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Search of human proteins with 34740327
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34740327 zinc finger protein 804A [Homo sapiens]
(1209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34740327 zinc finger protein 804A [Homo sapiens] 2461 0.0
gi|31791053 zinc finger protein 804B [Homo sapiens] 296 8e-80
gi|50962882 G patch domain containing 8 [Homo sapiens] 266 9e-71
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 48 6e-05
gi|150010604 kinesin family member 4B [Homo sapiens] 42 0.004
gi|197313748 SET domain containing 2 [Homo sapiens] 41 0.006
gi|55770834 centromere protein F [Homo sapiens] 41 0.008
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 40 0.010
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 40 0.010
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 40 0.010
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 40 0.010
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 40 0.010
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 40 0.010
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 40 0.010
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 40 0.010
gi|139394648 DNA polymerase theta [Homo sapiens] 40 0.018
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 40 0.018
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 40 0.018
gi|210031233 PR domain containing 6 [Homo sapiens] 39 0.023
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.023
gi|193788649 retinoic acid induced 2 [Homo sapiens] 39 0.023
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s... 39 0.023
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s... 39 0.023
gi|61966923 forkhead box B2 [Homo sapiens] 39 0.030
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.051
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 38 0.051
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 38 0.067
gi|7705415 hook homolog 1 [Homo sapiens] 38 0.067
gi|47132519 Ras association and pleckstrin homology domains 1 is... 38 0.067
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 37 0.087
>gi|34740327 zinc finger protein 804A [Homo sapiens]
Length = 1209
Score = 2461 bits (6379), Expect = 0.0
Identities = 1209/1209 (100%), Positives = 1209/1209 (100%)
Query: 1 MECYYIVISSTHLSNGHFRNIKGVFRGPLSKNGNKTLDYAEKENTIAKALEDLKANFYCE 60
MECYYIVISSTHLSNGHFRNIKGVFRGPLSKNGNKTLDYAEKENTIAKALEDLKANFYCE
Sbjct: 1 MECYYIVISSTHLSNGHFRNIKGVFRGPLSKNGNKTLDYAEKENTIAKALEDLKANFYCE 60
Query: 61 LCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKL 120
LCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKL
Sbjct: 61 LCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKL 120
Query: 121 AELRKETVCAPGSGPMFKSTTVTVRENCNEISQRVVVDSVNNQQDFKYTLIHSEENTKDA 180
AELRKETVCAPGSGPMFKSTTVTVRENCNEISQRVVVDSVNNQQDFKYTLIHSEENTKDA
Sbjct: 121 AELRKETVCAPGSGPMFKSTTVTVRENCNEISQRVVVDSVNNQQDFKYTLIHSEENTKDA 180
Query: 181 TTVAEDPESANNYTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDA 240
TTVAEDPESANNYTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDA
Sbjct: 181 TTVAEDPESANNYTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDA 240
Query: 241 SVGKGFSRKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVS 300
SVGKGFSRKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVS
Sbjct: 241 SVGKGFSRKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVS 300
Query: 301 SEKDALLLPSFCKFQLQLSSDADNCQNSVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
SEKDALLLPSFCKFQLQLSSDADNCQNSVPLADQIPLESVVINEDIPVSGNSFELLGNKS
Sbjct: 301 SEKDALLLPSFCKFQLQLSSDADNCQNSVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEVENKNGPETLAPSNTEEVNITIHKKTNFCKR 420
