Search of human proteins with 34878852

Search of human proteins with 34878852

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34878852 tripartite motif-containing 55 isoform 4 [Homo
sapiens]
         (241 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens]   500   e-142
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]   419   e-118
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]   419   e-118
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]   419   e-118
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]           327   4e-90
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]           307   6e-84
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]      299   1e-81
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]   110   1e-24
gi|148833499 midline 1 [Homo sapiens]                                  98   6e-21
gi|4557753 midline 1 [Homo sapiens]                                    98   6e-21
gi|15451852 midline 1 [Homo sapiens]                                   98   6e-21
gi|47174859 tripartite motif-containing 46 [Homo sapiens]              98   7e-21
gi|223890259 midline 2 isoform 2 [Homo sapiens]                        94   8e-20
gi|223890257 midline 2 isoform 1 [Homo sapiens]                        94   8e-20
gi|27436877 tripartite motif-containing 59 [Homo sapiens]              86   4e-17
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]              81   9e-16
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]              81   9e-16
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]              81   9e-16
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]              81   9e-16
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]    77   2e-14
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]    77   2e-14
gi|32454739 tripartite motif-containing 3 [Homo sapiens]               74   1e-13
gi|32454737 tripartite motif-containing 3 [Homo sapiens]               74   1e-13
gi|62865604 tripartite motif protein 31 [Homo sapiens]                 69   5e-12
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi...    66   2e-11
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]    66   2e-11
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]     66   2e-11
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]      66   3e-11
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]       66   3e-11
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]       66   3e-11

>gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens]
          Length = 241

 Score =  500 bits (1287), Expect = e-142
 Identities = 241/241 (100%), Positives = 241/241 (100%)

Query: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
           MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
Sbjct: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60

Query: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120
           YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
Sbjct: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120

Query: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180
           QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV
Sbjct: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180

Query: 181 GSNDRVQGVISQLEDTCKTIEIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLN 240
           GSNDRVQGVISQLEDTCKTIEIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLN
Sbjct: 181 GSNDRVQGVISQLEDTCKTIEIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLN 240

Query: 241 E 241
           E
Sbjct: 241 E 241


>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
          Length = 452

 Score =  419 bits (1078), Expect = e-118
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
           MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
Sbjct: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60

Query: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120
           YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
Sbjct: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120

Query: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180
           QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV
Sbjct: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180

Query: 181 GSNDRVQGVISQLEDTCKTIE 201
           GSNDRVQGVISQLEDTCKTIE
Sbjct: 181 GSNDRVQGVISQLEDTCKTIE 201



 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 40/41 (97%), Positives = 41/41 (100%)

Query: 201 EIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLNE 241
           +IGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLNE
Sbjct: 412 QIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLNE 452


>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
          Length = 548

 Score =  419 bits (1078), Expect = e-118
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
           MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
Sbjct: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60

Query: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120
           YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
Sbjct: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120

Query: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180
           QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV
Sbjct: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180

Query: 181 GSNDRVQGVISQLEDTCKTIE 201
           GSNDRVQGVISQLEDTCKTIE
Sbjct: 181 GSNDRVQGVISQLEDTCKTIE 201



 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 41/43 (95%), Positives = 42/43 (97%)

Query: 199 TIEIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLNE 241
           T +IGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLNE
Sbjct: 506 TSQIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSLNE 548


>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
          Length = 540

 Score =  419 bits (1078), Expect = e-118
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
           MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
Sbjct: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60

Query: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120
           YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
Sbjct: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD 120

Query: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180
           QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV
Sbjct: 121 QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV 180

Query: 181 GSNDRVQGVISQLEDTCKTIE 201
           GSNDRVQGVISQLEDTCKTIE
Sbjct: 181 GSNDRVQGVISQLEDTCKTIE 201


>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
          Length = 358

 Score =  327 bits (839), Expect = 4e-90
 Identities = 153/203 (75%), Positives = 177/203 (87%), Gaps = 2/203 (0%)

Query: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
           M+ ++ +K    +  +MDNLEKQLICPICLEMF+KPVVILPCQHNLCRKCA+D+FQASNP
Sbjct: 1   MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60

Query: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP--EKK 118
              +RG TT++SGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES+RP   K 
Sbjct: 61  LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120

