Sbjct: 64 SQAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDE 123
Query: 575 DEEGEGDEE 583
+ E + +EE
Sbjct: 124 ESEEDSEEE 132
Score = 37.0 bits (84), Expect = 0.053
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 524 SEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
SE++ E ET E DEE EE+ E E+E E + D EEGE + E
Sbjct: 101 SEEESESEEESETEE------ESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAE 154
Query: 584 TPTSA 588
T A
Sbjct: 155 GETEA 159
Score = 32.3 bits (72), Expect = 1.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 549 AGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPT 586
AG EE E + E E E E+ +++EE E +EE+ T
Sbjct: 76 AGKEEAEVKVEQEREIESEAGEESESEEESESEEESET 113
Score = 30.0 bits (66), Expect = 6.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 553 EEEEEEELSSSCEEEGEEDRDADEEGEGDEET 584
E+E E E + E E EE+ +++EE E +EE+
Sbjct: 86 EQEREIESEAGEESESEEESESEEESETEEES 117
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 531 ESHPETT--ELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSA 588
E+H E E V G GD EEEEEEE EEE EE + +EE E +EE
Sbjct: 836 ENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEE 895
Query: 589 P 589
P
Sbjct: 896 P 896
Score = 35.8 bits (81), Expect = 0.12
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTS 587
+EEEEEE+E EE+ EE+ + +EE E E P S
Sbjct: 862 EEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLS 898
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 531 ESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
ES P T E L + +EEEEEE+E EEE EED + +EE E +EE
Sbjct: 1050 ESRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEE 1102
Score = 40.0 bits (92), Expect = 0.006
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 521 PGYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEG 580
P + K + PE+ + +G++ E EEEEE EEE EE+ + DEE E
Sbjct: 1036 PAKVQSKNKYLHSPESRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEE 1095
Query: 581 DEE 583
+EE
Sbjct: 1096 EEE 1098
Score = 37.7 bits (86), Expect = 0.031
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAP 589
DEEEEEEEE EEE +E+ + +EE E +EE S+P
Sbjct: 1077 DEEEEEEEE-----EEEEDEEEEEEEEEEEEEENIQSSP 1110
Score = 34.3 bits (77), Expect = 0.34
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYAL 601
+EEEEEEEE EEE EE+ + +E + T ++ + P+ L
Sbjct: 1079 EEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRKRPFVL 1129
Score = 33.9 bits (76), Expect = 0.45
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 546 VGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSA 588
+ P +EEEEEEEE EEE EE+ + +E G E+ P A
Sbjct: 1348 IKPEEEEEEEEEEE-----EEEEEEEGEEEEGGGNVEKDPDGA 1385
Score = 30.8 bits (68), Expect = 3.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+EEEEEEEE EEEG + + D +G +E
Sbjct: 1357 EEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQE 1389
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 41.2 bits (95), Expect = 0.003
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 549 AGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+ DEEEEEEEE EEE EE+ D +EE E +EE
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEE 919
Score = 35.4 bits (80), Expect = 0.15
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 551 DEEEEEEEELSSSC-EEEGEEDRDADEEGEGDEE 583
+EEEEEEEE EEEGE + + +EE E +EE
Sbjct: 922 EEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEE 955
Score = 35.0 bits (79), Expect = 0.20
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+EEEEEEEE EEE E++ + EE E +EE
Sbjct: 897 EEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEE 929
Score = 33.5 bits (75), Expect = 0.58
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+EEEEEEEE EEE +E+ +EE E +EE
Sbjct: 898 EEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEE 930
Score = 32.7 bits (73), Expect = 0.99
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+EEEE+EEE EEE EE + EE EG+ E
Sbjct: 911 EEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELE 943
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 544 GRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
G GP EE+ ++SS EEE EE+ + +EE E +EE
Sbjct: 867 GGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEE 906
Score = 32.0 bits (71), Expect = 1.7
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+EEEEEEEE E+ EE+ D +E E +EE