TVLDMSNDCISVQATTEENVKHNEASTTEVENKNGPETLAPSNTEEVNITIHKKTNFCKR
Sbjct: 361 TVLDMSNDCISVQATTEENVKHNEASTTEVENKNGPETLAPSNTEEVNITIHKKTNFCKR 420
Query: 421 QCEPFVPVLNKHRSTVLQWPSEMLVYTTTKPSISYSCNPLCFDFKSTKVNNNLDKNKPDL 480
QCEPFVPVLNKHRSTVLQWPSEMLVYTTTKPSISYSCNPLCFDFKSTKVNNNLDKNKPDL
Sbjct: 421 QCEPFVPVLNKHRSTVLQWPSEMLVYTTTKPSISYSCNPLCFDFKSTKVNNNLDKNKPDL 480
Query: 481 KDLCSQQKQEDICMGPLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDILSSSCDSGK 540
KDLCSQQKQEDICMGPLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDILSSSCDSGK
Sbjct: 481 KDLCSQQKQEDICMGPLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDILSSSCDSGK 540
Query: 541 NENTGQRYKNISCKIRETEKYNFTKSQIKQDTLDEKYNKIRLKETHEYWFHKSRRKKKRK 600
NENTGQRYKNISCKIRETEKYNFTKSQIKQDTLDEKYNKIRLKETHEYWFHKSRRKKKRK
Sbjct: 541 NENTGQRYKNISCKIRETEKYNFTKSQIKQDTLDEKYNKIRLKETHEYWFHKSRRKKKRK 600
Query: 601 KLCQHHHMEKTKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRP 660
KLCQHHHMEKTKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRP
Sbjct: 601 KLCQHHHMEKTKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRP 660
Query: 661 KSESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGKHNLTYSR 720
KSESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGKHNLTYSR
Sbjct: 661 KSESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGKHNLTYSR 720
Query: 721 TYCCWKTKMSSCSQDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYS 780
TYCCWKTKMSSCSQDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYS
Sbjct: 721 TYCCWKTKMSSCSQDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYS 780
Query: 781 SDESLNRQNHLPEEFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENTDYPVKDNS 840
SDESLNRQNHLPEEFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENTDYPVKDNS
Sbjct: 781 SDESLNRQNHLPEEFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENTDYPVKDNS 840
Query: 841 SLNPLDRLISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEM 900
SLNPLDRLISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEM
Sbjct: 841 SLNPLDRLISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEM 900
Query: 901 ETTSGELSDVSNDPTTSVCVASAPTKEAIDNTLLEHKERSENINLNEKQIPFQVPNIERN 960
ETTSGELSDVSNDPTTSVCVASAPTKEAIDNTLLEHKERSENINLNEKQIPFQVPNIERN
Sbjct: 901 ETTSGELSDVSNDPTTSVCVASAPTKEAIDNTLLEHKERSENINLNEKQIPFQVPNIERN 960
Query: 961 FRQSQPKSYLCHYELAEALPQGKMNETPTEWLRYNSGILNTQPPLPFKEAHVSGHTFVTA 1020
FRQSQPKSYLCHYELAEALPQGKMNETPTEWLRYNSGILNTQPPLPFKEAHVSGHTFVTA
Sbjct: 961 FRQSQPKSYLCHYELAEALPQGKMNETPTEWLRYNSGILNTQPPLPFKEAHVSGHTFVTA 1020
Query: 1021 EQILAPLALPEQALLIPLENHDKFKNVPCEVYQHILQPNMLANKVKFTFPPAALPPPSTP 1080
EQILAPLALPEQALLIPLENHDKFKNVPCEVYQHILQPNMLANKVKFTFPPAALPPPSTP
Sbjct: 1021 EQILAPLALPEQALLIPLENHDKFKNVPCEVYQHILQPNMLANKVKFTFPPAALPPPSTP 1080
Query: 1081 LQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTR 1140
LQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTR
Sbjct: 1081 LQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTR 1140
Query: 1141 TSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHALFPSLLSPHP 1200
TSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHALFPSLLSPHP
Sbjct: 1141 TSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHALFPSLLSPHP 1200
Query: 1201 TVIPLQPLF 1209
TVIPLQPLF
Sbjct: 1201 TVIPLQPLF 1209
>gi|31791053 zinc finger protein 804B [Homo sapiens]
Length = 1349
Score = 296 bits (758), Expect = 8e-80
Identities = 207/554 (37%), Positives = 307/554 (55%), Gaps = 54/554 (9%)
Query: 1 MECYYIVISSTHLSNGHFRNIKGVFRGPLSKNGNKTLDYAEKENTIAKALEDLKANFYCE 60
M CY +VISS HLSNGH+R IKGVFRGPL KNG+ + D+AEK++T AKALED+KANFYCE
Sbjct: 1 MACY-LVISSRHLSNGHYRGIKGVFRGPLCKNGSPSPDFAEKKST-AKALEDVKANFYCE 58
Query: 61 LCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKL 120
LCDKQY+KHQEFDNHINSYDHAHKQRLKELKQREFARNVASKS KDE+KQEKAL+RLH+L
