Guide to the Human Genome
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Name: UBA2 Sequence: fasta or formatted (640aa) NCBI GI: 4885649
Description:

SUMO-1 activating enzyme subunit 2

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         53           2
 C cysteine            1.6         10           1
 D aspartate           8.1         52           2
 E glutamate           7.8         50           3
 F phenylalanine       3.3         21           2
 G glycine             5.5         35           2
 H histidine           1.7         11           1
 I isoleucine          5.9         38           2
 K lysine              7.5         48           2
 L leucine             9.1         58           2
 M methionine          1.7         11           1
 N asparagine          5.0         32           2
 P proline             4.7         30           2
 Q glutamine           4.2         27           2
 R arginine            5.0         32           1
 S serine              6.2         40           2
 T threonine           4.7         30           2
 V valine              7.0         45           2
 W tryptophan          0.9          6           1
 Y tyrosine            1.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SUMO-1 activating enzyme subunit 2 
UBA3                  0.108   ubiquitin-activating enzyme 3 isoform 2 
UBA3                  0.108   ubiquitin-activating enzyme 3 isoform 1 
UBA1                  0.106   ubiquitin-activating enzyme E1 
UBA1                  0.106   ubiquitin-activating enzyme E1 
UBA7                  0.085   ubiquitin-like modifier activating enzyme 7 
UBA6                  0.076   ubiquitin-activating enzyme E1-like 2 
MOCS3                 0.045   molybdenum cofactor synthesis 3 
UBA5                  0.030   ubiquitin-activating enzyme 5 isoform 2 
UBA5                  0.030   ubiquitin-activating enzyme 5 isoform 1 
SAE1                  0.026   SUMO1 activating enzyme subunit 1 isoform c 
SAE1                  0.026   SUMO1 activating enzyme subunit 1 isoform b 
SAE1                  0.026   SUMO1 activating enzyme subunit 1 isoform a 
SAE1                  0.026   SUMO1 activating enzyme subunit 1 isoform a 
NAE1                  0.021   NEDD8 activating enzyme E1 subunit 1 isoform b [Homo...
NAE1                  0.021   NEDD8 activating enzyme E1 subunit 1 isoform a 
ATG7                  0.018   APG7 autophagy 7-like isoform c 
ATG7                  0.018   APG7 autophagy 7-like isoform b 
ATG7                  0.018   APG7 autophagy 7-like isoform a 
RTF1                  0.012   Paf1/RNA polymerase II complex component 
SGOL1                 0.011   shugoshin-like 1 isoform A1 
SGOL1                 0.011   shugoshin-like 1 isoform A2 
PIK3AP1               0.011   phosphoinositide-3-kinase adaptor protein 1 
NEK1                  0.011   NIMA-related kinase 1 
MYT1                  0.010   myelin transcription factor 1 
SRCAP                 0.010   Snf2-related CBP activator protein 
EAPP                  0.009   E2F-associated phosphoprotein 
NSBP1                 0.008   nucleosomal binding protein 1 
PHF14                 0.008   PHD finger protein 14 isoform 2 
PHF14                 0.008   PHD finger protein 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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