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Search of human proteins with 124107616
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|124107616 claudin 23 [Homo sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|124107616 claudin 23 [Homo sapiens] 610 e-175
gi|11141861 claudin 9 [Homo sapiens] 86 3e-17
gi|4502877 claudin 4 [Homo sapiens] 76 3e-14
gi|153792768 claudin 6 [Homo sapiens] 73 3e-13
gi|153792186 claudin 7 [Homo sapiens] 68 8e-12
gi|225703142 claudin 14 [Homo sapiens] 67 1e-11
gi|21536294 claudin 14 [Homo sapiens] 67 1e-11
gi|225703138 claudin 14 [Homo sapiens] 67 1e-11
gi|6912314 claudin 14 [Homo sapiens] 67 1e-11
gi|225703140 claudin 14 [Homo sapiens] 67 1e-11
gi|10863887 claudin 1 [Homo sapiens] 67 2e-11
gi|4502875 claudin 3 [Homo sapiens] 66 3e-11
gi|6912316 claudin 17 [Homo sapiens] 66 3e-11
gi|7656981 claudin 15 [Homo sapiens] 66 3e-11
gi|9966781 claudin 2 [Homo sapiens] 64 1e-10
gi|183979973 claudin 19 isoform a [Homo sapiens] 61 1e-09
gi|183979975 claudin 19 isoform b [Homo sapiens] 60 2e-09
gi|169166402 PREDICTED: claudin-24-like [Homo sapiens] 59 4e-09
gi|169167239 PREDICTED: claudin-24-like [Homo sapiens] 59 5e-09
gi|169166931 PREDICTED: claudin-24-like [Homo sapiens] 59 5e-09
gi|40788011 claudin 8 [Homo sapiens] 57 2e-08
gi|50345279 claudin 18 isoform 2 [Homo sapiens] 56 4e-08
gi|157820127 claudin-like [Homo sapiens] 54 1e-07
gi|162417973 claudin 22 [Homo sapiens] 54 2e-07
gi|195947374 claudin 5 [Homo sapiens] 52 5e-07
gi|195947372 claudin 5 [Homo sapiens] 52 5e-07
gi|7705961 claudin 18 isoform 1 [Homo sapiens] 52 5e-07
gi|47716519 claudin 20 [Homo sapiens] 49 4e-06
gi|33598916 claudin 10 isoform a [Homo sapiens] 44 2e-04
gi|231569235 claudin 10 isoform a_i1 [Homo sapiens] 43 4e-04
>gi|124107616 claudin 23 [Homo sapiens]
Length = 292
Score = 610 bits (1574), Expect = e-175
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRE 60
MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRE
Sbjct: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRE 60
Query: 61 RECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQDEPNFVLAGLSGVV 120
RECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQDEPNFVLAGLSGVV
Sbjct: 61 RECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQDEPNFVLAGLSGVV 120
Query: 121 LFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALS 180
LFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALS
Sbjct: 121 LFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALS 180
Query: 181 FAPWCDERCRRRRKGPSAGPRRSSVSTIQVEWPEPDLAPAIKYYSDGQHRPPPAQHRKPK 240
FAPWCDERCRRRRKGPSAGPRRSSVSTIQVEWPEPDLAPAIKYYSDGQHRPPPAQHRKPK
Sbjct: 181 FAPWCDERCRRRRKGPSAGPRRSSVSTIQVEWPEPDLAPAIKYYSDGQHRPPPAQHRKPK 240
Query: 241 PKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHPCDSSLPCDSDL 292
PKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHPCDSSLPCDSDL
Sbjct: 241 PKPKVGFPMPRPRPKAYTNSVDVLDGEGWESQDAPSCSTHPCDSSLPCDSDL 292
>gi|11141861 claudin 9 [Homo sapiens]
Length = 217
Score = 86.3 bits (212), Expect = 3e-17
Identities = 74/206 (35%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE--LYQGLWDMCREQSSRERECGQT 66
LGM LA G L L P W+ V F+ + V +++GLW C QS+ + +C