Sbjct: 59 LCDKQYHKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSWKDEKKQEKALKRLHQL 118
Query: 121 AELRKETVCAPGSGPMFKSTTVTVRENCNEISQRVV-VDSVNNQQDFKYTLIHSEENTKD 179
AELR+++ C G+GP +K+ V + + ++ Q + + + K L+ +N
Sbjct: 119 AELRQQSECVSGNGPAYKAPRVAIEK---QLQQGIFPIKNGRKVSCMKSALLLKGKNLPR 175
Query: 180 ATTVAEDPESANNYTAKN-------NQVGDQAQGIHR--HKIGFSFAFPKKASVKLESSA 230
+ + N + ++ NQV + + H+ G SF F KK +KLESSA
Sbjct: 176 IISDKQRSTMPNRHQLQSDRRCLFGNQVLQTSSDLSNANHRTGVSFTFSKKVHLKLESSA 235
Query: 231 AAFSEYSDDA-SVGKGFSRKSRFVPSACHLQQSSPTDVLLSSEEKTN-SFHPPEAMCRDK 288
+ FSE +++ K K++ C + + D L+ E++ N S E++ +
Sbjct: 236 SVFSENTEETHDCNKSPIYKTKQTADKCKCCRFANKDTHLTKEKEVNISPSHLESVLHNT 295
Query: 289 ETVQTQEIKEVSSEKDALLLPS------FCKFQLQLSSDADNCQNSVPLADQIPLESVVI 342
++ ++ +++ D L S F K + LS D D S + L++ +
Sbjct: 296 ISINSKILQDKHDSIDETLEDSIGIHASFSKSNIHLS-DVDFTPTSREKETRNTLKNTLE 354
Query: 343 N-EDIPVSGNSFELLGN-----KSTVLDMSNDCISVQATTEENVKHNEASTTEVENKNGP 396
N + P N+ N + + + ++ S++ + +++ H ++ +EN+
Sbjct: 355 NCVNHPCQANASFSPPNIYNHSDARISECLDEFSSLEPSEQKSTVHLNPNS-RIENREK- 412
Query: 397 ETLAPSNTEEVNITIHKKTNFCKRQCE--------PFVPVLNKHRSTVLQWPSEMLVYTT 448
+ TE V+ + + K C PF+ V +K T LQWP+E+L++T
Sbjct: 413 ---SLDKTERVSKNVQR---LVKEACTHNVASKPLPFLHVQSKDGHTTLQWPTELLLFTK 466
Query: 449 TKPSISYSCNPLCFDFK---STKVNNNLDKNKPDL--KDLCSQQKQEDICMGPLSDYKDV 503
T+P ISY CNPL FDFK +TK ++NL+ K +L K L + K+E G D + +
Sbjct: 467 TEPCISYGCNPLYFDFKLSRNTKEDHNLEDLKTELGKKPLELKTKRESQVSGLTEDQQKL 526
Query: 504 STEGLTDYEIGSSK 517
E DY+ K
Sbjct: 527 IQE---DYQYPKPK 537
Score = 70.1 bits (170), Expect = 1e-11
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 31/191 (16%)
Query: 1029 LPEQALLIPLENHDKFKNVPCEVYQHILQPNMLANKVKFTFPPAALPP---PSTPLQPLP 1085
L +Q + + DK+K + + QH +Q +L+ ++ PAA P P++ +Q +P
Sbjct: 1143 LIQQPITFSPDEIDKYKILQLQAQQH-MQKQLLSKHLRVL--PAAGPTAFSPASTVQTVP 1199
Query: 1086 LQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFL--SQIPALTRTSL 1143
+ Q TS+TTIHHT LQ A +A+ L H L + + L++
Sbjct: 1200 VHQH---TSITTIHHTFLQHFAVSAS-------------LSSHSSHLPIAHLHPLSQAHF 1243
Query: 1144 PQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHALF-PSLLSPH--- 1199
+S + P + P + PTF+A + ++ A+ HPSH+ LP F P+L PH
Sbjct: 1244 SPISFSTLTPTIIPAH-PTFLAGHPLHLVAATPFHPSHITLQPLPPTAFIPTLFGPHLNP 1302
Query: 1200 --PTVIPLQPL 1208
++I L PL
Sbjct: 1303 ATTSIIHLNPL 1313
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 266 bits (680), Expect = 9e-71
Identities = 214/629 (34%), Positives = 308/629 (48%), Gaps = 86/629 (13%)
Query: 35 KTLDYAEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELKQRE 94
K DY +KE IAKALEDL+ANFYCELCDKQY KHQEFDNHINSYDHAHKQRLK+LKQRE
Sbjct: 114 KYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKHQEFDNHINSYDHAHKQRLKDLKQRE 173
Query: 95 FARNVASKSRKDERKQEKALQRLHKLAELRKETVCAPGSGPMFKSTTVTVRENCNEISQR 154
FARNV+S+SRKDE+KQEKAL+RLH+LAE RK+ CAPGSGPMFK TTV V E E +
Sbjct: 174 FARNVSSRSRKDEKKQEKALRRLHELAEQRKQAECAPGSGPMFKPTTVAVDEEGGEDDKD 233
Query: 155 VVVDSVNNQQDFKYTL--IHSEENT-----------KDATTVAEDPESAN---NYTAKNN 198
+S N + SE +T + T +A+ P A+ ++ KNN
Sbjct: 234 ---ESATNSGTGATASCGLGSEFSTDKGGPFTAVQITNTTGLAQAPGLASQGISFGIKNN 290
Query: 199 QVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFSRKSRFVPSACH 258
G K+G SF+F KKA VKLES A+ F +++++ + G + S
Sbjct: 291 ------LGTPLQKLGVSFSFAKKAPVKLESIASVFKDHAEEGTSEDGTKPDEK--SSDQG 342
Query: 259 LQQSSPTDVLLSSEEKTNSFHPPE------AMCRDKETVQTQEIKEVSSEKDALLLPSFC 312
LQ+ +D + + K P + + + K + + E + P+ C
Sbjct: 343 LQKVGDSDGSSNLDGKKEDEDPQDGGSLASTLSKLKRMKREEGAGATEPEYYHYIPPAHC 402
Query: 313 K----------FQLQLSSDADNCQNSVPLADQIPLESVVINEDIPVSGNSFELLGNKSTV 362
K + D DN + + S I + + G + TV
Sbjct: 403 KVKPNFPFLLFMRASEQMDGDNTTHPKNAPESKKGSSPKPKSCIKAAASQ----GAEKTV 458