Query: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 178
               MCEEHEEE+INIYCL+CEVPTCSLCKVFGAHKDC+VAPL  +++RQKSELSDGIA+
Sbjct: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180

Query: 179 LVGSNDRVQGVISQLEDTCKTIE 201
           LV  NDRVQ VI+Q+E+ C+TIE
Sbjct: 181 LVAGNDRVQAVITQMEEVCQTIE 203


>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
          Length = 400

 Score =  307 bits (786), Expect = 6e-84
 Identities = 153/245 (62%), Positives = 177/245 (72%), Gaps = 44/245 (17%)

Query: 1   MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
           M+ ++ +K    +  +MDNLEKQLICPICLEMF+KPVVILPCQHNLCRKCA+D+FQASNP
Sbjct: 1   MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60

Query: 61  YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP--EKK 118
              +RG TT++SGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES+RP   K 
Sbjct: 61  LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120

Query: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQK--------- 169
               MCEEHEEE+INIYCL+CEVPTCSLCKVFGAHKDC+VAPL  +++RQK         
Sbjct: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPR 180

Query: 170 ---------------------------------SELSDGIAILVGSNDRVQGVISQLEDT 196
                                            SELSDGIA+LV  NDRVQ VI+Q+E+ 
Sbjct: 181 LECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEV 240

Query: 197 CKTIE 201
           C+TIE
Sbjct: 241 CQTIE 245


>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
          Length = 353

 Score =  299 bits (766), Expect = 1e-81
 Identities = 140/194 (72%), Positives = 167/194 (86%), Gaps = 2/194 (1%)

Query: 5   LNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLP 63
           ++YKS   ++   M+NLEKQLICPICLEMFTKPVVILPCQHNLCRKCA+DIFQA+NPY  
Sbjct: 1   MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 60

Query: 64  TRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKKSDQP 122
           +RG +   SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE S+RP +K   P
Sbjct: 61  SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 120

Query: 123 MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
           MC+EHE+E+INIYCL CEVPTCS+CKVFG HK C+VAPL  VFQ QK+EL++ I++LV  
Sbjct: 121 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180

Query: 183 NDRVQGVISQLEDT 196
           NDRVQ +I+QLED+
Sbjct: 181 NDRVQTIITQLEDS 194


>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
          Length = 728

 Score =  110 bits (275), Expect = 1e-24
 Identities = 80/277 (28%), Positives = 116/277 (41%), Gaps = 83/277 (29%)

Query: 11  SKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCA---------------SDIF 55
           +K + T+ N+E++LICP C E+FT P+ ILPCQH++C KC                SD  
Sbjct: 18  AKGKVTIKNIERELICPACKELFTHPL-ILPCQHSICHKCVKELLLTLDDSFNDVGSDNS 76

Query: 56  QASNPYL--PTRGGTTMASGGR--------------FRCPSCRHEVVLDRHGVYGLQRNL 99
             S+P L  P+     +    R              F CP C H+V L   G+ GL RN 
Sbjct: 77  NQSSPRLRLPSPSMDKIDRINRPGWKRNSLTPRTTVFPCPGCEHDVDLGERGINGLFRNF 136

Query: 100 LVENIIDIYKQESTR-----------PEKKSDQP-------------------------- 122
            +E I++ Y+Q +             P ++S +                           
Sbjct: 137 TLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIHHPWGTIKAQH 196

Query: 123 --------------MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQ 168
                         MC EHE ERIN+YC  C  P C LCK+ G H + +V  ++  ++  
Sbjct: 197 EYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGNHANHRVTTMSSAYKTL 256

Query: 169 KSELSDGIAILVGSNDRVQGVISQLEDTCKTIEIGFE 205
           K +LS  I  L+G   +V+  IS+L    K  E   E
Sbjct: 257 KEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGE 293


>gi|148833499 midline 1 [Homo sapiens]
          Length = 667

 Score = 98.2 bits (243), Expect = 6e-21
 Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 79/259 (30%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE +L CPICLE+F  P+ +LPC H+LC  CA  I  +           ++ S   F
Sbjct: 1   METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVSH-----CATNESVESITAF 54

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES---------TRPEKKSDQ------ 121
           +CP+CRH + L + G+ GL+RN+ ++NIID +++ S         TR E+  D       
Sbjct: 55  QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114