Sbjct: 9 LGMTLAVLGWLGTLVSCALPLWK-VTAFIGNSIVVAQVVWEGLWMSCVVQSTGQMQCKVY 67
Query: 67 DQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCW---QDE---PNFVLAGLSGVV 120
D Q + ARAL V +L +LGLL+A G +C +DE VL +GV+
Sbjct: 68 DSLLALP-QDLQAARALCVIALLLALLGLLVAITGAQCTTCVEDEGAKARIVLT--AGVI 124
Query: 121 LFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALS 180
L +AG+L LIPV W H + P A + ++ SL LG+ + LL+LGG L +
Sbjct: 125 LLLAGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGGLLCCT 184
Query: 181 FAPWCDERCRRRRKGPSAGPRRSSVS 206
P ER R R G S P RS S
Sbjct: 185 CPPPQVERPRGPRLGYSI-PSRSGAS 209
>gi|4502877 claudin 4 [Homo sapiens]
Length = 209
Score = 76.3 bits (186), Expect = 3e-14
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Query: 6 VMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE--LYQGLWDMCREQSSREREC 63
+ +G+ LA G L + P WR V F+ + +++GLW C QS+ + +C
Sbjct: 6 LQVMGIALAVLGWLAVMLCCALPMWR-VTAFIGSNIVTSQTIWEGLWMNCVVQSTGQMQC 64
Query: 64 GQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLG---VRCWQDEPNFVLAGL-SGV 119
D Q + ARAL++ S+ LG+LL+ +G C +DE + +GV
Sbjct: 65 KVYDSLLALP-QDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDESAKAKTMIVAGV 123
Query: 120 VLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLAL 179
V +AGL+ ++PVSW H + P AS ++ SL +G+ S LLLLGG L
Sbjct: 124 VFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGGLLCC 183
Query: 180 SFAPWCDE 187
+ P D+
Sbjct: 184 NCPPRTDK 191
>gi|153792768 claudin 6 [Homo sapiens]
Length = 220
Score = 73.2 bits (178), Expect = 3e-13
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE--LYQGLWDMCREQSS 58
M + + LG+VL G + L P W+ V F+ + V +++GLW C QS+
Sbjct: 1 MASAGMQILGVVLTLLGWVNGLVSCALPMWK-VTAFIGNSIVVAQVVWEGLWMSCVVQST 59
Query: 59 RERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCW----QDEPNFVLA 114
+ +C D Q + ARAL V +L + GLL+ G +C + + L
Sbjct: 60 GQMQCKVYDSLLALP-QDLQAARALCVIALLVALFGLLVYLAGAKCTTCVEEKDSKARLV 118
Query: 115 GLSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
SG+V ++G+L LIPV W H + P A ++ SL LG+ S LLLLGG
Sbjct: 119 LTSGIVFVISGVLTLIPVCWTAHAIIRDFYNPLVAEAQKRELGASLYLGWAASGLLLLGG 178
>gi|153792186 claudin 7 [Homo sapiens]
Length = 211
Score = 68.2 bits (165), Expect = 8e-12
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE-LYQGLWDMCREQSSRERECGQTD 67
LG +A G + + T P W++ + + + +Y+GLW C QS+ C D
Sbjct: 9 LGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCKMYD 68
Query: 68 QWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ-------DEPNFVLAGLSGVV 120
A + RALMV SL L + +A++G++C + + + G G++
Sbjct: 69 SVLALSAA-LQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGG--GII 125
Query: 121 LFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALS 180
VAGL L+ SWY H + P + + + ++ +G+ GS L++LGG L+ S
Sbjct: 126 FIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGALLSCS 185
>gi|225703142 claudin 14 [Homo sapiens]
Length = 239
Score = 67.4 bits (163), Expect = 1e-11
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGF-LNQPVDVELYQGLWDMCREQSSR 59
M + V LG +L+ G++ L T+ P WR N V +GLW C S+
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 60 ERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ----DEPNFVLAG 115
+C Q + Q + ARALMV S + + A +G++C + A
