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Search of human proteins with 38524594
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38524594 TCDD-inducible poly(ADP-ribose) polymerase [Homo
sapiens]
(657 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38524594 TCDD-inducible poly(ADP-ribose) polymerase [Homo sap... 1372 0.0
gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens] 202 1e-51
gi|22749259 poly (ADP-ribose) polymerase family, member 15 isofo... 140 5e-33
gi|165377137 poly (ADP-ribose) polymerase family, member 15 isof... 140 5e-33
gi|194328777 poly (ADP-ribose) polymerase family, member 11 [Hom... 138 2e-32
gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens] 136 5e-32
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom... 131 2e-30
gi|157738665 poly (ADP-ribose) polymerase family, member 10 [Hom... 111 2e-24
gi|226371716 poly (ADP-ribose) polymerase family, member 9 isofo... 70 8e-12
gi|226371714 poly (ADP-ribose) polymerase family, member 9 isofo... 70 8e-12
gi|226371712 poly (ADP-ribose) polymerase family, member 9 isofo... 70 8e-12
gi|226371710 poly (ADP-ribose) polymerase family, member 9 isofo... 70 8e-12
gi|226371706 poly (ADP-ribose) polymerase family, member 9 isofo... 70 8e-12
gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 57 7e-08
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 49 2e-05
gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens] 49 2e-05
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 35 0.17
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 35 0.17
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 33 0.83
gi|156523968 poly (ADP-ribose) polymerase family, member 1 [Homo... 32 1.4
gi|61102725 la related protein isoform 2 [Homo sapiens] 32 1.9
gi|39725634 la related protein isoform 1 [Homo sapiens] 32 1.9
gi|110825963 poly (ADP-ribose) polymerase family, member 2 isofo... 32 2.4
gi|110825961 poly (ADP-ribose) polymerase family, member 2 isofo... 32 2.4
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 32 2.4
gi|62955042 PAR-6 beta [Homo sapiens] 31 3.2
gi|30061567 La ribonucleoprotein domain family member 2 isoform ... 31 4.1
gi|37574618 hemogen [Homo sapiens] 31 4.1
gi|37574622 hemogen [Homo sapiens] 31 4.1
gi|61969666 arginine-fifty homeobox [Homo sapiens] 31 4.1
>gi|38524594 TCDD-inducible poly(ADP-ribose) polymerase [Homo
sapiens]
Length = 657
Score = 1372 bits (3551), Expect = 0.0
Identities = 657/657 (100%), Positives = 657/657 (100%)
Query: 1 MEMETTEPEPDCVVQPPSPPDDFSCQMRLSEKITPLKTCFKKKDQKRLGTGTLRSLRPIL 60
MEMETTEPEPDCVVQPPSPPDDFSCQMRLSEKITPLKTCFKKKDQKRLGTGTLRSLRPIL
Sbjct: 1 MEMETTEPEPDCVVQPPSPPDDFSCQMRLSEKITPLKTCFKKKDQKRLGTGTLRSLRPIL 60
Query: 61 NTLLESGSLDGVFRSRNQSTDENSLHEPMMKKAMEINSSCPPAENNMSVLIPDRTNVGDQ 120
NTLLESGSLDGVFRSRNQSTDENSLHEPMMKKAMEINSSCPPAENNMSVLIPDRTNVGDQ
Sbjct: 61 NTLLESGSLDGVFRSRNQSTDENSLHEPMMKKAMEINSSCPPAENNMSVLIPDRTNVGDQ 120
Query: 121 IPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQTDLLHPVSSDVPTSPDCLDK 180
IPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQTDLLHPVSSDVPTSPDCLDK
Sbjct: 121 IPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQTDLLHPVSSDVPTSPDCLDK 180
Query: 181 VIDYVPGIFQENSFTIQYILDTSDKLSTELFQDKSEEASLDLVFELVNQLQYHTHQENGI 240
VIDYVPGIFQENSFTIQYILDTSDKLSTELFQDKSEEASLDLVFELVNQLQYHTHQENGI
