Guide to the Human Genome
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Name: UBA7 Sequence: fasta or formatted (1012aa) NCBI GI: 38045948
Description:

ubiquitin-like modifier activating enzyme 7

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4        105           5
 C cysteine            1.7         17           1
 D aspartate           5.4         55           3
 E glutamate           6.4         65           3
 F phenylalanine       3.8         38           2
 G glycine             6.7         68           2
 H histidine           4.2         42           2
 I isoleucine          2.6         26           2
 K lysine              3.2         32           1
 L leucine            13.5        137           3
 M methionine          1.4         14           1
 N asparagine          1.9         19           1
 P proline             6.4         65           2
 Q glutamine           5.9         60           2
 R arginine            5.3         54           2
 S serine              5.3         54           2
 T threonine           5.0         51           3
 V valine              7.1         72           3
 W tryptophan          1.4         14           1
 Y tyrosine            2.4         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-like modifier activating enzyme 7 
UBA1                  0.414   ubiquitin-activating enzyme E1 
UBA1                  0.414   ubiquitin-activating enzyme E1 
UBA6                  0.276   ubiquitin-activating enzyme E1-like 2 
UBA2                  0.052   SUMO-1 activating enzyme subunit 2 
SAE1                  0.043   SUMO1 activating enzyme subunit 1 isoform c 
SAE1                  0.043   SUMO1 activating enzyme subunit 1 isoform b 
SAE1                  0.043   SUMO1 activating enzyme subunit 1 isoform a 
SAE1                  0.043   SUMO1 activating enzyme subunit 1 isoform a 
UBA3                  0.040   ubiquitin-activating enzyme 3 isoform 2 
UBA3                  0.040   ubiquitin-activating enzyme 3 isoform 1 
NAE1                  0.024   NEDD8 activating enzyme E1 subunit 1 isoform a 
MOCS3                 0.023   molybdenum cofactor synthesis 3 
NAE1                  0.017   NEDD8 activating enzyme E1 subunit 1 isoform b [Homo...
UBA5                  0.012   ubiquitin-activating enzyme 5 isoform 2 
UBA5                  0.012   ubiquitin-activating enzyme 5 isoform 1 
ATG7                  0.006   APG7 autophagy 7-like isoform c 
ATG7                  0.006   APG7 autophagy 7-like isoform b 
ATG7                  0.006   APG7 autophagy 7-like isoform a 
RNF43                 0.004   ring finger protein 43 
ERN2                  0.003   endoplasmic reticulum to nucleus signalling 2 [Homo...
SGIP1                 0.003   SH3-domain GRB2-like (endophilin) interacting prote...
SLITRK5               0.003   SLIT and NTRK-like family, member 5 
MAMSTR                0.003   MEF2 activating motif and SAP domain containing tra...
MAMSTR                0.003   MEF2 activating motif and SAP domain containing tran...
BRPF3                 0.003   bromodomain and PHD finger containing, 3 
PLA2G4D               0.002   phospholipase A2, group IVD 
LOC645937             0.002   PREDICTED: similar to zinc finger protein 598 [Homo...
LOC645937             0.002   PREDICTED: similar to zinc finger protein 598 [Homo...
LOC645937             0.002   PREDICTED: similar to zinc finger protein 598 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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