Sbjct: 61 IYQC-QIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAI 119
Query: 116 LSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGF 175
L G + +AGLL ++ VSW + + P S + ++ +L LG++ S L L+GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 176 SLALSFAPWCDERCRRRRKGPSAGPRRSSVST 207
L LS C + R P P R++ +T
Sbjct: 180 LLCLS----CQDEAPYR---PYQAPPRATTTT 204
>gi|21536294 claudin 14 [Homo sapiens]
Length = 239
Score = 67.4 bits (163), Expect = 1e-11
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGF-LNQPVDVELYQGLWDMCREQSSR 59
M + V LG +L+ G++ L T+ P WR N V +GLW C S+
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 60 ERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ----DEPNFVLAG 115
+C Q + Q + ARALMV S + + A +G++C + A
Sbjct: 61 IYQC-QIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAI 119
Query: 116 LSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGF 175
L G + +AGLL ++ VSW + + P S + ++ +L LG++ S L L+GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 176 SLALSFAPWCDERCRRRRKGPSAGPRRSSVST 207
L LS C + R P P R++ +T
Sbjct: 180 LLCLS----CQDEAPYR---PYQAPPRATTTT 204
>gi|225703138 claudin 14 [Homo sapiens]
Length = 239
Score = 67.4 bits (163), Expect = 1e-11
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGF-LNQPVDVELYQGLWDMCREQSSR 59
M + V LG +L+ G++ L T+ P WR N V +GLW C S+
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 60 ERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ----DEPNFVLAG 115
+C Q + Q + ARALMV S + + A +G++C + A
Sbjct: 61 IYQC-QIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAI 119
Query: 116 LSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGF 175
L G + +AGLL ++ VSW + + P S + ++ +L LG++ S L L+GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 176 SLALSFAPWCDERCRRRRKGPSAGPRRSSVST 207
L LS C + R P P R++ +T
Sbjct: 180 LLCLS----CQDEAPYR---PYQAPPRATTTT 204
>gi|6912314 claudin 14 [Homo sapiens]
Length = 239
Score = 67.4 bits (163), Expect = 1e-11
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGF-LNQPVDVELYQGLWDMCREQSSR 59
M + V LG +L+ G++ L T+ P WR N V +GLW C S+
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 60 ERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ----DEPNFVLAG 115
+C Q + Q + ARALMV S + + A +G++C + A
Sbjct: 61 IYQC-QIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAI 119
Query: 116 LSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGF 175
L G + +AGLL ++ VSW + + P S + ++ +L LG++ S L L+GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 176 SLALSFAPWCDERCRRRRKGPSAGPRRSSVST 207
L LS C + R P P R++ +T
Sbjct: 180 LLCLS----CQDEAPYR---PYQAPPRATTTT 204
>gi|225703140 claudin 14 [Homo sapiens]
Length = 239
Score = 67.4 bits (163), Expect = 1e-11
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGF-LNQPVDVELYQGLWDMCREQSSR 59
M + V LG +L+ G++ L T+ P WR N V +GLW C S+
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 60 ERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ----DEPNFVLAG 115
+C Q + Q + ARALMV S + + A +G++C + A
Sbjct: 61 IYQC-QIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAI 119
Query: 116 LSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGF 175
L G + +AGLL ++ VSW + + P S + ++ +L LG++ S L L+GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 176 SLALSFAPWCDERCRRRRKGPSAGPRRSSVST 207