Sbjct: 181 VIDYVPGIFQENSFTIQYILDTSDKLSTELFQDKSEEASLDLVFELVNQLQYHTHQENGI 240
Query: 241 EICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCNPENDR 300
EICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCNPENDR
Sbjct: 241 EICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCNPENDR 300
Query: 301 MRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPSSNVNSIYHTVWKFFCRDHFGWREY 360
MRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPSSNVNSIYHTVWKFFCRDHFGWREY
Sbjct: 301 MRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPSSNVNSIYHTVWKFFCRDHFGWREY 360
Query: 361 PESVIRLIEEANSRGLKEVRFMMWNNHYILHNSFFRREIKRRPLFRSCFILLPYLQTLGG 420
PESVIRLIEEANSRGLKEVRFMMWNNHYILHNSFFRREIKRRPLFRSCFILLPYLQTLGG
Sbjct: 361 PESVIRLIEEANSRGLKEVRFMMWNNHYILHNSFFRREIKRRPLFRSCFILLPYLQTLGG 420
Query: 421 VPTQAPPPLEATSSSQIICPDGVTSANFYPETWVYMHPSQDFIQVPVSAEDKSYRIIYNL 480
VPTQAPPPLEATSSSQIICPDGVTSANFYPETWVYMHPSQDFIQVPVSAEDKSYRIIYNL
Sbjct: 421 VPTQAPPPLEATSSSQIICPDGVTSANFYPETWVYMHPSQDFIQVPVSAEDKSYRIIYNL 480
Query: 481 FHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVD 540
FHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVD
Sbjct: 481 FHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVD 540
Query: 541 GICKHNFDPRVCGKHATMFGQGSYFAKKASYSHNFSKKSSKGVHFMFLAKVLTGRYTMGS 600
GICKHNFDPRVCGKHATMFGQGSYFAKKASYSHNFSKKSSKGVHFMFLAKVLTGRYTMGS
Sbjct: 541 GICKHNFDPRVCGKHATMFGQGSYFAKKASYSHNFSKKSSKGVHFMFLAKVLTGRYTMGS 600
Query: 601 HGMRRPPPVNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYEEVSNTVSI 657
HGMRRPPPVNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYEEVSNTVSI
Sbjct: 601 HGMRRPPPVNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYEEVSNTVSI 657
>gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens]
Length = 701
Score = 202 bits (513), Expect = 1e-51
Identities = 144/446 (32%), Positives = 219/446 (49%), Gaps = 70/446 (15%)
Query: 236 QENGIEICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCN 295
QE G +IC+ ++ +C + C + H LPY WQ KW+ + D+ E +E YCN
Sbjct: 269 QEEGDQICLYHIRKSCSFQDKCHRVHFHLPYRWQF--LDRGKWEDL--DNMELIEEAYCN 324
Query: 296 PENDRMRMKYGGQEFWA---DLNAMNVYETTEFDQLRRLSTPPSSNV--NSIYHTVWKFF 350
P+ +R+ F + + NAM T Q RRLST S + I T W ++
Sbjct: 325 PKIERILCSESASTFHSHCLNFNAMTYGAT----QARRLSTASSVTKPPHFILTTDWIWY 380
Query: 351 CRDHFG-WREYP-ESVIRLIEEANSRGLKE----------------VRFMMWNNHYILHN 392
D FG W+EY + + + +S +++ ++F ++Y L
Sbjct: 381 WSDEFGSWQEYGRQGTVHPVTTVSSSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDF 440
Query: 393 SFF---------RREIKRRPLFRSCFILLPYLQTLGGVPTQAPPPLEATSSSQIICPDGV 443
F +++ RRP + S P + T+ C
Sbjct: 441 KAFVQKNLVYGTTKKVCRRPKYVS--------------------PQDVTTMQT--CNTKF 478
Query: 444 TSANFYPETWVYMH-PSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQF 502
P+ W P F ++ +S+ + Y+ ++NLF++T+P Y + +I RVQN
Sbjct: 479 PGPKSIPDYWDSSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPF--YFVQKIERVQNLA 536
Query: 503 LWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQG 562
LWE Y+ +K M ++ G+ ++ER LFHGTS VD IC+ NFD RVCG H T +G+G
Sbjct: 537 LWEVYQWQKGQMQKQNGGK--AVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTSYGKG 594
Query: 563 SYFAKKASYSHNFSKKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPVNPGSVTSDLYDSC 622
SYFA+ A+YSH++SK ++ H MFLA+VL G + G+ RPP S + YDSC
