Guide to the Human Genome
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Name: MTX1 Sequence: fasta or formatted (466aa) NCBI GI: 38569475
Description:

metaxin 1 isoform 1

Referenced in:

Mitochondria

Other entries for this name:
alt prot [435aa] metaxin 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         43           2
 C cysteine            0.9          4           1
 D aspartate           2.6         12           1
 E glutamate           6.7         31           3
 F phenylalanine       3.2         15           3
 G glycine             9.0         42           3
 H histidine           2.6         12           1
 I isoleucine          2.4         11           2
 K lysine              3.4         16           1
 L leucine            10.9         51           3
 M methionine          2.1         10           1
 N asparagine          1.3          6           1
 P proline             9.7         45           2
 Q glutamine           3.6         17           1
 R arginine            9.2         43           3
 S serine              7.7         36           2
 T threonine           5.8         27           1
 V valine              4.7         22           1
 W tryptophan          2.1         10           1
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metaxin 1 isoform 1 
MTX1                  0.918   metaxin 1 isoform 2 
MTX3                  0.280   metaxin 3 
MTX2                  0.079   metaxin 2 
C6orf168              0.027   hypothetical protein LOC84553 
NFATC4                0.018   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.018   nuclear factor of activated T-cells, cytoplasmic, ca...
RBMXL3                0.016   RNA binding motif protein, X-linked-like 3 
LOC729570             0.016   PREDICTED: hypothetical protein 
LOC729570             0.016   PREDICTED: hypothetical protein 
LOC729570             0.016   PREDICTED: hypothetical protein 
BIN1                  0.016   bridging integrator 1 isoform 7 
BIN1                  0.016   bridging integrator 1 isoform 3 
LOC100292572          0.015   PREDICTED: hypothetical protein 
LMTK3                 0.015   lemur tyrosine kinase 3 
PRB2                  0.015   proline-rich protein BstNI subfamily 2 
LOC100292591          0.014   PREDICTED: hypothetical protein 
LOC100287994          0.014   PREDICTED: hypothetical protein 
LOC100287994          0.014   PREDICTED: hypothetical protein XP_002342988 
TENC1                 0.014   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.014   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.014   tensin like C1 domain containing phosphatase isoform...
ZNF469                0.014   zinc finger protein 469 
LOC283999             0.013   hypothetical protein LOC283999 
ANKRD33B              0.013   PREDICTED: ankyrin repeat domain 33B 
CASKIN2               0.013   cask-interacting protein 2 isoform b 
CASKIN2               0.013   cask-interacting protein 2 isoform a 
ALPK3                 0.013   alpha-kinase 3 
LOC730183             0.013   PREDICTED: hypothetical protein 
PTGER1                0.013   prostaglandin E receptor 1, subtype EP1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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