Query: 363 LDMSNDCISVQATTEENVKHNEASTTEVENKNGPETLAPSNTEEVNIT------IHKKTN 416
++S + TE + ++A + + + S++++V+ T K+T+
Sbjct: 459 SEVSEQ-PKETSMTEPSEPGSKAEAKKALGGDVSDQSLESHSQKVSETQMCESNSSKETS 517
Query: 417 FC-----------KRQCEPFVPVLNKHRSTVLQWPSEMLVYTTTKPSISYSCNPLCFDFK 465
K PF PVL+K ST LQWPSE+L++T +PSISYSCNPL FDFK
Sbjct: 518 LATPAGKESQEGPKHPTGPFFPVLSKDESTALQWPSELLIFTKAEPSISYSCNPLYFDFK 577
Query: 466 STKVNNNLDKNKPDLKDLCSQQKQ--EDICMGPLSDYKDVSTEGLTDYEIG-----SSKN 518
++ + K KD+ S K + + G + K+V E + G +S +
Sbjct: 578 LSRNKDARTKGTEKPKDIGSSSKDHLQGLDPGEPNKSKEVGGEKIVRSSGGRMDAPASGS 637
Query: 519 KCSQVTPLLADDILSSSCDS------GKNENTGQRYKNISCKIRETEKYNFTKSQIKQDT 572
CS + S + K E +G+ +++ K ++ +K + K + K DT
Sbjct: 638 ACSGLNKQEPGGSHGSETEDTGRSLPSKKERSGKSHRH--KKKKKHKKSSKHKRKHKADT 695
Query: 573 LDEKYNKIRLKETHEYWFHKSRRKKKRKK 601
+EK +K E K R+K+KRKK
Sbjct: 696 -EEKSSKAESGEK-----SKKRKKRKRKK 718
Score = 107 bits (266), Expect = 9e-23
Identities = 74/194 (38%), Positives = 106/194 (54%), Gaps = 20/194 (10%)
Query: 1024 LAPLALPEQALLIPLENHDKFKNVPCEVYQHILQPNMLANKVKFTFPPAALPPPSTP-LQ 1082
LAPL Q + E +K+ + QHI Q +LA +VK FP +A P+TP LQ
Sbjct: 1302 LAPLE--SQPITFTPEEMEKYSKLQQAAQQHI-QQQLLAKQVK-AFPASAALAPATPALQ 1357
Query: 1083 PLPLQQ--SLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTR 1140
P+ +QQ + +TS+TT+ H +LQ HAAAAAAA PH Q L+Q+ + +
Sbjct: 1358 PIHIQQPATASATSITTVQHAILQHHAAAAAAAIGIHP-------HPHPQPLAQVHHIPQ 1410
Query: 1141 TSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPH-ALFPSLLSPH 1199
L +S+ + + PG+ TF+A + IIPAS +HP F +PH AL+P+LL+P
Sbjct: 1411 PHLTPISLSHLTHSIIPGHPATFLASHPIHIIPASAIHPGPFTFHPVPHAALYPTLLAPR 1470
Query: 1200 P-----TVIPLQPL 1208
P T + L PL
Sbjct: 1471 PAAAAATALHLHPL 1484
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 47.8 bits (112), Expect = 6e-05
Identities = 51/181 (28%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 1048 PCEVYQHILQPNMLANKVKFTFPPAALPPPSTPL------------------QPLPLQQS 1089
P + QH P M +F P LPPPSTP+ QP PL Q
Sbjct: 692 PPSLQQHFPDPAM-------SFAPV-LPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQV 743
Query: 1090 LCSTSVTTIHHTV--LQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTRTSLPQLS 1147
L V + L + A A+ A A ++ Q Q L+Q+P PQ+
Sbjct: 744 LAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVP-------PQMP 796
Query: 1148 VGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHALFPSLLSPHPTVIPLQP 1207
PV P + P PP +P +P + + P P + PSL +P P P P
Sbjct: 797 PIPVVPPITP-LAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALP 855
Query: 1208 L 1208
L
Sbjct: 856 L 856
Score = 33.5 bits (75), Expect = 1.3
Identities = 77/383 (20%), Positives = 128/383 (33%), Gaps = 76/383 (19%)
Query: 889 SETNGETEHLEMETTSGELSDVSNDPTTSVCVASAPTKEA--IDNTL-----LEHKERSE 941
S +++ + G L+D + P+ + CV S P E + +L + +
Sbjct: 622 STVYSDSQSSQQSVMLGSLADAA--PSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAP 679
Query: 942 NINLNEKQIPFQVPNIERNFRQSQ--------PKSYLCHYELAEALPQGKM-----NETP 988
+ + P P+++++F P S + P G+ TP
Sbjct: 680 GLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTP 739
Query: 989 TEWLRYNSGILNTQPPLPFKEAHVSGHTFVTAEQILAPLALPEQAL-------------- 1034
+ ++ QP P +++ + V A L PL +P+ L
Sbjct: 740 LPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIP 799
Query: 1035 ----LIPLENHD----KFKNVPCEVYQHILQPNMLANKVKFTFPPAALPP--PSTPLQPL 1084
+ PL D ++P + P + V A LPP P+ PLQ +
Sbjct: 800 VVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAV 859
Query: 1085 PLQQSL-------CSTSVTTIHHTV------------LQQHAAAAAAAAAAAAAGTFKVL 1125
L C T V T+ L H+A A F +
Sbjct: 860 KLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQM 919
Query: 1126 QPHQQFLSQIPALTRTSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFP 1185