Sbjct: 595 SYFARDAAYSHHYSKSDTQ-THTMFLARVLVGEFVRGNASFVRPPAKEGWS--NAFYDSC 651
Query: 623 VDNFFEPQIFVIFNDDQSYPYFVIQY 648
V++ +P IFVIF Q YP +VIQY
Sbjct: 652 VNSVSDPSIFVIFEKHQVYPEYVIQY 677
>gi|22749259 poly (ADP-ribose) polymerase family, member 15 isoform
2 [Homo sapiens]
Length = 444
Score = 140 bits (352), Expect = 5e-33
Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 10/208 (4%)
Query: 443 VTSANFYPETWVYMHPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQF 502
+T+ N PE W M+ Q F V + Y I + F +T Y I +I R+QN F
Sbjct: 243 MTTCNL-PEHWTDMN-HQLFCMVQLEPGQSEYNTIKDKFTRTCSS--YAIEKIERIQNAF 298
Query: 503 LWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQG 562
LW+ Y+ KK M+ K D NER LFHGT D V + +H F+ GK+A +G+G
Sbjct: 299 LWQSYQVKKRQMDIK---NDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAVSYGKG 355
Query: 563 SYFAKKASYS--HNFSKKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPVNPGSVTSDLYD 620
+YFA ASYS +SK S G M++ +VLTG +T G G+ PPP NP + T DL+D
Sbjct: 356 TYFAVDASYSAKDTYSKPDSNGRKHMYVVRVLTGVFTKGRAGLVTPPPKNPHNPT-DLFD 414
Query: 621 SCVDNFFEPQIFVIFNDDQSYPYFVIQY 648
S +N P++FV+F D+Q+YP ++I +
Sbjct: 415 SVTNNTRSPKLFVVFFDNQAYPEYLITF 442
>gi|165377137 poly (ADP-ribose) polymerase family, member 15 isoform
1 [Homo sapiens]
Length = 678
Score = 140 bits (352), Expect = 5e-33
Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 10/208 (4%)
Query: 443 VTSANFYPETWVYMHPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQF 502
+T+ N PE W M+ Q F V + Y I + F +T Y I +I R+QN F
Sbjct: 477 MTTCNL-PEHWTDMN-HQLFCMVQLEPGQSEYNTIKDKFTRTCSS--YAIEKIERIQNAF 532
Query: 503 LWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQG 562
LW+ Y+ KK M+ K D NER LFHGT D V + +H F+ GK+A +G+G
Sbjct: 533 LWQSYQVKKRQMDIK---NDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAVSYGKG 589
Query: 563 SYFAKKASYS--HNFSKKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPVNPGSVTSDLYD 620
+YFA ASYS +SK S G M++ +VLTG +T G G+ PPP NP + T DL+D
Sbjct: 590 TYFAVDASYSAKDTYSKPDSNGRKHMYVVRVLTGVFTKGRAGLVTPPPKNPHNPT-DLFD 648
Query: 621 SCVDNFFEPQIFVIFNDDQSYPYFVIQY 648
S +N P++FV+F D+Q+YP ++I +
Sbjct: 649 SVTNNTRSPKLFVVFFDNQAYPEYLITF 676
>gi|194328777 poly (ADP-ribose) polymerase family, member 11 [Homo
sapiens]
Length = 338
Score = 138 bits (347), Expect = 2e-32
Identities = 84/218 (38%), Positives = 119/218 (54%), Gaps = 25/218 (11%)
Query: 450 PETWVYMHPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKR 509
P W ++ + +P+ + Y + NLF KT+ + RI +I R+QN LWE + R
Sbjct: 126 PPHWENVNTQVPYQLIPLHNQTHEYNEVANLFGKTMD--RNRIKRIQRIQNLDLWEFFCR 183
Query: 510 KKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFAKKA 569
KK + +K INE+ LFHGTS + V+ IC HNFD R+ G H +FG+G+YFA+ A
Sbjct: 184 KKAQLKKKRGVPQ--INEQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDA 241
Query: 570 SYSHNFSKKSSK--------GVHF-----------MFLAKVLTGRYTMGSHGMRRPPPVN 610
+YS F K K GV MFLA+VL G Y G RPP +
Sbjct: 242 AYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGDSKYMRPPSKD 301
Query: 611 PGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQY 648
V +LYDSCVD+ + P+IFV+F+ +Q YP ++I +
Sbjct: 302 GSYV--NLYDSCVDDTWNPKIFVVFDANQIYPEYLIDF 337
>gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]
Length = 902
Score = 136 bits (343), Expect = 5e-32
Identities = 125/434 (28%), Positives = 187/434 (43%), Gaps = 73/434 (16%)
