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Search of human proteins with 37595530
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
(323 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens] 649 0.0
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 649 0.0
gi|62953127 polyhomeotic 1-like [Homo sapiens] 257 9e-69
gi|148612879 polyhomeotic like 3 [Homo sapiens] 245 4e-65
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens] 80 2e-15
gi|158138528 l(3)mbt-like 4 [Homo sapiens] 74 1e-13
gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens] 74 2e-13
gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens] 74 2e-13
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 74 2e-13
gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens] 65 6e-11
gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens] 65 6e-11
gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens] 64 2e-10
gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens] 64 2e-10
gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens] 64 2e-10
gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens] 61 2e-09
gi|5174669 sex comb on midleg-like 2 [Homo sapiens] 60 2e-09
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 60 2e-09
gi|197927257 sterile alpha motif domain containing 13 isoform 2 ... 60 3e-09
gi|197927255 sterile alpha motif domain containing 13 isoform 2 ... 60 3e-09
gi|58293756 sterile alpha motif domain containing 13 isoform 1 [... 60 3e-09
gi|158508495 sex comb on midleg-like 4 [Homo sapiens] 59 8e-09
gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens] 49 5e-06
gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens] 49 5e-06
gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens] 49 5e-06
gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens] 49 5e-06
gi|154090976 sterile alpha and TIR motif containing 1 [Homo sapi... 39 0.006
gi|38201706 sterile alpha motif domain containing 9 [Homo sapiens] 39 0.008
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 35 0.069
gi|158508476 mbt domain containing 1 [Homo sapiens] 33 0.26
gi|20149698 l(3)mbt-like 2 [Homo sapiens] 33 0.45
>gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
Length = 323
Score = 649 bits (1675), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVG 60
MTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVG
Sbjct: 1 MTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVG 60
Query: 61 NLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFK 120
NLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFK
Sbjct: 61 NLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFK 120
Query: 121 RSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQ 180
RSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQ
Sbjct: 121 RSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQ 180
Query: 181 PTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH 240
PTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH
Sbjct: 181 PTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH 240
Query: 241 MRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLM 300
MRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLM
Sbjct: 241 MRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLM 300
Query: 301 SAMNIKLGPALKIYARISMLKDS 323
SAMNIKLGPALKIYARISMLKDS
Sbjct: 301 SAMNIKLGPALKIYARISMLKDS 323
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 649 bits (1675), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVG 60
MTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVG
Sbjct: 536 MTSGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVG 595
Query: 61 NLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFK 120
NLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFK
Sbjct: 596 NLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFK 655