P + +P ++ + P P L P QPT PPQ P++P P P
Sbjct: 920 AP-----TDVPPSPHHTVQNMRATPPQPALPP--QPTL--PPQ-PVLPPQPTLPPQPVLP 969
Query: 1186 SLPHALFPSLLSPHPTVIPLQPL 1208
P +L P P ++P QP+
Sbjct: 970 PQPTRPPQPVLPPQP-MLPPQPV 991
Score = 31.2 bits (69), Expect = 6.2
Identities = 45/140 (32%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 1070 PPAALPP-PSTPLQPLPLQQSL--CSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQ 1126
P LPP P+ P++P PLQ L + T +L H A A AA V
Sbjct: 988 PQPVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVP---TVPV 1044
Query: 1127 PHQQFLSQIPALTRTSLPQLSVGPVGPRLC---PGNQPTFVAPPQ-MPIIPASVLHPSHL 1182
P LS P L L P P L P + T A Q +P A++L P++
Sbjct: 1045 PPAAVLS--PPLPEVLL------PAAPELLPQFPSSLATVSASVQSVPTQTATLLPPAN- 1095
Query: 1183 AFPSLPHALFPSLLSPHPTV 1202
P LP P + SP PTV
Sbjct: 1096 --PPLPGG--PGIASPCPTV 1111
Score = 30.8 bits (68), Expect = 8.1
Identities = 46/173 (26%), Positives = 63/173 (36%), Gaps = 24/173 (13%)
Query: 1050 EVYQHILQPNMLANKVKFTFPPAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAA 1109
E QH+L P T P +A S ++ S S ++ +L A A
Sbjct: 593 EADQHLLPP---------TLPTSATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADA 643
Query: 1110 AAAAAAAAAAGTFKVLQPHQQFLSQIPALTR-TSLPQLSVGPVGPRLCPGN-QPTF---- 1163
A + A + Q L + A + T+ P L VG V CP + Q F
Sbjct: 644 APSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPA 703
Query: 1164 -----VAPP---QMPIIPASVLHPSHLAFPSLPHALFPSLLSPHPTVIPLQPL 1208
V PP MP P P P P +L+P P V+PLQP+
Sbjct: 704 MSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQP-VVPLQPV 755
>gi|150010604 kinesin family member 4B [Homo sapiens]
Length = 1234
Score = 42.0 bits (97), Expect = 0.004
Identities = 135/681 (19%), Positives = 247/681 (36%), Gaps = 101/681 (14%)
Query: 256 ACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALLLPSFCKFQ 315
AC L + L E K N E +C ++ + ++ + + A + + + +
Sbjct: 442 ACKLDLQKLVETLEDQELKENV----EIICNLQQLIT--QLSDETVACTAAAIDTAVEEE 495
Query: 316 LQLSSDADNCQNSVPLADQIPLESVVINEDIPVSGNSF---ELLGNKSTVLDMSNDCISV 372
Q+ + + ++S Q L +++++ N+ E L K T D N +
Sbjct: 496 AQVETSPETSRSSDAFTTQHALHQAQMSKEVVELNNALALKEALVRKMTQND--NQLQPI 553
Query: 373 QATTEENVKHNEASTTEVENKNGPETLAPSNTEEVNITIHKKTNFCKRQCEPFVPVLNKH 432
Q ++N+K+ E ++ K E + T + N+ K L++H
Sbjct: 554 QFQYQDNIKNLELEVINLQ-KEKEELVRELQTAKKNVNQAK---------------LSEH 597
Query: 433 RSTVLQWPSEMLVYTTTKPSISYSCNPLCFDFKST--KVNNNLDKNKPDLKDLCSQQKQE 490
R +LQ + K + L + T K+N + K L Q K++
Sbjct: 598 RHKLLQELEGQIADLKKKLNEQSKLLKLKESTERTVSKLNQEIWMMKNQRVQLMRQMKED 657
Query: 491 DICMGPLSDYKDVSTEGLTD------YEIGSSKNKCSQVTPLLADDILSSSCDSGKNENT 544
KD L + YE+ + + + +L ++ + + ++
Sbjct: 658 AEKFRQWKQKKDKEVIQLKERDRKRQYELLKLERNFQKQSSVLRRKTEEAAAANKRLKDA 717
Query: 545 GQRYKNISCKIRETEKYNFTKSQIKQDTLDEKYNKIRLK-ETHEYWFHKSRRKKKRKKLC 603
Q+ + ++ K +ET+ + K I + N+I + T E H + + RK L
Sbjct: 718 LQKQREVTDKRKETQSHG--KEGIAARVRNWLGNEIEVMVSTEEAKRHLNDLLEDRKILA 775
Query: 604 QHH-HMEKTKESETRCKMEAEN---SYTENAGKYL-LEPISEKQY--LAAEQLLDSHQLL 656
Q +++ KES + S +E G+ L E KQ L E L S Q+
Sbjct: 776 QDVVQLKEKKESRENPPPKLRKCTFSLSEVHGQVLESEDCITKQIESLETEMELRSAQIA 835
Query: 657 DKRPKSESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGK--H 714
D + K D + C ++ I++ K L G+ ++ IH K +
Sbjct: 836 DLQQKLLDAESEDRPKQC---------WENIATILEAKCALKYLIGELVSSKIHVTKLEN 886
Query: 715 NLTYSRTYCCWKTKMSSCSQDHRSLV---LQNDMKHMSQNQAVKRGYNSVMNESERFYRK 771
+L S+ C KM Q+H S + LQ ++ M Q K Y + + K
Sbjct: 887 SLRQSKASCADMQKMLFEEQNHFSEIETELQAELVRMEQQHQEKVLYLVSQLQESQMAEK 946
Query: 772 RRQHSHSYSS----------DESL------------------------------NRQNHL 791
+ + S S DE L +RQ HL
Sbjct: 947 QLEKSASEKEQQLVSTLQCQDEELEKMREVCEQNQQLLQENEIIKQKLILLQVASRQKHL 1006
Query: 792 PEEFLRPPSTSVAPCKPKKKRRRKRGRF-HPGFETLELKENTDYPVKDNSSLNPLDRLIS 850
