Guide to the Human Genome
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Name: MTX1 Sequence: fasta or formatted (435aa) NCBI GI: 38569477
Description:

metaxin 1 isoform 2

Referenced in:

Mitochondria

Other entries for this name:
alt prot [466aa] metaxin 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         39           2
 C cysteine            0.9          4           1
 D aspartate           2.1          9           1
 E glutamate           6.7         29           3
 F phenylalanine       3.2         14           3
 G glycine             9.4         41           3
 H histidine           2.8         12           1
 I isoleucine          2.5         11           2
 K lysine              3.2         14           1
 L leucine            10.1         44           3
 M methionine          2.1          9           1
 N asparagine          1.1          5           1
 P proline            10.1         44           2
 Q glutamine           3.7         16           1
 R arginine            9.7         42           3
 S serine              7.8         34           2
 T threonine           6.0         26           1
 V valine              4.8         21           1
 W tryptophan          2.3         10           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metaxin 1 isoform 2 
MTX1                  0.981   metaxin 1 isoform 1 
MTX3                  0.225   metaxin 3 
MTX2                  0.060   metaxin 2 
HSP90AB1              0.021   heat shock 90kDa protein 1, beta 
NFATC4                0.019   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.019   nuclear factor of activated T-cells, cytoplasmic, ca...
RBMXL3                0.017   RNA binding motif protein, X-linked-like 3 
HSP90AA1              0.017   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.017   heat shock 90kDa protein 1, alpha isoform 1 
LOC729570             0.017   PREDICTED: hypothetical protein 
LOC729570             0.017   PREDICTED: hypothetical protein 
LOC729570             0.017   PREDICTED: hypothetical protein 
BIN1                  0.017   bridging integrator 1 isoform 7 
BIN1                  0.017   bridging integrator 1 isoform 3 
C6orf168              0.016   hypothetical protein LOC84553 
LOC100292572          0.016   PREDICTED: hypothetical protein 
LMTK3                 0.016   lemur tyrosine kinase 3 
PRB2                  0.016   proline-rich protein BstNI subfamily 2 
SPTY2D1               0.016   SPT2, Suppressor of Ty, domain containing 1 
LOC100292591          0.015   PREDICTED: hypothetical protein 
LOC100287994          0.015   PREDICTED: hypothetical protein 
LOC100287994          0.015   PREDICTED: hypothetical protein XP_002342988 
TENC1                 0.015   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.015   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.015   tensin like C1 domain containing phosphatase isoform...
ZNF469                0.015   zinc finger protein 469 
LOC283999             0.014   hypothetical protein LOC283999 
ANKRD33B              0.014   PREDICTED: ankyrin repeat domain 33B 
CASKIN2               0.014   cask-interacting protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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