Query: 241 EICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCNPENDR 300
EIC+D L C C K H LPY WQ+ T W + E +E+ YCNP
Sbjct: 511 EICLDHLCKGCPLNGSCSKVHFHLPYRWQMLIGKT--WTDF--EHMETIEKGYCNPGIHL 566
Query: 301 MRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPSSN--VNSIYHTVWKFFCRDHFG-W 357
+ F V F +RRLSTP S NS++ T W ++ ++ G W
Sbjct: 567 CSVGSYTINF-------RVMSCDSFP-IRRLSTPSSVTKPANSVFTTKWIWYWKNESGTW 618
Query: 358 REYPE------------SVIRLIEEANSRGLKEVRFMMWNNHYILH---------NSFFR 396
+Y E S + + ++ RG+ V F + +Y L S +
Sbjct: 619 IQYGEEKDKRKNSNVDSSYLESLYQSCPRGV--VPFQAGSRNYELSFQGMIQTNIASKTQ 676
Query: 397 REIKRRPLFRSCFILLPYLQTLGGVPTQAPPPLEATSSSQIICPDGVTSANFYPETWVYM 456
+++ RRP F + Y+Q + P P + S +A F P+
Sbjct: 677 KDVIRRPTFVPQW----YVQQMKRGPDHQPAKTSSVS----------LTATFRPQEDFCF 722
Query: 457 HPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNR 516
S+ + + Y + F ++ FK I +I +++N L +K+ KK M
Sbjct: 723 LSSKKYKLSEIHHLHPEYVRVSEHFKASMKNFK--IEKIKKIENSELLDKFTWKKSQMKE 780
Query: 517 KMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFAKKASYSHNFS 576
+ + LF+ TS+ V+ IC +NFD + H +G+G YFAK A YSH
Sbjct: 781 E---------GKLLFYATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNC 831
Query: 577 KKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPVNPGSVTSDLYDSCVDNFFEPQIFVIFN 636
+K V MF+A+VL G++T G+ PPP +DSCVD P +FVIF
Sbjct: 832 PYDAKNV-VMFVAQVLVGKFTEGNITYTSPPP---------QFDSCVDTRSNPSVFVIFQ 881
Query: 637 DDQSYPYFVIQYEE 650
DQ YP +VI+Y E
Sbjct: 882 KDQVYPQYVIEYTE 895
>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
sapiens]
Length = 1801
Score = 131 bits (329), Expect = 2e-30
Identities = 75/203 (36%), Positives = 114/203 (56%), Gaps = 9/203 (4%)
Query: 450 PETWVYMHPSQDFIQVPVSAEDKSYRIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKR 509
P W M Q+F V + D Y + + F++T F RI +I R+QN LW Y+
Sbjct: 1606 PAHWSDMK-QQNFCVVELLPSDPEYNTVASKFNQTCSHF--RIEKIERIQNPDLWNSYQA 1662
Query: 510 KKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFAKKA 569
KK+ M+ K + +NE+ LFHGT V + ++ F+ GK+A +G+G+YFA A
Sbjct: 1663 KKKTMDAK---NGQTMNEKQLFHGTDAGSVPHVNRNGFNRSYAGKNAVAYGKGTYFAVNA 1719
Query: 570 SYSHN--FSKKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPPVNPGSVTSDLYDSCVDNFF 627
+YS N +S+ + G ++ +VLTG YT G+H + PP NP + T DLYD+ DN
Sbjct: 1720 NYSANDTYSRPDANGRKHVYYVRVLTGIYTHGNHSLIVPPSKNPQNPT-DLYDTVTDNVH 1778
Query: 628 EPQIFVIFNDDQSYPYFVIQYEE 650
P +FV F D Q+YP ++I + +
Sbjct: 1779 HPSLFVAFYDYQAYPEYLITFRK 1801
>gi|157738665 poly (ADP-ribose) polymerase family, member 10 [Homo
sapiens]
Length = 1025
Score = 111 bits (278), Expect = 2e-24
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 6/163 (3%)
Query: 491 RILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPR 550
R++++ RV + L ++Y+ +E + ++ +R E+ L+HGT+ V IC H F+
Sbjct: 849 RVVRVERVSHPLLQQQYELYRERLLQRC---ERRPVEQVLYHGTTAPAVPDICAHGFNRS 905
Query: 551 VCGKHATMFGQGSYFAKKASYS--HNFSKKSSKGVHFMFLAKVLTGRYTMGSHGMRRPPP 608
CG++AT++G+G YFA++AS S +S ++ G +F+A+VLTG Y G G+R PP
Sbjct: 906 FCGRNATVYGKGVYFARRASLSVQDRYSPPNADGHKAVFVARVLTGDYGQGRRGLRAPPL 965
Query: 609 VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYEEV 651
PG V YDS VD +P IFVIF+D Q+ P +I E V
Sbjct: 966 RGPGHVLL-RYDSAVDCICQPSIFVIFHDTQALPTHLITCEHV 1007
>gi|226371716 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 69.7 bits (169), Expect = 8e-12