Query: 122 -----PMCEEHEEERINIYCLNCEVPTC-------------------------------- 144
                  C++   +     C+ CEV  C                                
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174

Query: 145 ---------------------SLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
                                +LCK+ G H+D QVA L+  + + K  L   +  L+  N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234

Query: 184 DRVQGVISQLEDTCKTIEI 202
             ++ ++++L  TC+ +E+
Sbjct: 235 TELETLLAKLIQTCQHVEV 253


>gi|4557753 midline 1 [Homo sapiens]
          Length = 667

 Score = 98.2 bits (243), Expect = 6e-21
 Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 79/259 (30%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE +L CPICLE+F  P+ +LPC H+LC  CA  I  +           ++ S   F
Sbjct: 1   METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVSH-----CATNESVESITAF 54

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES---------TRPEKKSDQ------ 121
           +CP+CRH + L + G+ GL+RN+ ++NIID +++ S         TR E+  D       
Sbjct: 55  QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114

Query: 122 -----PMCEEHEEERINIYCLNCEVPTC-------------------------------- 144
                  C++   +     C+ CEV  C                                
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174

Query: 145 ---------------------SLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
                                +LCK+ G H+D QVA L+  + + K  L   +  L+  N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234

Query: 184 DRVQGVISQLEDTCKTIEI 202
             ++ ++++L  TC+ +E+
Sbjct: 235 TELETLLAKLIQTCQHVEV 253


>gi|15451852 midline 1 [Homo sapiens]
          Length = 667

 Score = 98.2 bits (243), Expect = 6e-21
 Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 79/259 (30%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE +L CPICLE+F  P+ +LPC H+LC  CA  I  +           ++ S   F
Sbjct: 1   METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVSH-----CATNESVESITAF 54

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES---------TRPEKKSDQ------ 121
           +CP+CRH + L + G+ GL+RN+ ++NIID +++ S         TR E+  D       
Sbjct: 55  QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114

Query: 122 -----PMCEEHEEERINIYCLNCEVPTC-------------------------------- 144
                  C++   +     C+ CEV  C                                
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174

Query: 145 ---------------------SLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
                                +LCK+ G H+D QVA L+  + + K  L   +  L+  N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234

Query: 184 DRVQGVISQLEDTCKTIEI 202
             ++ ++++L  TC+ +E+
Sbjct: 235 TELETLLAKLIQTCQHVEV 253


>gi|47174859 tripartite motif-containing 46 [Homo sapiens]
          Length = 759

 Score = 97.8 bits (242), Expect = 7e-21
 Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 99/284 (34%)

Query: 16  TMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIF------------------QA 57
           +M N+EK+L+CP+C EM+ +P+V LPC HN+C+ CA ++                    A
Sbjct: 23  SMKNMEKELLCPVCQEMYKQPLV-LPCTHNVCQACAREVLGQQGYIGHGGDPSSEPTSPA 81

Query: 58  SNPYL------------PTRGGTTMASG-----GR-----------FRCPSCRHEVVLDR 89
           S P              P R    + SG     GR           F CP+C+ +V L  
Sbjct: 82  STPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQVIMFPCPACQGDVELGE 141

Query: 90  HGVYGLQRNLLVENIIDIYKQ------------------ESTR----------------- 114
            G+ GL RNL +E +++ Y+Q                  E+T+                 
Sbjct: 142 RGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLF 201

Query: 115 ----PEKKSDQP------------MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQV 158
                +K   +P            MC +H+EE +  YC  C+   C LC+V   H   ++
Sbjct: 202 HPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEE-VTHYCKTCQRLVCQLCRVRRTHSGHKI 260

Query: 159 APLTHVFQRQKSELSDGIAILVGSNDRVQGVISQLEDTCKTIEI 202
            P+   +Q  K +L+  +  ++G+ D VQ  I +LE+  +  E+
Sbjct: 261 TPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVRHTEV 304


>gi|223890259 midline 2 isoform 2 [Homo sapiens]
          Length = 705

 Score = 94.4 bits (233), Expect = 8e-20
 Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 79/259 (30%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE +L CPICLE+F  P+ +LPC H+LC  CA  I  +S        G ++     F
Sbjct: 21  METLESELTCPICLELFEDPL-LLPCAHSLCFSCAHRILVSS-----CSSGESIEPITAF 74