P + L P +S PK K R + +F + +LK +++ V ++ D
Sbjct: 1007 PNDTLLSPDSSFEYIPPKPKPSRVKEKFLEQSMDIEDLKYCSEHSVNEHED-GDGDGDSD 1065
Query: 851 EDKKEKMKPQEVAKIERNSEQ 871
E E+ KP ++ K+ R + Q
Sbjct: 1066 EGDDEEWKPTKLVKVSRKNIQ 1086
>gi|197313748 SET domain containing 2 [Homo sapiens]
Length = 2564
Score = 41.2 bits (95), Expect = 0.006
Identities = 96/504 (19%), Positives = 183/504 (36%), Gaps = 90/504 (17%)
Query: 440 PSEMLVYTTTKPSISYSCNPLCFDFKSTKVNNNLDKNKPDL----KDLCSQQKQEDICMG 495
P ++ V + +P I L D K ++N+L+++ + D+ S K+ED +G
Sbjct: 230 PVDVAVRSLKEPPIIIVPESLEADTKQDTISNSLEEHVTQILNEQADISS--KKEDSHIG 287
Query: 496 PLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDILSSSCDSGKNENTGQRYKNISCKI 555
+ D S L+ + GS K K SQ + S S + ++ QR ++
Sbjct: 288 KDEEIPDSSKISLSCKKTGSKK-KSSQSEGIFLG---SESDEDSVRTSSSQRSHDLKFSA 343
Query: 556 RETEKYNFTKSQI-------------KQDTLDEKYNKIRLKETHEYWFHKSRRKKKRKKL 602
++ +F KS K D D+ ++ +L+ Y + R +++R++
Sbjct: 344 SIEKERDFKKSSAPLKSEDLGKPSRSKTDRDDKYFSYSKLERDTRYVSSRCRSERERRRS 403
Query: 603 CQHHHMEKTKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRPKS 662
H E+ + + Y ++ +Y + E+ S D R +
Sbjct: 404 RSHSRSERGSRTNLSYSRSERSHYYDSDRRY------HRSSPYRERTRYSRPYTDNRARE 457
Query: 663 ESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGKHN----LTY 718
S S EE KT+ S T HS + +Y
Sbjct: 458 SSDS---EEEYKKTY--------------------------SRRTSSHSSSYRDLRTSSY 488
Query: 719 SRTYCCWKTKMSSCSQDHR---SLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQH 775
S++ KT+ S + R S L+ + K S+N+A+KR +E +R+ +
Sbjct: 489 SKSDRDCKTETSYLEMERRGKYSSKLERESKRTSENEAIKR---CCSPPNELGFRRGSSY 545
Query: 776 SHSYSSDESLNRQNHLPEEFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENTDYP 835
S D S +R KP K + + F E+K++ +
Sbjct: 546 S---KHDSSASRYKS-------------TLSKPIPKSDKFKNSFCCTELNEEIKQSHSFS 589
Query: 836 VKDNSSLNPLDRLISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGET 895
++ S R+I+++ + + N T + ++L + + +++
Sbjct: 590 LQTPCSKGSELRMINKNPEREKAGSPAPSNRLNDSPTLKKLDELPIFKSEFITHDSHDSI 649
Query: 896 EHLEMETTSGELSDVSNDPTTSVC 919
+ L+ LS V ND S C
Sbjct: 650 KELD------SLSKVKNDQLRSFC 667
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 40.8 bits (94), Expect = 0.008
Identities = 98/456 (21%), Positives = 167/456 (36%), Gaps = 67/456 (14%)
Query: 554 KIRETEKYNFTKSQIKQDTLDEKYNKIRLKETHEYWFHKSRRKKKRKKLCQHHHMEKTKE 613
+I E + N T +I EK N I+ E+ + + R+K +L + EK
Sbjct: 968 EIEELTQENGTLKEINASLNQEKMNLIQKSESFANYIDE--REKSISELSDQYKQEKLIL 1025
Query: 614 SETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRPKSESISLSDNEEM 673
+ RC+ E N+Y E +S+K Y AA++ K K E + L++ +
Sbjct: 1026 LQ-RCE-ETGNAY---------EDLSQK-YKAAQE---------KNSKLECL-LNECTSL 1063
Query: 674 CKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGKHNLTYSRTYCCWKTKMSSCS 733
C+ E +K H + T L + NL ++ +
Sbjct: 1064 CENRKNELEQLKEAFAKEHQEFLTKLAFAEER-------NQNLML---------ELETVQ 1107
Query: 734 QDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPE 793
Q RS + N S+ +K+ +M E + +++ + +E L +
Sbjct: 1108 QALRSEMTDNQNNSKSEAGGLKQ---EIMTLKEEQNKMQKEVNDLLQENEQLMKVMKTKH 1164
Query: 794 EFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENT-----DYPVKDNSSLNPLDRL 848
E S + +++ R + F P + LE+KE + V+ + L +
Sbjct: 1165 ECQNLESEPIRNSVKERESERNQCNFKPQMD-LEVKEISLDSYNAQLVQLEAMLRNKELK 1223
Query: 849 ISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEMETTSGELS 908
+ E +KEK Q + R +T+ L++ S + L E + E +++ + ELS
Sbjct: 1224 LQESEKEKECLQHELQTIRGDLETSNLQDMQSQEISGLKDCEIDAEEKYI---SGPHELS 1280
Query: 909 DVSNDPTTSVCVASAPTK-----EAIDNTLLEHK---------ERSENINLNEKQIPFQV 954
ND C E I L K RSE I K +V
Sbjct: 1281 TSQNDNAHLQCSLQTTMNKLNELEKICEILQAEKYELVTELNDSRSECITATRKMAE-EV 1339
Query: 955 PNIERNFRQSQPKSYLCHYELAEALPQGKMNETPTE 990
+ + S L H EL E +P G+ E P E