L LS C + R P P R++ +T
Sbjct: 180 LLCLS----CQDEAPYR---PYQAPPRATTTT 204
>gi|10863887 claudin 1 [Homo sapiens]
Length = 211
Score = 67.0 bits (162), Expect = 2e-11
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE-LYQGLWDMCREQSSRERECGQTD 67
LG +LA G + + T P WR+ + V + +Y+GLW C QS+ + +C D
Sbjct: 9 LGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTGQIQCKVFD 68
Query: 68 QWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ-----DEPNFVLAGLSGVVLF 122
+ + RALMV + V+ + +A++G++C + + +A + G +
Sbjct: 69 SLLNLSST-LQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAVIGGAIFL 127
Query: 123 VAGLLGLIPVSWYNHFLGDRDV--LPAPASPVTVQVSY--SLVLGYLGSCLLLLGGFSLA 178
+AGL L+ +WY G+R V P +PV + + +L G+ + L LLGG L
Sbjct: 128 LAGLAILVATAWY----GNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGALLC 183
Query: 179 LS 180
S
Sbjct: 184 CS 185
>gi|4502875 claudin 3 [Homo sapiens]
Length = 220
Score = 66.2 bits (160), Expect = 3e-11
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 10 GMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPV--DVELYQGLWDMCREQSSRERECGQTD 67
G LA G L + P WR V F+ + +++GLW C QS+ + +C D
Sbjct: 9 GTALAVLGWLGTIVCCALPMWR-VSAFIGSNIITSQNIWEGLWMNCVVQSTGQMQCKVYD 67
Query: 68 QWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRC----WQDEPNFVLAGLSGVVLFV 123
Q + ARAL+V ++ GLL+A +G +C D + ++GV+ +
Sbjct: 68 SLLALP-QDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDDTAKAKITIVAGVLFLL 126
Query: 124 AGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALSFAP 183
A LL L+PVSW + + P ++ L +G+ + L LLGG L S P
Sbjct: 127 AALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGALLCCSCPP 186
>gi|6912316 claudin 17 [Homo sapiens]
Length = 224
Score = 66.2 bits (160), Expect = 3e-11
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 10 GMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDV--ELYQGLWDMCREQSSRERECGQTD 67
G+VL G++ L TL P WR V F+ + V L++GLW C Q+ +C
Sbjct: 10 GLVLGFLGMVGTLATTLLPQWR-VSAFVGSNIIVFERLWEGLWMNCIRQARVRLQCKFYS 68
Query: 68 QWGYFEAQPVL-VARALMVTSLAATVLGLLLASLGVRCWQ-----DEPNFVLAGLSGVVL 121
P L ARALM ++A +++ LL+ G++ Q + L G SGV+
Sbjct: 69 S--LLALPPALETARALMCVAVALSLIALLIGICGMKQVQCTGSNERAKAYLLGTSGVLF 126
Query: 122 FVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALSF 181
+ G+ LIPVSW + + PA ++ +L LG+ + +L +GG L F
Sbjct: 127 ILTGIFVLIPVSWTANIIIRDFYNPAIHIGQKRELGAALFLGWASAAVLFIGG-GLLCGF 185
Query: 182 APWCDERCRRRRKG 195
C C R+++G
Sbjct: 186 C--C---CNRKKQG 194
>gi|7656981 claudin 15 [Homo sapiens]
Length = 228
Score = 66.2 bits (160), Expect = 3e-11
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 26/216 (12%)
Query: 6 VMTLGMVLAPCGLLLNLTGTLAPG--WRLVKGFLNQPVDVELYQGLWDMCREQSSREREC 63
V T G +A GLL+ G P WR+ N +++ LW C S C
Sbjct: 5 VETFGFFMATVGLLM--LGVTLPNSYWRVSTVHGNVITTNTIFENLWFSCATDSLGVYNC 62
Query: 64 GQTDQW----GYFEAQPVLVARALMVTSLAATVLGLLLASLGVRC-----WQDEPNFVLA 114
+ GY +A RALM+T++ LGLLL G+RC + LA
Sbjct: 63 WEFPSMLALSGYIQA-----CRALMITAILLGFLGLLLGIAGLRCTNIGGLELSRKAKLA 117
Query: 115 GLSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
+G + +AG+ G++ +SWY F RD ++ +L LG+ S + +LGG
Sbjct: 118 ATAGALHILAGICGMVAISWY-AFNITRDFFDPLYPGTKYELGPALYLGWSASLISILGG 176
