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Search of human proteins with 38679907
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38679907 tumor protein p63 regulated 1-like [Homo sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38679907 tumor protein p63 regulated 1-like [Homo sapiens] 550 e-157
gi|38348286 tumor protein p63 regulated 1 [Homo sapiens] 246 2e-65
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 35 0.053
gi|134142824 forkhead box D2 [Homo sapiens] 35 0.091
gi|194097448 RELT-like 2 [Homo sapiens] 32 0.45
gi|194097446 RELT-like 2 [Homo sapiens] 32 0.45
gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens] 32 0.77
gi|124107614 PR domain containing 13 [Homo sapiens] 31 1.3
gi|66730481 neuregulin 3 [Homo sapiens] 30 1.7
gi|22035569 GC-rich sequence DNA-binding factor candidate isofor... 30 1.7
gi|22035565 GC-rich sequence DNA-binding factor candidate isofor... 30 1.7
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 30 1.7
gi|12707580 paired-like homeobox 2b [Homo sapiens] 30 2.2
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 30 2.2
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 30 2.9
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 30 2.9
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 30 2.9
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 30 2.9
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 30 2.9
gi|39995084 integrator complex subunit 3 [Homo sapiens] 30 2.9
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 29 5.0
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 29 5.0
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 29 5.0
gi|32171221 GRP1 (general receptor for phosphoinositides 1)-asso... 29 5.0
gi|47777330 hypothetical protein LOC115939 [Homo sapiens] 29 5.0
gi|223633890 hypothetical protein LOC729956 [Homo sapiens] 28 6.5
>gi|38679907 tumor protein p63 regulated 1-like [Homo sapiens]
Length = 272
Score = 550 bits (1418), Expect = e-157
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MLQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWPLSIHDPTRRARV 60
MLQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWPLSIHDPTRRARV
Sbjct: 1 MLQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWPLSIHDPTRRARV 60
Query: 61 KEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQGVWLLTEVDHWNNEKERLVLVTEQSLLIC 120
KEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQGVWLLTEVDHWNNEKERLVLVTEQSLLIC
Sbjct: 61 KEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQGVWLLTEVDHWNNEKERLVLVTEQSLLIC 120
Query: 121 KYDFISLQCQQVVRIALNAVDTISYGEFQFPPKSLNKREGFGIRIQWDKQSRPSFINRWN 180
KYDFISLQCQQVVRIALNAVDTISYGEFQFPPKSLNKREGFGIRIQWDKQSRPSFINRWN
Sbjct: 121 KYDFISLQCQQVVRIALNAVDTISYGEFQFPPKSLNKREGFGIRIQWDKQSRPSFINRWN 180
Query: 181 PWSTNVPYATFTEHPMAGADEKTASLCQLESFKALLIQAVKKAQKESPLPGQANGVLILE 240
PWSTNVPYATFTEHPMAGADEKTASLCQLESFKALLIQAVKKAQKESPLPGQANGVLILE
Sbjct: 181 PWSTNVPYATFTEHPMAGADEKTASLCQLESFKALLIQAVKKAQKESPLPGQANGVLILE 240
Query: 241 RPLLIETYVGLMSFINNEAKLGYSMTRGKIGF 272
RPLLIETYVGLMSFINNEAKLGYSMTRGKIGF
Sbjct: 241 RPLLIETYVGLMSFINNEAKLGYSMTRGKIGF 272
>gi|38348286 tumor protein p63 regulated 1 [Homo sapiens]
Length = 275
Score = 246 bits (627), Expect = 2e-65
Identities = 119/228 (52%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 45 TLWPLSIHDPTRRARVKEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQGVWLLTEVDHWNN 104
TL+P H P ++YF RPG+IE A+E+++ V IQG WLLT++DHWNN
Sbjct: 51 TLYPNPYHQPYIS---RKYFATRPGAIETAMEDLKGHVAETSGETIQGFWLLTKIDHWNN 107
Query: 105 EKERLVLVTEQSLLICKYDFISLQCQQVVRIALNAVDTISYGEFQFPPKSLNKREGFGIR 164
EKER++LVT+++LLICKYDFI L C Q+ RI L+AV I G+F FP SL+KR+G G+R
Sbjct: 108 EKERILLVTDKTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFTFPGMSLDKRQGEGLR 167
Query: 165 IQWDKQSRPSFINRWNPWSTNVPYATFTEHPMAGADEKTASLCQLESFKALLIQAVKKAQ 224
I W S ++RWNPWST VPYATFTEHPM EK +C+L F + L+ A++ A
Sbjct: 168 IYWGSPEEQSLLSRWNPWSTEVPYATFTEHPMKYTSEKFLEICKLSGFMSKLVPAIQNAH 227
Query: 225 KESPLPGQANGVLILERPLLIETYVGLMSFINNEAKLGYSMTRGKIGF 272
K S G+ +++L P+LIETY GLMSFI N KLGYS+ RG IGF
Sbjct: 228 KNSTGSGRGKKLMVLTEPILIETYTGLMSFIGNRNKLGYSLARGSIGF 275
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 35.4 bits (80), Expect = 0.053