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 491 RILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPR 550
++L++ ++ N+ L ++RKK+ M K+ + ++ R LF + +C+ F
Sbjct: 632 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQP--VSHR-LFQQVPYQFCNVVCRVGFQRM 688
Query: 551 VCGKHATMFGQGSYFAKKASYSHNFSKKSSKG--VHFMFLAKVLTGRYTMGSHGMRRPPP 608
+G G YF K +KK S + ++F A+VLTG + G PPP
Sbjct: 689 YSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPPP 748
Query: 609 VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFV 645
++PG++ D +DS VDN P+ FVIF+ Q+ P ++
Sbjct: 749 LSPGAI--DGHDSVVDNVSSPETFVIFSGMQAIPQYL 783
>gi|226371714 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 69.7 bits (169), Expect = 8e-12
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 491 RILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPR 550
++L++ ++ N+ L ++RKK+ M K+ + ++ R LF + +C+ F
Sbjct: 632 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQP--VSHR-LFQQVPYQFCNVVCRVGFQRM 688
Query: 551 VCGKHATMFGQGSYFAKKASYSHNFSKKSSKG--VHFMFLAKVLTGRYTMGSHGMRRPPP 608
+G G YF K +KK S + ++F A+VLTG + G PPP
Sbjct: 689 YSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPPP 748
Query: 609 VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFV 645
++PG++ D +DS VDN P+ FVIF+ Q+ P ++
Sbjct: 749 LSPGAI--DGHDSVVDNVSSPETFVIFSGMQAIPQYL 783
>gi|226371712 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 69.7 bits (169), Expect = 8e-12
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 491 RILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPR 550
++L++ ++ N+ L ++RKK+ M K+ + ++ R LF + +C+ F
Sbjct: 632 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQP--VSHR-LFQQVPYQFCNVVCRVGFQRM 688
Query: 551 VCGKHATMFGQGSYFAKKASYSHNFSKKSSKG--VHFMFLAKVLTGRYTMGSHGMRRPPP 608
+G G YF K +KK S + ++F A+VLTG + G PPP
Sbjct: 689 YSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPPP 748
Query: 609 VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFV 645
++PG++ D +DS VDN P+ FVIF+ Q+ P ++
Sbjct: 749 LSPGAI--DGHDSVVDNVSSPETFVIFSGMQAIPQYL 783
>gi|226371710 poly (ADP-ribose) polymerase family, member 9 isoform
a [Homo sapiens]
Length = 854
Score = 69.7 bits (169), Expect = 8e-12
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 491 RILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPR 550
++L++ ++ N+ L ++RKK+ M K+ + ++ R LF + +C+ F
Sbjct: 667 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQP--VSHR-LFQQVPYQFCNVVCRVGFQRM 723
Query: 551 VCGKHATMFGQGSYFAKKASYSHNFSKKSSKG--VHFMFLAKVLTGRYTMGSHGMRRPPP 608
+G G YF K +KK S + ++F A+VLTG + G PPP
Sbjct: 724 YSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPPP 783
Query: 609 VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFV 645
++PG++ D +DS VDN P+ FVIF+ Q+ P ++
Sbjct: 784 LSPGAI--DGHDSVVDNVSSPETFVIFSGMQAIPQYL 818
>gi|226371706 poly (ADP-ribose) polymerase family, member 9 isoform
a [Homo sapiens]
Length = 854
Score = 69.7 bits (169), Expect = 8e-12
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 491 RILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPR 550
++L++ ++ N+ L ++RKK+ M K+ + ++ R LF + +C+ F
Sbjct: 667 QVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQP--VSHR-LFQQVPYQFCNVVCRVGFQRM 723
Query: 551 VCGKHATMFGQGSYFAKKASYSHNFSKKSSKG--VHFMFLAKVLTGRYTMGSHGMRRPPP 608