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES-TRPEKKSDQ-------------- 121
           +CP+CR+ + L+  G+ GL+RN+ ++NIID +++ S + P   S+               
Sbjct: 75  QCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSS 134

Query: 122 -----PMCEEHEEERINIYCLNCEVPTC-------------------------------- 144
                  CE+         C+ CEV  C                                
Sbjct: 135 ERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGIT 194

Query: 145 ---------------------SLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
                                +LCK+ G H+D QVA L   F++ K  L   +  LV  N
Sbjct: 195 CLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRN 254

Query: 184 DRVQGVISQLEDTCKTIEI 202
             ++  +++L   C+ +E+
Sbjct: 255 SELENQMAKLIQICQQVEV 273


>gi|223890257 midline 2 isoform 1 [Homo sapiens]
          Length = 735

 Score = 94.4 bits (233), Expect = 8e-20
 Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 79/259 (30%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE +L CPICLE+F  P+ +LPC H+LC  CA  I  +S        G ++     F
Sbjct: 21  METLESELTCPICLELFEDPL-LLPCAHSLCFSCAHRILVSS-----CSSGESIEPITAF 74

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES-TRPEKKSDQ-------------- 121
           +CP+CR+ + L+  G+ GL+RN+ ++NIID +++ S + P   S+               
Sbjct: 75  QCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSS 134

Query: 122 -----PMCEEHEEERINIYCLNCEVPTC-------------------------------- 144
                  CE+         C+ CEV  C                                
Sbjct: 135 ERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGIT 194

Query: 145 ---------------------SLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
                                +LCK+ G H+D QVA L   F++ K  L   +  LV  N
Sbjct: 195 CLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRN 254

Query: 184 DRVQGVISQLEDTCKTIEI 202
             ++  +++L   C+ +E+
Sbjct: 255 SELENQMAKLIQICQQVEV 273


>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
          Length = 403

 Score = 85.5 bits (210), Expect = 4e-17
 Identities = 58/206 (28%), Positives = 82/206 (39%), Gaps = 37/206 (17%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M N E++L CPIC  +F  P V LPC H  CR C  +I QAS  +   R           
Sbjct: 1   MHNFEEELTCPICYSIFEDPRV-LPCSHTFCRNCLENILQASGNFYIWRPLRIP-----L 54

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
           +CP+CR    +   G+  L  N  +  II+ Y+QE        D   C EH  + +N+YC
Sbjct: 55  KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQED-----HPDIVTCPEHYRQPLNVYC 109

Query: 137 LNCEVPTCSLCKVFGAH--------------------------KDCQVAPLTHVFQRQKS 170
           L  +   C  C   G H                           D     LTH+ ++ K 
Sbjct: 110 LLDKKLVCGHCLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKE 169

Query: 171 ELSDGIAILVGSNDRVQGVISQLEDT 196
           + S    ++ G  + V     +L DT
Sbjct: 170 QKSHSEKMIQGDKEAVLQYFKELNDT 195


>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
          Length = 410

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 4   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 55

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 56  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 109

Query: 137 LNCEVPTCSLCKVFGAH 153
           L      C +C   G H
Sbjct: 110 LTDMQLICGICATRGEH 126


>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
          Length = 407

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 52

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 53  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 106

Query: 137 LNCEVPTCSLCKVFGAH 153
           L      C +C   G H
Sbjct: 107 LTDMQLICGICATRGEH 123


>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
          Length = 407

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 52

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 53  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 106

Query: 137 LNCEVPTCSLCKVFGAH 153
           L      C +C   G H
Sbjct: 107 LTDMQLICGICATRGEH 123


>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
          Length = 407

 Score = 80.9 bits (198), Expect = 9e-16
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 14/137 (10%)

Query: 17  MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
           M+ LE+ L CPIC  +F  P V LPC HN C+KC   I + S          ++     F
Sbjct: 1   MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 52

Query: 77  RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
           +CP+CR E      G+  LQ N  ++ I++ Y +    P+     P+C+ H  + +NI+C
Sbjct: 53  KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 106

Query: 137 LNCEVPTCSLCKVFGAH 153
           L      C +C   G H
Sbjct: 107 LTDMQLICGICATRGEH 123


>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
          Length = 744

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 29/166 (17%)