Query: 175 FSLALSFAPWCDERCRRRRKGPSAGPRRSSVSTIQV 210
L C C + P+A RR + + V
Sbjct: 177 LCL-------CSACCCGSDEDPAASARRPYQAPVSV 205
>gi|9966781 claudin 2 [Homo sapiens]
Length = 230
Score = 64.3 bits (155), Expect = 1e-10
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPV--DVELYQGLWDMCREQSSRERECGQT 66
+G +L GLL L L P W+ ++ + V +GLW C S+ +C
Sbjct: 9 VGYILGLLGLLGTLVAMLLPSWK-TSSYVGASIVTAVGFSKGLWMECATHSTGITQC--- 64
Query: 67 DQWGYFEAQP--VLVARALMVTSLAATVLGLLLASLGVRCW----QDEPNFVLAGLSGVV 120
D + P + A+A+MVTS A + L +++ +G+RC + +A GV
Sbjct: 65 DIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVAGGVF 124
Query: 121 LFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALS 180
+ GLLG IPV+W H + P + ++ +L LG + S L+ G L S
Sbjct: 125 FILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGIILCFS 184
>gi|183979973 claudin 19 isoform a [Homo sapiens]
Length = 224
Score = 60.8 bits (146), Expect = 1e-09
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPV--DVELYQGLWDMCREQSSRERECGQT 66
LG LA G + + T P W+ + + V LY+GLW C QS+ + +C
Sbjct: 9 LGYFLALGGWVGIIASTALPQWKQ-SSYAGDAIITAVGLYEGLWMSCASQSTGQVQCKLY 67
Query: 67 DQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ-DEPNFVLAG---LSGVVLF 122
D + + ARALMV ++ + ++L+ +G++C + + N + G ++G LF
Sbjct: 68 DSLLALDGH-IQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPIAKGRVAIAGGALF 126
Query: 123 V-AGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALSF 181
+ AGL L VSWY + P+ + +L +G+ + L +LGG L +
Sbjct: 127 ILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGSFLCCT- 185
Query: 182 APWCDERCRRR------RKGPSAGPRRSSV 205
C E R R GPSA R V
Sbjct: 186 ---CPEPERPNSSPQPYRPGPSAAAREPVV 212
>gi|183979975 claudin 19 isoform b [Homo sapiens]
Length = 211
Score = 60.5 bits (145), Expect = 2e-09
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPV--DVELYQGLWDMCREQSSRERECGQT 66
LG LA G + + T P W+ + + V LY+GLW C QS+ + +C
Sbjct: 9 LGYFLALGGWVGIIASTALPQWKQ-SSYAGDAIITAVGLYEGLWMSCASQSTGQVQCKLY 67
Query: 67 DQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ-DEPNFVLAG---LSGVVLF 122
D + + ARALMV ++ + ++L+ +G++C + + N + G ++G LF
Sbjct: 68 DSLLALDGH-IQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPIAKGRVAIAGGALF 126
Query: 123 V-AGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFSLALSF 181
+ AGL L VSWY + P+ + +L +G+ + L +LGG L +
Sbjct: 127 ILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGSFLCCT- 185
Query: 182 APWCDERCRRR------RKGPSAGPR 201
C E R R GPSA R
Sbjct: 186 ---CPEPERPNSSPQPYRPGPSAAAR 208
>gi|169166402 PREDICTED: claudin-24-like [Homo sapiens]
Length = 220
Score = 59.3 bits (142), Expect = 4e-09
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 6 VMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRERECGQ 65
+ ++G++L+ G +L++ T P W+ + LN+ + + GLW C Q +C
Sbjct: 9 MQSVGLLLSLLGWILSIITTYLPHWKNLNLDLNEMENWTM--GLWQTCVIQEEVGMQCKD 66
Query: 66 TDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCW-----QDEPNFVLAGLSGVV 120
D + A+ + V+R LM S LGLL++ G+ C Q + L L G++
Sbjct: 67 FDSFLALPAE-LRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGGIL 125
Query: 121 LFVAGLLGLIPVSWYNH----FLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
+ +G+ L+PVSW H D +V P + +L LG+ LLLGG