Identities = 28/57 (49%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 10 SAGTSPTAVLAAGEEVGAGGGPG-GGRPGAGT-----PLRQT----LWPLSIHDPTR 56
SA SP AV AAG GAGGG G G P AG P+R T L S H PTR
Sbjct: 26 SAAGSPPAVAAAGSGNGAGGGGGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTR 82
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 34.7 bits (78), Expect = 0.091
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 7 SVDSAGTS---PTAVLAAGEEVGAGGGPGGGRPGAG 39
S +AGT+ PTA+L G + AGGG GGG GAG
Sbjct: 372 SPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAG 407
>gi|194097448 RELT-like 2 [Homo sapiens]
Length = 303
Score = 32.3 bits (72), Expect = 0.45
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 4 LRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWP 48
L + D + T + G++ G G G GGG+P AG P + L P
Sbjct: 180 LHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPP 224
>gi|194097446 RELT-like 2 [Homo sapiens]
Length = 303
Score = 32.3 bits (72), Expect = 0.45
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 4 LRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWP 48
L + D + T + G++ G G G GGG+P AG P + L P
Sbjct: 180 LHEHRDGSPTDRSWGSGGGQDPGGGQGSGGGQPKAGMPAMERLPP 224
>gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens]
Length = 422
Score = 31.6 bits (70), Expect = 0.77
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 22 GEEVGAGGGPGGGRPGAGTPLRQTL 46
G GAGGGPGGG PG G LR+ L
Sbjct: 22 GAAPGAGGGPGGG-PGPGPCLRREL 45
>gi|124107614 PR domain containing 13 [Homo sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 1.3
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 5 RDSVDSAGTSPTAVLAAGEEVGAG-GGPGGGRPGAG 39
R +DS GT P AV AAG G G GG G G+P G
Sbjct: 538 RGRLDS-GTLPPAVAAAGGTGGGGSGGSGAGKPKTG 572
>gi|66730481 neuregulin 3 [Homo sapiens]
Length = 696
Score = 30.4 bits (67), Expect = 1.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 10 SAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQ 44
+A ++ AA AGGGP GG GA P R+
Sbjct: 17 AAASAEEGTAAAAAAAAAGGGPDGGGEGAAEPPRE 51
>gi|22035569 GC-rich sequence DNA-binding factor candidate isoform
2 [Homo sapiens]
Length = 815
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 6 DSVDSAGTSPTAVLAAGEEVGAGGG-PGGGRPGAGTPLRQ 44
+S+ G SP + L G AGGG PGG PG G R+
Sbjct: 54 ESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRK 93
>gi|22035565 GC-rich sequence DNA-binding factor candidate isoform
1 [Homo sapiens]
Length = 917
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 6 DSVDSAGTSPTAVLAAGEEVGAGGG-PGGGRPGAGTPLRQ 44
+S+ G SP + L G AGGG PGG PG G R+
Sbjct: 54 ESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRK 93
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 30.4 bits (67), Expect = 1.7
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 2 LQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAG 39
L S +A + A A G G GGG GGG G G
Sbjct: 390 LSCHSSQSAAAAAAAAAAALGSRGGGGGGGGGGGGGGG 427
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 30.0 bits (66), Expect = 2.2
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 6 DSVDSAGTSPTAVLAAGEEVGAGGGPG-GGRPGAGTP 41
DS G +P + G G GGGP G PGA P
Sbjct: 193 DSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGP 229
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 30.0 bits (66), Expect = 2.2
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 12 GTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWPLSIHDPTRRARVKEYFVFRPGSI 71
G P V + A GPGGGR G G+ L + + S P + R E V R G
Sbjct: 31 GRDPNDVRPIQARLLALSGPGGGR-GRGSLLLRRGFSDSGGGPPAKQRDLEGAVSRLGGE 89
Query: 72 EQAVEEIRVVVRPVEDGEIQGVWLLTEVDHWNNEKERLVLVTEQSL 117
+ E R P ED +++ L + V + E+ R L+ +Q++
Sbjct: 90 RRTRRESRQESDP-EDDDVKKPALQSSVVATSKERTRRDLIQDQNM 134
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 29.6 bits (65), Expect = 2.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 12 GTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTL---WPLSIHDP 54
G +A G G G GPG G PG +PL + PL +H P
Sbjct: 723 GADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGP 768
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 29.6 bits (65), Expect = 2.9
Identities = 14/26 (53%), Positives = 14/26 (53%)
Query: 17 AVLAAGEEVGAGGGPGGGRPGAGTPL 42
AVL G E G GG GG AG PL
Sbjct: 814 AVLVQGHEAGVAGGARGGGAAAGGPL 839