Query: 121 RSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQ 180
RSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQ
Sbjct: 656 RSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQ 715
Query: 181 PTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH 240
PTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH
Sbjct: 716 PTGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH 775
Query: 241 MRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLM 300
MRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLM
Sbjct: 776 MRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLM 835
Query: 301 SAMNIKLGPALKIYARISMLKDS 323
SAMNIKLGPALKIYARISMLKDS
Sbjct: 836 SAMNIKLGPALKIYARISMLKDS 858
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 257 bits (657), Expect = 9e-69
Identities = 158/318 (49%), Positives = 200/318 (62%), Gaps = 29/318 (9%)
Query: 11 SIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGNLKKKYAQGF 70
++A + Q G++KPPQAIVKPQILTH+IEGFVIQEGAEPFPVG S LL K ++
Sbjct: 711 TLAMVSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQLL------KESEKP 764
Query: 71 LPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLK---LKCELCGRVDFAYKFKRSKRFCS 127
L LP T T+++ P +S K LKCE CG+ A +F+ SKRFCS
Sbjct: 765 LQTGLP----TGLTENQSGGPLGVDSPSAELDKKANLLKCEYCGKYAPAEQFRGSKRFCS 820
Query: 128 MACAKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQPTGTVPL 187
M CAKRYNV C+ + L + Q+A A RR ++S + + + G
Sbjct: 821 MTCAKRYNVSCSHQFRLKRKKMKEFQEANYARVRRRGPRRSS----SDIARAKIQG---- 872
Query: 188 SVTAALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMH--MRDLV 245
+ QEDSSR SDNSSY+E LSP S + R G+RDL P+ +L
Sbjct: 873 ------KCHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRAGHGERDLGNPNTAPPTPELH 926
Query: 246 GMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNI 305
G+ FL S P++W+VE+VYEFI SL GCQEIAEEFR+QEIDGQALLLLKE+HLMSAMNI
Sbjct: 927 GINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNI 986
Query: 306 KLGPALKIYARISMLKDS 323
KLGPALKI A+I++LK++
Sbjct: 987 KLGPALKICAKINVLKET 1004
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 245 bits (625), Expect = 4e-65
Identities = 150/316 (47%), Positives = 195/316 (61%), Gaps = 34/316 (10%)
Query: 21 ENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGNLKKKY---------AQGFL 71
ENKPPQAIVKPQILTHVIEGFVIQEG EPFPV RSSLL+ KK +
Sbjct: 701 ENKPPQAIVKPQILTHVIEGFVIQEGLEPFPVSRSSLLIEQPVKKRPLLDNQVINSVCVQ 760
Query: 72 PEKLPQQDHT-TTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFKRSKRFCSMAC 130
PE H ++D+EME+ +E+ EE LKCE CG++ +A +F RSKRFC+M+C
Sbjct: 761 PELQNNTKHADNSSDTEMEDMIAEETLEEMDSELLKCEFCGKMGYANEFLRSKRFCTMSC 820
Query: 131 AKRYNVGCTKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQPTGTVPLSVT 190
AKRYNV C+K+ L +R ++ H RR S P G +
Sbjct: 821 AKRYNVSCSKKFALSRWNRKPDNQS--LGHRGRRPSG-------------PDGAAREHIL 865
Query: 191 AALQLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMHMRDLVGMGHH 250
L +T+ + D +S+E+ + P + ++ R+ + +R+ EL D+ +R +
Sbjct: 866 RQLPITYPSAEE----DLASHEDSV-PSAMTTRLRRQSERERERELRDVRIRKMPE-NSD 919
Query: 251 FLP---SEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKL 307
LP +EP+ W V+DV+ FI SLPGCQ+IA+EFRAQEIDGQALLLLKEDHLMSAMNIKL
Sbjct: 920 LLPVAQTEPSIWTVDDVWAFIHSLPGCQDIADEFRAQEIDGQALLLLKEDHLMSAMNIKL 979
Query: 308 GPALKIYARISMLKDS 323
GPALKI ARI+ LK+S
Sbjct: 980 GPALKICARINSLKES 995
>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
Length = 446
Score = 80.5 bits (197), Expect = 2e-15
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 236 LPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLK 295
LP H +G G+ L + KW V+DV+ FIRSLPGC + A+ F+ IDG+ L LL
Sbjct: 305 LPGTHALVTIG-GNLSLDEDIQKWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLT 363
Query: 296 EDHLMSAMNIKLGPALKIYARIS 318
E+HL M +KLGPALKI +++S
Sbjct: 364 EEHLRGTMGLKLGPALKIQSQVS 386