Sbjct: 894 EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEE 926
Score = 31.6 bits (70), Expect = 2.2
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+EEEEEEEE EE EED + E E +EE
Sbjct: 896 EEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEE 928
Score = 30.0 bits (66), Expect = 6.4
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 551 DEEE--EEEEELSSSCEEEGEEDRDADEEGEGDEE 583
DEEE EEEEE EEE EE+ EE E +E+
Sbjct: 916 DEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEED 950
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 41.2 bits (95), Expect = 0.003
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 525 EQKGTWESHPETTELVVLQGRVGPA------GDEEEEEEEELSSSCEEEGEEDRDADEEG 578
E++G WE E E + G G+EEE E E EEEGEE+ + +EEG
Sbjct: 950 EEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG 1009
Query: 579 EGDEE 583
EG+ E
Sbjct: 1010 EGEGE 1014
Score = 36.6 bits (83), Expect = 0.069
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 547 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
G G+ EEE EE EEEGE + + + EGEG+EE
Sbjct: 862 GEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEE 898
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 525 EQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDE 582
EQK + H + + +G G+EE E EE EEE E++ + EEGEG+E
Sbjct: 711 EQKEREQGHQKERNQEMEEG-----GEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEE 763
Score = 35.4 bits (80), Expect = 0.15
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 525 EQKGTWESHPETTELVVLQGRVGPAGDEEEE-------EEEELSSSCEEEGEEDRDADEE 577
E+KG E E +GR G+E+EE E EE EEE EE +EE
Sbjct: 784 EEKGEEEGDQGEGEEEETEGR----GEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEE 839
Query: 578 GEGDEE 583
GEG+EE
Sbjct: 840 GEGEEE 845
Score = 35.0 bits (79), Expect = 0.20
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGD 581
G E++G E E +G G +EE EEE E EEEGE + + +EEGE +
Sbjct: 964 GEGEEEGEGEGEEGEGEGEEEEGE-GEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVE 1022
Query: 582 EE 583
E
Sbjct: 1023 GE 1024
Score = 34.7 bits (78), Expect = 0.26
Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 525 EQKGTWESHPETTELVVLQGRVGPAGDEEEEE--EEELSSSCEEEGEEDRDADE----EG 578
E KG E E E +G G+EEE E EEE EEEGEE +E EG
Sbjct: 821 EGKGEREEEEEEGEGEEEEGE----GEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG 876
Query: 579 EGDEE 583
EG+EE
Sbjct: 877 EGEEE 881
Score = 34.3 bits (77), Expect = 0.34
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 543 QGRVGPAGDEEEE-----EEEELSSSCEEEGEEDRDADEEGEGDEE 583
+G G EEEE EEE EEEGE + + + EGEG+EE
Sbjct: 870 EGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEE 915
Score = 34.3 bits (77), Expect = 0.34
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 543 QGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
+G G+ E EEEEE E EGEE EE EG+EE
Sbjct: 1002 EGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEE 1042
Score = 33.9 bits (76), Expect = 0.45
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGD 581
G E++G E E E G E E EEEE EEEGEE EE EG+
Sbjct: 885 GEGEEEGEGEGEEEEGE------GEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGE 938
Query: 582 EE 583
E
Sbjct: 939 GE 940
Score = 33.9 bits (76), Expect = 0.45
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRVGPA-GDEEEEEEEELSSSCEEEGEEDRDADEEGEG 580
G E +G E E ++G G G+EEE EEE E EGEE+R EE E
Sbjct: 1005 GEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEE 1064
Query: 581 DE 582
+E
Sbjct: 1065 EE 1066
Score = 33.5 bits (75), Expect = 0.58
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADE----- 576
G E++ T E E ++G G E EEEEE EEEGE + + E
Sbjct: 794 GEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEE 853
Query: 577 -EGEGDEE 583
EG+G+EE
Sbjct: 854 GEGKGEEE 861
Score = 33.5 bits (75), Expect = 0.58
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRV-GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEG 580
G E++G E E E ++G V G G+ E EEEE EEEGEE ++EGEG
Sbjct: 1003 GEGEEEGEGEGEEE--EEGEVEGEVEGEEGEGEGEEEEG-----EEEGEE---REKEGEG 1052
Query: 581 DEETPTSAPGSSLAGRNPYALLGEDE 606
+E G+ Y GE+E
Sbjct: 1053 EENRRNREEEEEEEGK--YQETGEEE 1076
Score = 33.1 bits (74), Expect = 0.76
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEE---EELSSSCEEEGEEDRDADEEG 578
G E + E E E + R G +++E E+ +E + EE GEE+ EE