Sbjct: 126 SWASGITALVPVSWVAHKTVQEFWDENV---PDFVPRWEFGEALFLGWFAGLSLLLGG 180
>gi|169167239 PREDICTED: claudin-24-like [Homo sapiens]
Length = 220
Score = 58.9 bits (141), Expect = 5e-09
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 6 VMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRERECGQ 65
+ ++G++L+ G +L++ T P W+ + LN+ + + GLW C Q +C
Sbjct: 9 MQSVGLLLSFLGWILSIITTYLPHWKNLNLDLNEMENWTM--GLWQTCVIQEEVGMQCKD 66
Query: 66 TDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCW-----QDEPNFVLAGLSGVV 120
D + A+ + V+R LM S LGLL++ G+ C Q + L L G++
Sbjct: 67 FDSFLALPAE-LRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGGIL 125
Query: 121 LFVAGLLGLIPVSWYNH----FLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
+ +G+ L+PVSW H D +V P + +L LG+ LLLGG
Sbjct: 126 SWASGITALVPVSWVAHKTVQEFWDENV---PDFVPRWEFGEALFLGWFAGLSLLLGG 180
>gi|169166931 PREDICTED: claudin-24-like [Homo sapiens]
Length = 220
Score = 58.9 bits (141), Expect = 5e-09
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 6 VMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRERECGQ 65
+ ++G++L+ G +L++ T P W+ + LN+ + + GLW C Q +C
Sbjct: 9 MQSVGLLLSFLGWILSIITTYLPHWKNLNLDLNEMENWTM--GLWQTCVIQEEVGMQCKD 66
Query: 66 TDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCW-----QDEPNFVLAGLSGVV 120
D + A+ + V+R LM S LGLL++ G+ C Q + L L G++
Sbjct: 67 FDSFLALPAE-LRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGGIL 125
Query: 121 LFVAGLLGLIPVSWYNH----FLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
+ +G+ L+PVSW H D +V P + +L LG+ LLLGG
Sbjct: 126 SWASGITALVPVSWVAHKTVQEFWDENV---PDFVPRWEFGEALFLGWFAGLSLLLGG 180
>gi|40788011 claudin 8 [Homo sapiens]
Length = 225
Score = 57.0 bits (136), Expect = 2e-08
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDV--ELYQGLWDMCREQSS 58
M T + G+ L G++ + T+ P WR V F+ + V ++GLW C Q++
Sbjct: 1 MATHALEIAGLFLGGVGMVGTVAVTVMPQWR-VSAFIENNIVVFENFWEGLWMNCVRQAN 59
Query: 59 RERECGQTDQWGYFEAQPVL-VARALMVTSLAATVLGLLLASLGVRCWQ-----DEPNFV 112
+C D P L AR LM + + L ++A LG++C + ++
Sbjct: 60 IRMQCKIYDS--LLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAH 117
Query: 113 LAGLSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTV-QVSYSLVLGYLGSCLLL 171
+ +G++ + G++ LIPVSW + + RD + + ++ +L LG+ + +L+
Sbjct: 118 ILLTAGIIFIITGMVVLIPVSWVANAI-IRDFYNSIVNVAQKRELGEALYLGWTTALVLI 176
Query: 172 LGGFSLALSFAPWCDER 188
+GG F C+E+
Sbjct: 177 VGGALFCCVFC--CNEK 191
>gi|50345279 claudin 18 isoform 2 [Homo sapiens]
Length = 261
Score = 55.8 bits (133), Expect = 4e-08
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 9 LGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRERECGQTDQ 68
LG V++ G+ + T W + N V YQGLW C +SS EC
Sbjct: 9 LGFVVSLIGIAGIIAATCMDQWSTQDLYNNPVTAVFNYQGLWRSCVRESSGFTECR---- 64
Query: 69 WGYFE--AQPVLV--ARALMVTSLAATVLGLLLASLGVRC-----WQDEPNFVLAGLSGV 119
GYF P ++ RALM+ + +GLL++ ++C +D + SG+
Sbjct: 65 -GYFTLLGLPAMLQAVRALMIVGIVLGAIGLLVSIFALKCIRIGSMEDSAKANMTLTSGI 123
Query: 120 VLFVAGLLGLIPVSWY------NHFLGDRDVLPAPASPV-TVQVSY----SLVLGYLGSC 168
+ V+GL + VS + N ++ ++ V TVQ Y +L +G++
Sbjct: 124 MFIVSGLCAIAGVSVFANMLVTNFWMSTANMYTGMGGMVQTVQTRYTFGAALFVGWVAGG 183
Query: 169 LLLLGGFSLALS 180
L L+GG + ++
Sbjct: 184 LTLIGGVMMCIA 195