Sbjct: 1340 GKLLNEVKILNDDSGLLHGELVEDIPGGEFGEQPNE 1375
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 50/364 (13%)
Query: 76 INSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAP--GS 133
+++Y H H+ R+ E + +++ + + ER +EK + KL E K TV P
Sbjct: 519 MDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEE 578
Query: 134 GPMFKSTTVTVRENCNEISQRVVVDSVNNQQD----FKYTLIHSEENTKDATTVAEDPES 189
KS+ +V EN N+ + + + Q+ K TL + T++A+ AED +
Sbjct: 579 YEEMKSSYCSVIENMNK-EKAFLFEKYQEAQEEIMKLKDTL--KSQMTQEASDEAEDMKE 635
Query: 190 ANN--YTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFS 247
A N N QV + +Q K+A +LE S +D +
Sbjct: 636 AMNRMIDELNKQVSELSQ------------LYKEAQAELEDYRKRKS--LEDVTAEYIHK 681
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALL 307
+ + ++ ++ D L SE K+ + + K+ V Q+ VS + +
Sbjct: 682 AEHEKLMQLTNVSRAKAEDAL--SEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQV 739
Query: 308 LPSFCKFQLQLSSDADNCQN-------SVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
+ + ++ N + V ++ LE D V +S+E L +
Sbjct: 740 ITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQS-- 797
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEV-----------ENKNGPETLAPSNTEEVNI 409
+ ++ + + +E+VK E +EV K +TL S +EVN
Sbjct: 798 ---SLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNE 854
Query: 410 TIHK 413
+ K
Sbjct: 855 LLQK 858
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 50/364 (13%)
Query: 76 INSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAP--GS 133
+++Y H H+ R+ E + +++ + + ER +EK + KL E K TV P
Sbjct: 508 MDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEE 567
Query: 134 GPMFKSTTVTVRENCNEISQRVVVDSVNNQQD----FKYTLIHSEENTKDATTVAEDPES 189
KS+ +V EN N+ + + + Q+ K TL + T++A+ AED +
Sbjct: 568 YEEMKSSYCSVIENMNK-EKAFLFEKYQEAQEEIMKLKDTL--KSQMTQEASDEAEDMKE 624
Query: 190 ANN--YTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFS 247
A N N QV + +Q K+A +LE S +D +
Sbjct: 625 AMNRMIDELNKQVSELSQ------------LYKEAQAELEDYRKRKS--LEDVTAEYIHK 670
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALL 307
+ + ++ ++ D L SE K+ + + K+ V Q+ VS + +
Sbjct: 671 AEHEKLMQLTNVSRAKAEDAL--SEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQV 728
Query: 308 LPSFCKFQLQLSSDADNCQN-------SVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
+ + ++ N + V ++ LE D V +S+E L +
Sbjct: 729 ITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQS-- 786
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEV-----------ENKNGPETLAPSNTEEVNI 409
+ ++ + + +E+VK E +EV K +TL S +EVN
Sbjct: 787 ---SLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNE 843
Query: 410 TIHK 413
+ K
Sbjct: 844 LLQK 847
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 50/364 (13%)
Query: 76 INSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAP--GS 133
+++Y H H+ R+ E + +++ + + ER +EK + KL E K TV P
Sbjct: 487 MDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEE 546
Query: 134 GPMFKSTTVTVRENCNEISQRVVVDSVNNQQD----FKYTLIHSEENTKDATTVAEDPES 189
KS+ +V EN N+ + + + Q+ K TL + T++A+ AED +
Sbjct: 547 YEEMKSSYCSVIENMNK-EKAFLFEKYQEAQEEIMKLKDTL--KSQMTQEASDEAEDMKE 603
Query: 190 ANN--YTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFS 247
A N N QV + +Q K+A +LE S +D +
Sbjct: 604 AMNRMIDELNKQVSELSQ------------LYKEAQAELEDYRKRKS--LEDVTAEYIHK 649
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALL 307
+ + ++ ++ D L SE K+ + + K+ V Q+ VS + +
Sbjct: 650 AEHEKLMQLTNVSRAKAEDAL--SEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQV 707
Query: 308 LPSFCKFQLQLSSDADNCQN-------SVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
+ + ++ N + V ++ LE D V +S+E L +
Sbjct: 708 ITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQS-- 765