Sbjct: 682 GRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEE 741
Query: 579 EGDEETPTSAPG 590
EGD E G
Sbjct: 742 EGDREEEEEKEG 753
Score = 33.1 bits (74), Expect = 0.76
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 553 EEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
EE EEE EEEG+ + + ++EGEG EE
Sbjct: 728 EEGGEEEHGEGEEEEGDREEEEEKEGEGKEE 758
Score = 33.1 bits (74), Expect = 0.76
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 543 QGRVGPAGDEEEE-----EEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRN 597
+G G +E EE EEEE EEEGE + + +EEGEG+ E G G
Sbjct: 861 EGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE-EEEGEGEGEEEGEGEGEEEEGEG 919
Query: 598 PYALLGED 605
GE+
Sbjct: 920 KGEEEGEE 927
Score = 33.1 bits (74), Expect = 0.76
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 547 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDE 582
G G+ E EEEE EEEGE + + + EGEG+E
Sbjct: 941 GEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEE 976
Score = 32.7 bits (73), Expect = 0.99
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 550 GDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
G+EE EEE E E EGEE+ + + EGE + E
Sbjct: 995 GEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGE 1028
Score = 32.3 bits (72), Expect = 1.3
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 522 GYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDA----DEE 577
G E++G E E E + G+ EEEE E E EGEE+ +EE
Sbjct: 902 GEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEE 961
Query: 578 GEGDEETPTSAPGSSLAGRNPYALLGEDE 606
GEG+ E G G GE+E
Sbjct: 962 GEGEGEEEGEGEGEEGEGE------GEEE 984
Score = 31.6 bits (70), Expect = 2.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 550 GDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
GD EEEEE+E E EGEE E+ EG+ +
Sbjct: 743 GDREEEEEKEGEGKEEGEGEEVEGEREKEEGERK 776
Score = 29.6 bits (65), Expect = 8.4
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 547 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
G EE E ++E + EE+GEE+ D +GEG+EE
Sbjct: 766 GEREKEEGERKKEERAGKEEKGEEEGD---QGEGEEE 799
>gi|56711320 hypothetical protein LOC145407 [Homo sapiens]
Length = 774
Score = 41.2 bits (95), Expect = 0.003
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAG 595
DEE+EE+E+ EEE EED+DAD EG + T PG +L G
Sbjct: 617 DEEDEEDEDEEEEDEEEDEEDKDADSLDEG-LDGDTELPGFTLPG 660
Score = 29.6 bits (65), Expect = 8.4
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 521 PGYSEQKGTWESHPETTELVVLQGRVGPAGDE--EEEEEEELSSSCEEEGEEDRDADEEG 578
P S E+ E +V RV A ++ E EE +EE EED D +EE
Sbjct: 571 PSISPALPALEASSERRTVVPSITRVNTAASYGLDQLESEEGQEDEDEEDEEDEDEEEED 630
Query: 579 EGDEETPTSA 588
E ++E A
Sbjct: 631 EEEDEEDKDA 640
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 40.8 bits (94), Expect = 0.004
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 546 VGPAGDEEEEEEEELSSSC----EEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYAL 601
VG E EEE+EE+ EEE EE+ + +EE E +EE P + P S Y+L
Sbjct: 106 VGEEETEREEEDEEIQEEGGEEEEEEEEEEEEEEEEEEEEEEQPRAGPQGSGGNHEQYSL 165
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 40.8 bits (94), Expect = 0.004
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 524 SEQKGTWESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
S+QKG SH E E + +EE+EEEEE EEE EE+ + +EE E +EE
Sbjct: 249 SKQKGIL-SHEEEDE----EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Query: 584 TPTSAP 589
+AP
Sbjct: 304 EEEAAP 309
Score = 31.2 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNP 598
+EEEEEEEE EEE EE+ +A + E+T ++ + R P
Sbjct: 284 EEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGP 331
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 39.7 bits (91), Expect = 0.008
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 545 RVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEG 580
+V PA +E EEEEEE + EEE EE+ + +EE EG
Sbjct: 455 KVEPAEEEAEEEEEEEEAEEEEEEEEEEEEEEEDEG 490
Score = 30.0 bits (66), Expect = 6.4
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSS 592
+EEEEEEEE C+ + D + E EE P +A GSS
Sbjct: 478 EEEEEEEEEEDEGCKGLFPSELDEELEDRPHEE-PGAAAGSS 518
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 39.3 bits (90), Expect = 0.011
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 552 EEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGR 596