>gi|157820127 claudin-like [Homo sapiens]
Length = 229
Score = 54.3 bits (129), Expect = 1e-07
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 23/184 (12%)
Query: 10 GMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELY-QGLWDMCREQSSRERECGQTDQ 68
G++L+ G + + T+ P W+ + LN+ +E + G+W++C ++ C +
Sbjct: 13 GLLLSLLGWVCSCVTTILPQWKTLNLELNE---METWIMGIWEVCVDREEVATVCKAFES 69
Query: 69 WGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ-DEPNFVL---AGLSGVVLFV- 123
+ Q + VAR LMV S +LGLLL S G C+Q +V GL G L
Sbjct: 70 FLSLP-QELQVARILMVASHGLGLLGLLLCSFGSECFQFHRIRWVFKRRLGLLGRTLEAS 128
Query: 124 AGLLGLIPVSWYNH-----FLGDR--DVLPAPASPVTVQVSYSLVLGYLGSCLLLLGGFS 176
A L+PVSW H F D D++P + +L LG+ L LGG
Sbjct: 129 ASATTLLPVSWVAHATIQDFWDDSIPDIIP------RWEFGGALYLGWAAGIFLALGGLL 182
Query: 177 LALS 180
L S
Sbjct: 183 LIFS 186
>gi|162417973 claudin 22 [Homo sapiens]
Length = 220
Score = 53.5 bits (127), Expect = 2e-07
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 5 VVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRERECG 64
V G+ L+ G +L+ P W+ + LN+ + + GLW C Q +C
Sbjct: 8 VAQLAGVSLSLLGWVLSCLTNYLPHWKNLNLDLNEMENWTM--GLWQTCVIQEEVGMQCK 65
Query: 65 QTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCW-----QDEPNFVLAGLSGV 119
D + A+ + V+R LM S LGLL++ G+ C Q + L L G+
Sbjct: 66 DFDSFLALPAE-LRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGGI 124
Query: 120 VLFVAGLLGLIPVSWYNH----FLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
+ + +G+ L+PVSW H D +V P + +L LG+ LLLGG
Sbjct: 125 LSWASGVTALVPVSWVAHKTVQEFWDENV---PDFVPRWEFGEALFLGWFAGLSLLLGG 180
>gi|195947374 claudin 5 [Homo sapiens]
Length = 303
Score = 52.4 bits (124), Expect = 5e-07
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 10 GMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE--LYQGLWDMCREQSSRERECGQTD 67
G++LA CGL P W+ V FL+ + ++GLW C QS+ +C D
Sbjct: 105 GLILA-CGL---------PMWQ-VTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYD 153
Query: 68 QWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ---DEPNFVLAGLSGVVLFV- 123
+ V ARAL V+++ + L + G +C P L+G VL++
Sbjct: 154 SVLALSTE-VQAARALTVSAVLLAFVALFVTLAGAQCTTCVAPGPAKARVALTGGVLYLF 212
Query: 124 AGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
GLL L+P+ W+ + + P+ ++ +L +G+ + LL++GG
Sbjct: 213 CGLLALVPLCWFANIVVREFYDPSVPVSQKYELGAALYIGWAATALLMVGG 263
>gi|195947372 claudin 5 [Homo sapiens]
Length = 303
Score = 52.4 bits (124), Expect = 5e-07
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 10 GMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVE--LYQGLWDMCREQSSRERECGQTD 67
G++LA CGL P W+ V FL+ + ++GLW C QS+ +C D
Sbjct: 105 GLILA-CGL---------PMWQ-VTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYD 153
Query: 68 QWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRCWQ---DEPNFVLAGLSGVVLFV- 123
+ V ARAL V+++ + L + G +C P L+G VL++
Sbjct: 154 SVLALSTE-VQAARALTVSAVLLAFVALFVTLAGAQCTTCVAPGPAKARVALTGGVLYLF 212
Query: 124 AGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSYSLVLGYLGSCLLLLGG 174
GLL L+P+ W+ + + P+ ++ +L +G+ + LL++GG
Sbjct: 213 CGLLALVPLCWFANIVVREFYDPSVPVSQKYELGAALYIGWAATALLMVGG 263
>gi|7705961 claudin 18 isoform 1 [Homo sapiens]
Length = 261
Score = 52.4 bits (124), Expect = 5e-07