Query: 20  LEKQ-LICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRC 78
           ++KQ LIC ICLE +  P V LPC H  C +C  +       Y+P    T         C
Sbjct: 16  IDKQFLICSICLERYKNPKV-LPCLHTFCERCLQN-------YIPAHSLT-------LSC 60

Query: 79  PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD-----------QPM-CEE 126
           P CR   +L   GV  LQ N  + N++D+ ++      ++S            +P+ C  
Sbjct: 61  PVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPN 120

Query: 127 HEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSEL 172
           H+   +  YC +CE   C  C   G H +    PL  V ++ K+ L
Sbjct: 121 HDGNVMEFYCQSCETAMCREC-TEGEHAEHPTVPLKDVVEQHKASL 165


>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
          Length = 771

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 29/166 (17%)

Query: 20  LEKQ-LICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRC 78
           ++KQ LIC ICLE +  P V LPC H  C +C  +       Y+P    T         C
Sbjct: 43  IDKQFLICSICLERYKNPKV-LPCLHTFCERCLQN-------YIPAHSLT-------LSC 87

Query: 79  PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD-----------QPM-CEE 126
           P CR   +L   GV  LQ N  + N++D+ ++      ++S            +P+ C  
Sbjct: 88  PVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPN 147

Query: 127 HEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSEL 172
           H+   +  YC +CE   C  C   G H +    PL  V ++ K+ L
Sbjct: 148 HDGNVMEFYCQSCETAMCREC-TEGEHAEHPTVPLKDVVEQHKASL 192


>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 28/189 (14%)

Query: 13  EQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMAS 72
           E Q MD  ++ L+C ICL+ +  P V LPC H  C +C  +       Y+P +  T    
Sbjct: 11  EVQPMD--KQFLVCSICLDRYQCPKV-LPCLHTFCERCLQN-------YIPAQSLT---- 56

Query: 73  GGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD---------QPM 123
                CP CR   +L   GV  LQ N  + ++++  +Q         D         +P+
Sbjct: 57  ---LSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113

Query: 124 -CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
            C  HE + +  YC  CE   C  C+  G H++     L  V ++ K+ L   +  + G 
Sbjct: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172

Query: 183 NDRVQGVIS 191
             ++   I+
Sbjct: 173 LPQLSAAIA 181


>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 28/189 (14%)

Query: 13  EQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMAS 72
           E Q MD  ++ L+C ICL+ +  P V LPC H  C +C  +       Y+P +  T    
Sbjct: 11  EVQPMD--KQFLVCSICLDRYQCPKV-LPCLHTFCERCLQN-------YIPAQSLT---- 56

Query: 73  GGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD---------QPM 123
                CP CR   +L   GV  LQ N  + ++++  +Q         D         +P+
Sbjct: 57  ---LSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113

Query: 124 -CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
            C  HE + +  YC  CE   C  C+  G H++     L  V ++ K+ L   +  + G 
Sbjct: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172

Query: 183 NDRVQGVIS 191
             ++   I+
Sbjct: 173 LPQLSAAIA 181


>gi|62865604 tripartite motif protein 31 [Homo sapiens]
          Length = 425

 Score = 68.6 bits (166), Expect = 5e-12
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 22/166 (13%)

Query: 15  QTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGG 74
           Q ++ L++++ICPICL++  KPV I  C HN C KC + I +               S G
Sbjct: 5   QFVNKLQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGE--------------TSCG 49

Query: 75  RFRCPSCRHEVVLDRHGVYGLQRNLLVENIID-IYKQESTRPEKKSDQPMCEEHEEERIN 133
            F+CP C+  V  +      ++ N L+ N+++ I   +++  + K  +  C  H +E  +
Sbjct: 50  FFKCPLCKTSVRKN-----AIRFNSLLRNLVEKIQALQASEVQSKRKEATCPRH-QEMFH 103

Query: 134 IYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAIL 179
            +C +     C +C+    HK   V+ +    Q  + ++ + I +L
Sbjct: 104 YFCEDDGKFLCFVCRESKDHKSHNVSLIEEAAQNYQGQIQEQIQVL 149


>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
           sapiens]
          Length = 343

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 16/160 (10%)

Query: 20  LEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCP 79
           L+++  C ICL+ FT PV+   C HN CR C    ++ +      R        G F CP
Sbjct: 10  LQEEATCSICLDYFTDPVMTT-CGHNFCRACIQLSWEKARGKKGRR-----KRKGSFPCP 63