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 29.6 bits (65), Expect = 2.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 12 GTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTL---WPLSIHDP 54
G +A G G G GPG G PG +PL + PL +H P
Sbjct: 158 GADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGP 203
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 29.6 bits (65), Expect = 2.9
Identities = 14/26 (53%), Positives = 14/26 (53%)
Query: 17 AVLAAGEEVGAGGGPGGGRPGAGTPL 42
AVL G E G GG GG AG PL
Sbjct: 814 AVLVQGHEAGVAGGARGGGAAAGGPL 839
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 29.6 bits (65), Expect = 2.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 12 GTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTL---WPLSIHDP 54
G +A G G G GPG G PG +PL + PL +H P
Sbjct: 320 GADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGP 365
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 29.6 bits (65), Expect = 2.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 10 SAGTSPTAVLAAGEEVGAGGGPGGGRPGAGT 40
+ G P AG+ GGGPGGG PG G+
Sbjct: 26 AGGGPPPGPPGAGDR--GGGGPGGGGPGGGS 54
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 29.6 bits (65), Expect = 2.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 21 AGEEVGAGGGPGGGR---PGAGTPLRQTLWPLSIHDPTRRAR 59
AG + GGPGGG+ P G P R+ L LS + RR R
Sbjct: 30 AGPDGAGPGGPGGGQARGPEPGEPGRKDLQHLSREERRRRRR 71
>gi|39995084 integrator complex subunit 3 [Homo sapiens]
Length = 1042
Score = 29.6 bits (65), Expect = 2.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 17 AVLAAGEEVGAGGGPGGGRPGAGTPLRQT 45
A A+G G GGG G G PG G L T
Sbjct: 12 AAAASGAAGGGGGGAGAGAPGGGRLLLST 40
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 29.3 bits (64), Expect = 3.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 2 LQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTL 46
L+ R S PT + G GGG GG +PG+ PL Q L
Sbjct: 47 LEPRHPPGSPALRPTDRTCSSSSAGVGGGVGGAQPGS-VPLGQHL 90
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 29.3 bits (64), Expect = 3.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 2 LQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTL 46
L+ R S PT + G GGG GG +PG+ PL Q L
Sbjct: 47 LEPRHPPGSPALRPTDRTCSSSSAGVGGGVGGAQPGS-VPLGQHL 90
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 28.9 bits (63), Expect = 5.0
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 14 SPTAVLAAGEEVGAGGGPGGGRPGAG 39
S AV AAG G GGG GGG G G
Sbjct: 52 SSPAVRAAGGGGGGGGGGGGGGGGGG 77
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 28.9 bits (63), Expect = 5.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 2 LQLRDS--VDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWP 48
++L+DS + + + P+A L+ +GAG G GGG G PL L P
Sbjct: 202 MKLQDSPLLSFSRSPPSATLSP---LGAGPGSGGGPAGGALPLESWLGP 247
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 28.9 bits (63), Expect = 5.0
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 15/57 (26%)
Query: 2 LQLRDSVDSAGTSPTAVL-----------AAGE----EVGAGGGPGGGRPGAGTPLR 43
L+ RD+ +++ P VL AA E E+GA GGPGGG G G R
Sbjct: 16 LEGRDAAEASMAPPHLVLLNGVAKETSRAAAAEPPVIELGARGGPGGGPAGGGGAAR 72
>gi|32171221 GRP1 (general receptor for phosphoinositides
1)-associated scaffold protein [Homo sapiens]
Length = 395
Score = 28.9 bits (63), Expect = 5.0
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 12 GTSPTAVLAAGEEV---GAGGGPGGGRPGA 38
G P A L+ V G GGG GGG PGA
Sbjct: 321 GPGPRAALSRSASVRCAGPGGGGGGGAPGA 350
>gi|47777330 hypothetical protein LOC115939 [Homo sapiens]
Length = 312
Score = 28.9 bits (63), Expect = 5.0
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 7 SVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQTLWPLSIHDPTR 56
S+++ A L A E GA G GG P A P +W L DP R
Sbjct: 24 SLEAFAEEVGAALQASVEPGAADGEGGPGP-AALPCTLAMWELGHCDPRR 72
>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
Length = 538
Score = 28.5 bits (62), Expect = 6.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 11 AGTSPTAVLAAGEEVGAGGGPGGGRPG 37
A T P AG GAGGGPG G+ G
Sbjct: 137 ATTPPPLAGGAGGAGGAGGGPGPGQAG 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,013,029
Number of Sequences: 37866
Number of extensions: 517423
Number of successful extensions: 3856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3708
Number of HSP's gapped (non-prelim): 123
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.