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 25/200 (12%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELYQGLWDMCREQSSRE 60
M T + +L+ GL + T W + N V Y+GLW C QSS
Sbjct: 1 MSTTTCQVVAFLLSILGLAGCIAATGMDMWSTQDLYDNPVTSVFQYEGLWRSCVRQSSGF 60
Query: 61 RECGQTDQWGYFE--AQPVLV--ARALMVTSLAATVLGLLLASLGVRC-----WQDEPNF 111
EC YF P ++ RALM+ + +GLL++ ++C +D
Sbjct: 61 TECRP-----YFTILGLPAMLQAVRALMIVGIVLGAIGLLVSIFALKCIRIGSMEDSAKA 115
Query: 112 VLAGLSGVVLFVAGLLGLIPVSWY------NHFLGDRDVLPAPASPV-TVQVSY----SL 160
+ SG++ V+GL + VS + N ++ ++ V TVQ Y +L
Sbjct: 116 NMTLTSGIMFIVSGLCAIAGVSVFANMLVTNFWMSTANMYTGMGGMVQTVQTRYTFGAAL 175
Query: 161 VLGYLGSCLLLLGGFSLALS 180
+G++ L L+GG + ++
Sbjct: 176 FVGWVAGGLTLIGGVMMCIA 195
>gi|47716519 claudin 20 [Homo sapiens]
Length = 219
Score = 49.3 bits (116), Expect = 4e-06
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 29/224 (12%)
Query: 1 MRTPVVMTLGMVLAPCGLLLNLTGTLAPGWRLVKGFLNQPVDVELY------QGLWDMCR 54
M + + L +LA G+ LT TL P W++ N VD + GLW C
Sbjct: 1 MASAGLQLLAFILALSGVSGVLTATLLPNWKV-----NVDVDSNIITAIVQLHGLWMDCT 55
Query: 55 EQSSRERECGQTDQWGYFEAQPVLV--ARALMVTSLAATVLGLLLASLGVRCWQ---DEP 109
S+ C + P+ V ARA MV + + LG+ +++G++C + D
Sbjct: 56 WYSTGMFSCALKHS---ILSLPIHVQAARATMVLACVLSALGICTSTVGMKCTRLGGDRE 112
Query: 110 NFVLAGLSGVVLFV-AGLLGLIPVSWY-NHFLGDRDVLPAPASPVTVQVSYSLVLGYLGS 167
A +G V F+ AG+ LI WY + + L P S + ++ +G++ +
Sbjct: 113 TKSHASFAGGVCFMSAGISSLISTVWYTKEIIANFLDLTVPESN-KHEPGGAIYIGFISA 171
Query: 168 CLLLLGGFSLALSFAPWCDERCRRRRKGPSAGPRRSSVSTIQVE 211
LL + G + F C +R R P P + +S Q+E
Sbjct: 172 MLLFISG----MIFCTSCIKRNPEARLDP---PTQQPISNTQLE 208
>gi|33598916 claudin 10 isoform a [Homo sapiens]
Length = 226
Score = 43.5 bits (101), Expect = 2e-04
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 45 LYQGLWDMCREQSSRERECGQTDQWGYFEAQPVLVA-RALMVTSLAATVLGLLLASLGVR 103
+YQGLW C + C + F+ + A R LM+ +++ G + A G++
Sbjct: 43 VYQGLWMNCAGNALGSFHC--RPHFTIFKVAGYIQACRGLMIAAVSLGFFGSIFALFGMK 100
Query: 104 CWQ----DEPNFVLAGLSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSY- 158
C + D+ +A L+G+V ++GL + S Y + + P+ V+ Y
Sbjct: 101 CTKVGGSDKAKAKIACLAGIVFILSGLCSMTGCSLYAN-----KITTEFFDPLFVEQKYE 155
Query: 159 ---SLVLGYLGSCLLLLGGFSLALSFA 182
+L +G+ G+ L ++GG S +
Sbjct: 156 LGAALFIGWAGASLCIIGGVIFCFSIS 182
>gi|231569235 claudin 10 isoform a_i1 [Homo sapiens]
Length = 207
Score = 42.7 bits (99), Expect = 4e-04
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 33/146 (22%)
Query: 45 LYQGLWDMCREQSSRERECGQTDQWGYFEAQPVLVARALMVTSLAATVLGLLLASLGVRC 104
+YQGLW C GY +A R LM+ +++ G + A G++C
Sbjct: 43 VYQGLWMNCA---------------GYIQA-----CRGLMIAAVSLGFFGSIFALFGMKC 82
Query: 105 WQ----DEPNFVLAGLSGVVLFVAGLLGLIPVSWYNHFLGDRDVLPAPASPVTVQVSY-- 158
+ D+ +A L+G+V ++GL + S Y + + P+ V+ Y
Sbjct: 83 TKVGGSDKAKAKIACLAGIVFILSGLCSMTGCSLYAN-----KITTEFFDPLFVEQKYEL 137
Query: 159 --SLVLGYLGSCLLLLGGFSLALSFA 182
+L +G+ G+ L ++GG S +
Sbjct: 138 GAALFIGWAGASLCIIGGVIFCFSIS 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,573,834
Number of Sequences: 37866
Number of extensions: 777179
Number of successful extensions: 3513
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 3309
Number of HSP's gapped (non-prelim): 233
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.