Query: 80  SCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLNC 139
            CR             QRNLL   ++    + + +      Q +C+EH E  + ++C   
Sbjct: 64  ECRE---------MSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEP-LKLFCQKD 113

Query: 140 EVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAIL 179
           + P C +C+    H+  +V P     Q  K +L + +  L
Sbjct: 114 QSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYL 153


>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
          Length = 477

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 16/160 (10%)

Query: 20  LEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCP 79
           L+++  C ICL+ FT PV+   C HN CR C    ++ +      R        G F CP
Sbjct: 10  LQEEATCSICLDYFTDPVMTT-CGHNFCRACIQLSWEKARGKKGRR-----KRKGSFPCP 63

Query: 80  SCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLNC 139
            CR             QRNLL   ++    + + +      Q +C+EH E  + ++C   
Sbjct: 64  ECRE---------MSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEP-LKLFCQKD 113

Query: 140 EVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAIL 179
           + P C +C+    H+  +V P     Q  K +L + +  L
Sbjct: 114 QSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYL 153


>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
          Length = 477

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 16/160 (10%)

Query: 20  LEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCP 79
           L+++  C ICL+ FT PV+   C HN CR C    ++ +      R        G F CP
Sbjct: 10  LQEEATCSICLDYFTDPVMTT-CGHNFCRACIQLSWEKARGKKGRR-----KRKGSFPCP 63

Query: 80  SCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLNC 139
            CR             QRNLL   ++    + + +      Q +C+EH E  + ++C   
Sbjct: 64  ECRE---------MSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEP-LKLFCQKD 113

Query: 140 EVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAIL 179
           + P C +C+    H+  +V P     Q  K +L + +  L
Sbjct: 114 QSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYL 153


>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
          Length = 270

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)

Query: 19  NLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRC 78
           N+++++ CPICLE+ T+P + L C H+LCR C +     SN    T      + GG+  C
Sbjct: 8   NVQEEVTCPICLELLTEP-LSLDCGHSLCRACIT----VSNKEAVT------SMGGKSSC 56

Query: 79  PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLN 138
           P C      +      LQ N  + NI++  K+    P+    + +C +H  E++ ++C  
Sbjct: 57  PVCGISYSFEH-----LQANQHLANIVERLKEVKLSPDNGKKRDLC-DHHGEKLLLFCKE 110

Query: 139 CEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSEL 172
                C LC+    H+         VF+  + +L
Sbjct: 111 DRKVICWLCERSQEHRGHHTVLTEEVFKECQEKL 144


>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)

Query: 19  NLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRC 78
           N+++++ CPICLE+ T+P + L C H+LCR C +     SN    T      + GG+  C
Sbjct: 8   NVQEEVTCPICLELLTEP-LSLDCGHSLCRACIT----VSNKEAVT------SMGGKSSC 56

Query: 79  PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLN 138
           P C      +      LQ N  + NI++  K+    P+    + +C +H  E++ ++C  
Sbjct: 57  PVCGISYSFEH-----LQANQHLANIVERLKEVKLSPDNGKKRDLC-DHHGEKLLLFCKE 110

Query: 139 CEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSEL 172
                C LC+    H+         VF+  + +L
Sbjct: 111 DRKVICWLCERSQEHRGHHTVLTEEVFKECQEKL 144


>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)

Query: 19  NLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRFRC 78
           N+++++ CPICLE+ T+P + L C H+LCR C +     SN    T      + GG+  C
Sbjct: 8   NVQEEVTCPICLELLTEP-LSLDCGHSLCRACIT----VSNKEAVT------SMGGKSSC 56

Query: 79  PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLN 138
           P C      +      LQ N  + NI++  K+    P+    + +C +H  E++ ++C  
Sbjct: 57  PVCGISYSFEH-----LQANQHLANIVERLKEVKLSPDNGKKRDLC-DHHGEKLLLFCKE 110

Query: 139 CEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSEL 172
                C LC+    H+         VF+  + +L
Sbjct: 111 DRKVICWLCERSQEHRGHHTVLTEEVFKECQEKL 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,052,421
Number of Sequences: 37866
Number of extensions: 464458
Number of successful extensions: 2092
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 1712
Number of HSP's gapped (non-prelim): 333
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.