+G G YF K +KK S + ++F A+VLTG + G PPP
Sbjct: 724 YSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLIYVFEAEVLTGFFCQGHPLNIVPPP 783
Query: 609 VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFV 645
++PG++ D +DS VDN P+ FVIF+ Q+ P ++
Sbjct: 784 LSPGAI--DGHDSVVDNVSSPETFVIFSGMQAIPQYL 818
>gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase 2 [Homo sapiens]
Length = 1166
Score = 56.6 bits (135), Expect = 7e-08
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 463 IQVPVSAEDKSYRIIYNLFHKTVPEFK-----------YRILQILRVQNQFLWEKYKRKK 511
I + +S +DK ++ + TV E + Y IL+I +V N+ LWE+Y ++
Sbjct: 954 ILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHRR 1013
Query: 512 EYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHAT---MFGQGSYFAKK 568
+ ++ + NER LFHG+ V+ I FD R HA MFG G YFA+
Sbjct: 1014 KEVSEENHNH---ANERMLFHGSP--FVNAIIHKGFDER----HAYIGGMFGAGIYFAEN 1064
Query: 569 ASYSHNFSKKSSKG----VH-----FMFLAKVLTGRYTMGSH-------GMRRPPPVNPG 612
+S S+ + G VH ++ ++L R T+G M PP +
Sbjct: 1065 SSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHH- 1123
Query: 613 SVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYE 649
SVT V+ + +VI+ +Q+YP ++I Y+
Sbjct: 1124 SVTGR---PSVNGLALAE-YVIYRGEQAYPEYLITYQ 1156
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 48.5 bits (114), Expect = 2e-05
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 54/226 (23%)
Query: 459 SQDFIQVPVSAEDKSYRIIYNLFHKTVPEFK-----------YRILQILRVQNQFLWEKY 507
+Q I + ++ EDK Y+ + T+ E + Y +++I +V N+ L E++
Sbjct: 1103 NQGTILLDLAPEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERF 1162
Query: 508 KRKKEYMNRKMFGRDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHAT---MFGQGSY 564
+++ ++ + NER LFHG+ ++ I FD R HA MFG G Y
Sbjct: 1163 CHRQKEVSEENHNHH---NERMLFHGSP--FINAIIHKGFDER----HAYIGGMFGAGIY 1213
Query: 565 FAKKASYSHNFSKKSSKGVH---------FMFLAKVLTGRYTMG-------SHGMRRPPP 608
FA+ +S S+ + G ++ ++L R T+G + M PP
Sbjct: 1214 FAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTMKMAHAPP 1273
Query: 609 -----VNPGSVTSDLYDSCVDNFFEPQIFVIFNDDQSYPYFVIQYE 649
+ SV Y +VI+ +Q+YP ++I Y+
Sbjct: 1274 GHHSVIGRPSVNGLAYAE----------YVIYRGEQAYPEYLITYQ 1309
>gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]
Length = 699
Score = 48.5 bits (114), Expect = 2e-05
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 241 EICMDFLQGTCIYGRDCLKHHTVLPYHWQIKRTTTQKWQSVFNDSQEHLERFYCNPENDR 300
EIC+D L C C K H LPY WQ+ T W + E +E+ YCNP
Sbjct: 511 EICLDHLCKGCPLNGSCSKVHFHLPYRWQMLIGKT--WTDF--EHMETIEKGYCNPGIHL 566
Query: 301 MRMKYGGQEFWADLNAMNVYETTEFDQLRRLSTPPS--SNVNSIYHTVWKFFCRDHFG-W 357
+ + + M + + +RRLSTP S NS++ T W ++ ++ G W
Sbjct: 567 CSV----GSYTINFRVM----SCDSFPIRRLSTPSSVTKPANSVFTTKWIWYWKNESGTW 618
Query: 358 REYPE 362
+Y E
Sbjct: 619 IQYGE 623
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 35.4 bits (80), Expect = 0.17
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 21/109 (19%)
Query: 236 QENGIEICMDFLQGTCIYGRDCLKHHTVLPYH--WQIKRTTTQKWQSVFND--------- 284
QEN +EIC +L+G C +G C H V P +I+R+ + D
Sbjct: 298 QENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSHLNAIEDASFLYELEI 357
Query: 285 --SQEH-------LERFYCNPENDRMRMKYGGQEFWADLNAMNVYETTE 324
S++H L FY EN + + EF D A+ ET+E
Sbjct: 358 RFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYD-KALTFAETSE 405