>gi|158138528 l(3)mbt-like 4 [Homo sapiens]
Length = 623
Score = 74.3 bits (181), Expect = 1e-13
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 232 RDLELP-DMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQA 290
RDL L + H + L G+ S+ +W V++V EF++SL GC+E A+ F+ ++IDG+A
Sbjct: 516 RDLPLGREQHCKLLPGVAD-IRASQVARWTVDEVAEFVQSLLGCEEHAKCFKKEQIDGKA 574
Query: 291 LLLLKEDHLMSAMNIKLGPALKIYARISMLKDS 323
LLL + ++ M IKLGPALKIY I M + S
Sbjct: 575 FLLLTQTDIVKVMKIKLGPALKIYNSILMFRHS 607
>gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]
Length = 755
Score = 73.9 bits (180), Expect = 2e-13
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 254 SEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI 313
S+ +KW+ ++V EFI+SLPGC+E + F+ ++IDG+A LL+ + ++ M+IKLGPALKI
Sbjct: 678 SKVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKI 737
Query: 314 YARISMLK 321
+ I M K
Sbjct: 738 FNSILMFK 745
>gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]
Length = 780
Score = 73.9 bits (180), Expect = 2e-13
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 254 SEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI 313
S+ +KW+ ++V EFI+SLPGC+E + F+ ++IDG+A LL+ + ++ M+IKLGPALKI
Sbjct: 703 SKVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKI 762
Query: 314 YARISMLK 321
+ I M K
Sbjct: 763 FNSILMFK 770
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 73.6 bits (179), Expect = 2e-13
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 253 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312
P + TKW V+DV F+ L GC E FR Q IDG+ L LL E+HL++ M +KLGPALK
Sbjct: 537 PEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPLLTEEHLLTNMGLKLGPALK 596
Query: 313 IYARIS 318
I A+++
Sbjct: 597 IRAQVA 602
>gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]
Length = 660
Score = 65.5 bits (158), Expect = 6e-11
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 255 EPTKWNVEDVYEFIRSL-PGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI 313
+P+ W VEDV +F+R P A+ FR EIDG+ALLLL+ D +M M +KLGPALK+
Sbjct: 589 DPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKL 648
Query: 314 YARISMLK 321
I LK
Sbjct: 649 SYHIDRLK 656
>gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]
Length = 591
Score = 65.5 bits (158), Expect = 6e-11
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 255 EPTKWNVEDVYEFIRSL-PGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI 313
+P+ W VEDV +F+R P A+ FR EIDG+ALLLL+ D +M M +KLGPALK+
Sbjct: 520 DPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKL 579
Query: 314 YARISMLK 321
I LK
Sbjct: 580 SYHIDRLK 587
>gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens]
Length = 866
Score = 63.9 bits (154), Expect = 2e-10
Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 194 QLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPD--------MHMRDLV 245
+L E S + S +SS + S RR++ R D +R V
Sbjct: 724 ELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEV 783
Query: 246 GMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNI 305
H L S P KW+V DV FIRS C +A F QEIDGQALLLL + M++
Sbjct: 784 AERLH-LDSNPLKWSVADVVRFIRSTD-CAPLARIFLDQEIDGQALLLLTLPTVQECMDL 841
Query: 306 KLGPALKIYARISMLK 321
KLGPA+K+ I +K
Sbjct: 842 KLGPAIKLCHHIERIK 857
>gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens]
Length = 866
Score = 63.9 bits (154), Expect = 2e-10
Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 194 QLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPD--------MHMRDLV 245
+L E S + S +SS + S RR++ R D +R V
Sbjct: 724 ELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEV 783
Query: 246 GMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNI 305
H L S P KW+V DV FIRS C +A F QEIDGQALLLL + M++
Sbjct: 784 AERLH-LDSNPLKWSVADVVRFIRSTD-CAPLARIFLDQEIDGQALLLLTLPTVQECMDL 841
Query: 306 KLGPALKIYARISMLK 321
KLGPA+K+ I +K