EEEEEEEE EEE EE+ + +EE E DEE+ + S +GR
Sbjct: 300 EEEEEEEE-----EEEEEEEEEEEEEEEEDEESGNQSDRSGSSGR 339
Score = 30.4 bits (67), Expect = 4.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 552 EEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGS 591
E E E+LS EEE EE+ + +EE E +EE G+
Sbjct: 290 EVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGN 329
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 39.3 bits (90), Expect = 0.011
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 552 EEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGR 596
EEEEEEEE EEE EE+ + +EE E DEE+ + S +GR
Sbjct: 300 EEEEEEEE-----EEEEEEEEEEEEEEEEDEESGNQSDRSGSSGR 339
Score = 30.4 bits (67), Expect = 4.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 552 EEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGS 591
E E E+LS EEE EE+ + +EE E +EE G+
Sbjct: 290 EVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGN 329
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 39.3 bits (90), Expect = 0.011
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 548 PAGDEEEEEEEELSSSCEEEGEE--DRDADEEGEGDEETPTSAPGSSLAGRNPYALLGED 605
P DEEEEEEE + S EEE EE D + +EE E +E + GR P G D
Sbjct: 4 PLRDEEEEEEEMVVSEEEEEEEEEGDEEEEEEVEAADEDDEEDDDEGVLGRGPGHDRGRD 63
Score = 29.6 bits (65), Expect = 8.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 531 ESHPETTELVVLQGRVGPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEG 580
+ E E+VV + + +EEEEEE+ ++ +E+ EED D G G
Sbjct: 7 DEEEEEEEMVVSEEEEEEEEEGDEEEEEEVEAA-DEDDEEDDDEGVLGRG 55
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 39.3 bits (90), Expect = 0.011
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
D+E+EEEEE EEE EE+ + DEE E +EE
Sbjct: 359 DDEDEEEEEEGEEEEEEAEEEEEEDEEEEEEEE 391
Score = 38.9 bits (89), Expect = 0.014
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRNP 598
+EEEEE EE EEE EED + +EE E +EE G P
Sbjct: 363 EEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATP 410
Score = 34.3 bits (77), Expect = 0.34
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 550 GDEEEEEEEELSSSCEEEGEEDRDADEE-----GEGDEETPTS 587
G+EEEEE EE EEE EE+ + +EE G+G++ S
Sbjct: 369 GEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPS 411
Score = 30.8 bits (68), Expect = 3.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 551 DEEEEEEEELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSSLAGRN 597
+EEE EEEE EEE EE+ + +E + + ++ P + N
Sbjct: 372 EEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPSRKILDPN 418
Score = 30.4 bits (67), Expect = 4.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 547 GPAGDEEEEEEEELSSSCEEEGEEDRDADEEGEGDEE 583
G +EE EEEEE EEE EE+ + + + G E
Sbjct: 369 GEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGE 405
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 39.3 bits (90), Expect = 0.011
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 502 ANSLLRLAVDGRLS----LCFHPPGYSEQKGTWESHPETTELVVLQGRVGPAGDEEEEEE 557
A L LA +G LS L + Y+ G+ E E E+ P G E EE
Sbjct: 430 AMELSELAREGELSMEELLQQYAGAYAPGSGSSEDEDED-EVDANSSDCEPEGPVEAEEP 488
Query: 558 EELSSSCEEEGEEDRDADEEGEGDEETPTSAPGSS 592
+ SS + + EDR DEE E EE TS +S
Sbjct: 489 PQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSAS 523
Score = 32.7 bits (73), Expect = 0.99
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 551 DEEEEEEEELSSSCEEEGE--EDRDADEEGEGDEE 583
DE EEEE SS EE E E DA + + DEE
Sbjct: 509 DEHSEEEETSGSSASEESESEESEDAQSQSQADEE 543
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 38.9 bits (89), Expect = 0.014
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 542 LQGRVGPAGDEEEEEEE----ELSSSCEEEGEEDRDADEEGEGDEETPTSAP 589
+QGR G E E+EE E+ +EEGEE R+ EE E E P S P
Sbjct: 1249 VQGRAEALGKVESEQEELGSGEIPEGPQEEGEESREESEEDELGETLPDSTP 1300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,505,964
Number of Sequences: 37866
Number of extensions: 1412271
Number of successful extensions: 17955
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 9778
Number of HSP's gapped (non-prelim): 4756
length of query: 607
length of database: 18,247,518
effective HSP length: 108
effective length of query: 499
effective length of database: 14,157,990
effective search space: 7064837010
effective search space used: 7064837010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.