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 35.4 bits (80), Expect = 0.17
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 233 HTHQENGIEICMDFLQGTCIYGRDCLKHHTVL 264
H + E+C DFL+G C G C K HT+L
Sbjct: 746 HVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLL 777
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 33.1 bits (74), Expect = 0.83
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 225 ELVNQLQYHTHQENGIEICMDFLQGTCIYGRDCLKHH 261
E +NQ HT + G +IC FL+G CI G C H
Sbjct: 263 EFINQ---HTVEHKGKQICKYFLEGRCIKGDQCKFDH 296
>gi|156523968 poly (ADP-ribose) polymerase family, member 1 [Homo
sapiens]
Length = 1014
Score = 32.3 bits (72), Expect = 1.4
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 475 RIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGT 534
+ + N T + ++ I +++ + ++YK K+ NR++ L+HG+
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRL-----------LWHGS 864
Query: 535 SQDVVDGICKHNFD--PRVCGKHATMFGQGSYFAKKASYSHNFSKKS 579
GI P MFG+G YFA S S N+ S
Sbjct: 865 RTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTS 911
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 32.0 bits (71), Expect = 1.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 320 YETTEFDQLRRLSTPPSSNVNSIYHTVWKFFCRDHFGWREYPESVIRLIEEA 371
Y ++ +RL S +N+++ W FF RDHF + Y E +E+A
Sbjct: 893 YRRRCLNERKRLGIGQSQEMNTLFR-FWSFFLRDHFNKKMYEEFKQLALEDA 943
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 32.0 bits (71), Expect = 1.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 320 YETTEFDQLRRLSTPPSSNVNSIYHTVWKFFCRDHFGWREYPESVIRLIEEA 371
Y ++ +RL S +N+++ W FF RDHF + Y E +E+A
Sbjct: 816 YRRRCLNERKRLGIGQSQEMNTLFR-FWSFFLRDHFNKKMYEEFKQLALEDA 866
>gi|110825963 poly (ADP-ribose) polymerase family, member 2 isoform
2 [Homo sapiens]
Length = 570
Score = 31.6 bits (70), Expect = 2.4
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 521 RDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHAT----MFGQGSYFAKKASYSHNFS 576
R+ + N L+HG+ GI H R+ A MFG+G YFA +S S N+
Sbjct: 404 REDLHNRMLLWHGSRMSNWVGILSHGL--RIAPPEAPITGYMFGKGIYFADMSSKSANYC 461
Query: 577 KKSS-KGVHFMFLAKVLTGR 595
S K + L++V G+
Sbjct: 462 FASRLKNTGLLLLSEVALGQ 481
>gi|110825961 poly (ADP-ribose) polymerase family, member 2 isoform
1 [Homo sapiens]
Length = 583
Score = 31.6 bits (70), Expect = 2.4
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 521 RDRIINERHLFHGTSQDVVDGICKHNFDPRVCGKHAT----MFGQGSYFAKKASYSHNFS 576
R+ + N L+HG+ GI H R+ A MFG+G YFA +S S N+
Sbjct: 417 REDLHNRMLLWHGSRMSNWVGILSHGL--RIAPPEAPITGYMFGKGIYFADMSSKSANYC 474
Query: 577 KKSS-KGVHFMFLAKVLTGR 595
S K + L++V G+
Sbjct: 475 FASRLKNTGLLLLSEVALGQ 494
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 31.6 bits (70), Expect = 2.4
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 101 PPAENNMSVLIPDRTNVGDQIPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQ 160
PPAE + + P + P+ EAP V P P+E S A+ TP
Sbjct: 637 PPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQS-LPAEETPIEET 695
Query: 161 TDLLH-PVSSDVPTSPDCLDK 180
+H P + DVP +DK
Sbjct: 696 LAAVHSPPADDVPAEEASVDK 716
>gi|62955042 PAR-6 beta [Homo sapiens]
Length = 372
Score = 31.2 bits (69), Expect = 3.2
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 75 SRNQSTDENSLHEPMMKKAMEINSSCPPAENNMSV--LIPDRTNVGDQIPEAHPSTEAPE 132
S QSTD + L P +I S P + + +I + V QIP+A P+TE+ E