Sbjct: 842 KLGPAIKLCHHIERIK 857
>gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens]
Length = 866
Score = 63.9 bits (154), Expect = 2e-10
Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 194 QLTHSQEDSSRCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPD--------MHMRDLV 245
+L E S + S +SS + S RR++ R D +R V
Sbjct: 724 ELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEV 783
Query: 246 GMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNI 305
H L S P KW+V DV FIRS C +A F QEIDGQALLLL + M++
Sbjct: 784 AERLH-LDSNPLKWSVADVVRFIRSTD-CAPLARIFLDQEIDGQALLLLTLPTVQECMDL 841
Query: 306 KLGPALKIYARISMLK 321
KLGPA+K+ I +K
Sbjct: 842 KLGPAIKLCHHIERIK 857
>gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]
Length = 894
Score = 60.8 bits (146), Expect = 2e-09
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 252 LPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPAL 311
L S P +W V DV FI+ L C +A+ F+ Q+IDGQALLLL + M +KLGPA+
Sbjct: 817 LESNPLEWTVTDVVRFIK-LTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAI 875
Query: 312 KIYARISMLK 321
K+ +I +K
Sbjct: 876 KLCHQIERVK 885
>gi|5174669 sex comb on midleg-like 2 [Homo sapiens]
Length = 700
Score = 60.5 bits (145), Expect = 2e-09
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 196 THSQEDSSRCSDNSSYEEPLSPISASSSTSRRR-QGQRDLELPDMHMRDLVGMGHHFLPS 254
T +D SR ++ + IS SS + Q QR E P +
Sbjct: 567 TSVSQDFSRSVPGTTSSPLVGDISPKSSPHEVKFQMQRKSEAPSYIAVPDPSVLKQGFSK 626
Query: 255 EPTKWNVEDVYEFIRSLPG--CQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312
+P+ W+V++V +F++ +A+ FR EIDG+AL LLK D +M M +KLGPALK
Sbjct: 627 DPSTWSVDEVIQFMKHTDPQISGPLADLFRQHEIDGKALFLLKSDVMMKYMGLKLGPALK 686
Query: 313 IYARISMLKD 322
+ I LK+
Sbjct: 687 LCYYIEKLKE 696
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 60.5 bits (145), Expect = 2e-09
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 253 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312
PS+P +W V DV E+ G E A F+ QEIDG++LLL++ +++ ++I+LGPALK
Sbjct: 456 PSDPVEWTVMDVVEYFTEA-GFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALK 514
Query: 313 IY 314
IY
Sbjct: 515 IY 516
>gi|197927257 sterile alpha motif domain containing 13 isoform 2
[Homo sapiens]
Length = 102
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 253 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312
P +P W V DV + R++ G +E A F+ QEIDG++LLL+ + +++ + +KLGPALK
Sbjct: 25 PPDPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALK 83
Query: 313 IY 314
IY
Sbjct: 84 IY 85
>gi|197927255 sterile alpha motif domain containing 13 isoform 2
[Homo sapiens]
Length = 102
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 253 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312
P +P W V DV + R++ G +E A F+ QEIDG++LLL+ + +++ + +KLGPALK
Sbjct: 25 PPDPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALK 83
Query: 313 IY 314
IY
Sbjct: 84 IY 85
>gi|58293756 sterile alpha motif domain containing 13 isoform 1
[Homo sapiens]
Length = 116
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 253 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312
P +P W V DV + R++ G +E A F+ QEIDG++LLL+ + +++ + +KLGPALK
Sbjct: 39 PPDPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALK 97
Query: 313 IY 314
IY
Sbjct: 98 IY 99
>gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
Length = 414
Score = 58.5 bits (140), Expect = 8e-09
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 217 PISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLP--GC 274
P S+ + +G R P +D P+ W VEDV F++
Sbjct: 308 PASSPKRNTTSLEGNRCASSPSQDAQD----ARRPRSRNPSAWTVEDVVWFVKDADPQAL 363
Query: 275 QEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKDS 323
E FR EIDG ALLLLK D +M + +KLGPALK+ I LK +
Sbjct: 364 GPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQA 412
>gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]