Sbjct: 264 SSGQSTDNSLLGYPQ-----QIEPSFEPEDEDSEEDDIIIEDNGVPQQIPKAVPNTESLE 318
Query: 133 RVVPI-------QDHSFPSETLS-GTVADSTPAHFQT 161
+ I Q+ PS +S +A S+ F+T
Sbjct: 319 SLTQIELSFESGQNGFIPSNEVSLAAIASSSNTEFET 355
>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
[Homo sapiens]
Length = 914
Score = 30.8 bits (68), Expect = 4.1
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 320 YETTEFDQLRRLSTPPSSNVNSIYHTVWKFFCRDHFGWREYPESVIRLIEEA--NSRGLK 377
Y + +RL S +N+++ W FF RDHF + Y E E+A N R
Sbjct: 715 YRRRCLSERKRLGIGQSQEMNTLFR-FWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGL 773
Query: 378 EVRFMMWNNHYILHNSFFRREI 399
E F ++ Y L FRREI
Sbjct: 774 ECLFRFYS--YGLEKK-FRREI 792
>gi|37574618 hemogen [Homo sapiens]
Length = 484
Score = 30.8 bits (68), Expect = 4.1
Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 36/197 (18%)
Query: 41 KKKDQKRLGTGTLRSLRPILNTLLESGSLDGVFRSRNQSTDENSLHEPMMKKAMEINSSC 100
KK+ Q+R G G R R R Q+T+ +P ++K + +
Sbjct: 61 KKRKQQRTGKGNRRG------------------RKRQQNTELKVEPQPQIEKEIVEKALA 102
Query: 101 PPAENNMSVLIPDRTNVGDQIPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQ 160
P I +T I + PS +P++VVP + F + + +Q
Sbjct: 103 P---------IEKKTEPPGSITKVFPSVASPQKVVP--EEHFSEICQESNIYQENFSEYQ 151
Query: 161 TDLLHPVSSDVPTSPDCLDKVIDYVPGIFQENSFTIQYILDTSDKLSTELFQDKSEEASL 220
+ SS+ + + + D P ++QE I + D S K+ ++ + + +
Sbjct: 152 EIAVQNHSSE---TCQHVSEPEDLSPKMYQE----ISVLQDNSSKICQDMKEPEDNSPNT 204
Query: 221 DLVFELVNQLQYHTHQE 237
V ++ + +Q+
Sbjct: 205 CQVISVIQDHPFKMYQD 221
>gi|37574622 hemogen [Homo sapiens]
Length = 484
Score = 30.8 bits (68), Expect = 4.1
Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 36/197 (18%)
Query: 41 KKKDQKRLGTGTLRSLRPILNTLLESGSLDGVFRSRNQSTDENSLHEPMMKKAMEINSSC 100
KK+ Q+R G G R R R Q+T+ +P ++K + +
Sbjct: 61 KKRKQQRTGKGNRRG------------------RKRQQNTELKVEPQPQIEKEIVEKALA 102
Query: 101 PPAENNMSVLIPDRTNVGDQIPEAHPSTEAPERVVPIQDHSFPSETLSGTVADSTPAHFQ 160
P I +T I + PS +P++VVP + F + + +Q
Sbjct: 103 P---------IEKKTEPPGSITKVFPSVASPQKVVP--EEHFSEICQESNIYQENFSEYQ 151
Query: 161 TDLLHPVSSDVPTSPDCLDKVIDYVPGIFQENSFTIQYILDTSDKLSTELFQDKSEEASL 220
+ SS+ + + + D P ++QE I + D S K+ ++ + + +
Sbjct: 152 EIAVQNHSSE---TCQHVSEPEDLSPKMYQE----ISVLQDNSSKICQDMKEPEDNSPNT 204
Query: 221 DLVFELVNQLQYHTHQE 237
V ++ + +Q+
Sbjct: 205 CQVISVIQDHPFKMYQD 221
>gi|61969666 arginine-fifty homeobox [Homo sapiens]
Length = 315
Score = 30.8 bits (68), Expect = 4.1
Identities = 26/94 (27%), Positives = 39/94 (41%)
Query: 133 RVVPIQDHSFPSETLSGTVADSTPAHFQTDLLHPVSSDVPTSPDCLDKVIDYVPGIFQEN 192
+V+P QD + PS TL + S L P S+D PTS + +
Sbjct: 24 KVIPPQDPASPSFTLLSKLECSGTVSAYCSLNLPGSTDPPTSASRVAATTAIRRRHKERT 83
Query: 193 SFTIQYILDTSDKLSTELFQDKSEEASLDLVFEL 226
SFT Q + S +F D++ + L L +L
Sbjct: 84 SFTHQQYEELEALFSQTMFPDRNLQEKLALRLDL 117
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,531,792
Number of Sequences: 37866
Number of extensions: 1294569
Number of successful extensions: 3535
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3468
Number of HSP's gapped (non-prelim): 53
length of query: 657
length of database: 18,247,518
effective HSP length: 109
effective length of query: 548
effective length of database: 14,120,124
effective search space: 7737827952
effective search space used: 7737827952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.