Length = 329
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 252 LPSEPTKWNVEDVYEFIRS---LPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLG 308
+ P+ W+VE V F++ L C + + FR+ EIDG+ALLLL D L+ + +KLG
Sbjct: 251 ITKHPSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 309
Query: 309 PALKIYARISMLK 321
A+K+ I LK
Sbjct: 310 TAVKLCYYIDRLK 322
>gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]
Length = 208
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 252 LPSEPTKWNVEDVYEFIRS---LPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLG 308
+ P+ W+VE V F++ L C + + FR+ EIDG+ALLLL D L+ + +KLG
Sbjct: 130 ITKHPSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 188
Query: 309 PALKIYARISMLK 321
A+K+ I LK
Sbjct: 189 TAVKLCYYIDRLK 201
>gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]
Length = 208
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 252 LPSEPTKWNVEDVYEFIRS---LPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLG 308
+ P+ W+VE V F++ L C + + FR+ EIDG+ALLLL D L+ + +KLG
Sbjct: 130 ITKHPSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 188
Query: 309 PALKIYARISMLK 321
A+K+ I LK
Sbjct: 189 TAVKLCYYIDRLK 201
>gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]
Length = 302
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 252 LPSEPTKWNVEDVYEFIRS---LPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLG 308
+ P+ W+VE V F++ L C + + FR+ EIDG+ALLLL D L+ + +KLG
Sbjct: 224 ITKHPSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 282
Query: 309 PALKIYARISMLK 321
A+K+ I LK
Sbjct: 283 TAVKLCYYIDRLK 295
>gi|154090976 sterile alpha and TIR motif containing 1 [Homo
sapiens]
Length = 724
Score = 38.9 bits (89), Expect = 0.006
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 252 LPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPAL 311
LPS P+ W +V +++ + G + E FR Q++DG LL L E+ L + + +K G
Sbjct: 406 LPSVPS-WKEAEVQTWLQQI-GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITR 463
Query: 312 KIYAR 316
K + R
Sbjct: 464 KRFFR 468
>gi|38201706 sterile alpha motif domain containing 9 [Homo sapiens]
Length = 1589
Score = 38.5 bits (88), Expect = 0.008
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 252 LPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPAL 311
LP W EDV +++ S Q+ E Q+++G L LK++HL+ M I GPA+
Sbjct: 7 LPENTDDWTKEDVNQWLESHKIDQKHREILTEQDVNGAVLKWLKKEHLVD-MGITHGPAI 65
Query: 312 KI 313
+I
Sbjct: 66 QI 67
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 35.4 bits (80), Expect = 0.069
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 146 HSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQPTGTVPLSVTAALQLTHSQEDSSRC 205
HS ++ + + +R+RASK+ ++ ++ +P T PL T A Q ++
Sbjct: 544 HSRSRSKSRSSSKSGHRKRASKSPRKTASQLSENKPVKTEPLRATMA------QNENVVV 597
Query: 206 SDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPT 257
+ P+ P+S S SR + GQ+ + ++++ H LP + T
Sbjct: 598 QPVVAENIPVIPLSDSPPPSRWKPGQKPWKPSYERIQEMKAKTTHLLPIQST 649
>gi|158508476 mbt domain containing 1 [Homo sapiens]
Length = 628
Score = 33.5 bits (75), Expect = 0.26
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 107 CELCGRVDFAYKF-KRSKRFCSMACAKRYNVGCTK 140
CE+CG V F ++KRFCS++C++ Y+ K
Sbjct: 54 CEMCGMVGVRDAFYSKTKRFCSVSCSRSYSSNSKK 88
>gi|20149698 l(3)mbt-like 2 [Homo sapiens]
Length = 705
Score = 32.7 bits (73), Expect = 0.45
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 107 CELCGRVDFAYKF-KRSKRFCSMACAKRYNVGCTK 140
CE+CG V F ++KRFCS++C++ Y+ K
Sbjct: 90 CEMCGIVGTREAFFSKTKRFCSVSCSRSYSSNSKK 124
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,238,797
Number of Sequences: 37866
Number of extensions: 628495
Number of successful extensions: 1627
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1551
Number of HSP's gapped (non-prelim): 82
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.