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEV-----------ENKNGPETLAPSNTEEVNI 409
+ ++ + + +E+VK E +EV K +TL S +EVN
Sbjct: 766 ---SLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNE 822
Query: 410 TIHK 413
+ K
Sbjct: 823 LLQK 826
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 50/364 (13%)
Query: 76 INSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAP--GS 133
+++Y H H+ R+ E + +++ + + ER +EK + KL E K TV P
Sbjct: 516 MDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEE 575
Query: 134 GPMFKSTTVTVRENCNEISQRVVVDSVNNQQD----FKYTLIHSEENTKDATTVAEDPES 189
KS+ +V EN N+ + + + Q+ K TL + T++A+ AED +
Sbjct: 576 YEEMKSSYCSVIENMNK-EKAFLFEKYQEAQEEIMKLKDTL--KSQMTQEASDEAEDMKE 632
Query: 190 ANN--YTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFS 247
A N N QV + +Q K+A +LE S +D +
Sbjct: 633 AMNRMIDELNKQVSELSQ------------LYKEAQAELEDYRKRKS--LEDVTAEYIHK 678
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALL 307
+ + ++ ++ D L SE K+ + + K+ V Q+ VS + +
Sbjct: 679 AEHEKLMQLTNVSRAKAEDAL--SEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQV 736
Query: 308 LPSFCKFQLQLSSDADNCQN-------SVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
+ + ++ N + V ++ LE D V +S+E L +
Sbjct: 737 ITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQS-- 794
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEV-----------ENKNGPETLAPSNTEEVNI 409
+ ++ + + +E+VK E +EV K +TL S +EVN
Sbjct: 795 ---SLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNE 851
Query: 410 TIHK 413
+ K
Sbjct: 852 LLQK 855
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 50/364 (13%)
Query: 76 INSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAP--GS 133
+++Y H H+ R+ E + +++ + + ER +EK + KL E K TV P
Sbjct: 516 MDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEE 575
Query: 134 GPMFKSTTVTVRENCNEISQRVVVDSVNNQQD----FKYTLIHSEENTKDATTVAEDPES 189
KS+ +V EN N+ + + + Q+ K TL + T++A+ AED +
Sbjct: 576 YEEMKSSYCSVIENMNK-EKAFLFEKYQEAQEEIMKLKDTL--KSQMTQEASDEAEDMKE 632
Query: 190 ANN--YTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFS 247
A N N QV + +Q K+A +LE S +D +
Sbjct: 633 AMNRMIDELNKQVSELSQ------------LYKEAQAELEDYRKRKS--LEDVTAEYIHK 678
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALL 307
+ + ++ ++ D L SE K+ + + K+ V Q+ VS + +
Sbjct: 679 AEHEKLMQLTNVSRAKAEDAL--SEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQV 736
Query: 308 LPSFCKFQLQLSSDADNCQN-------SVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
+ + ++ N + V ++ LE D V +S+E L +
Sbjct: 737 ITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQS-- 794
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEV-----------ENKNGPETLAPSNTEEVNI 409
+ ++ + + +E+VK E +EV K +TL S +EVN
Sbjct: 795 ---SLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNE 851
Query: 410 TIHK 413
+ K
Sbjct: 852 LLQK 855
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/364 (20%), Positives = 141/364 (38%), Gaps = 50/364 (13%)
Query: 76 INSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAP--GS 133
+++Y H H+ R+ E + +++ + + ER +EK + KL E K TV P
Sbjct: 516 MDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEE 575
Query: 134 GPMFKSTTVTVRENCNEISQRVVVDSVNNQQD----FKYTLIHSEENTKDATTVAEDPES 189
KS+ +V EN N+ + + + Q+ K TL + T++A+ AED +
Sbjct: 576 YEEMKSSYCSVIENMNK-EKAFLFEKYQEAQEEIMKLKDTL--KSQMTQEASDEAEDMKE 632
Query: 190 ANN--YTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFS 247
A N N QV + +Q K+A +LE S +D +
Sbjct: 633 AMNRMIDELNKQVSELSQ------------LYKEAQAELEDYRKRKS--LEDVTAEYIHK 678
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKEVSSEKDALL 307
+ + ++ ++ D L SE K+ + + K+ V Q+ VS + +
Sbjct: 679 AEHEKLMQLTNVSRAKAEDAL--SEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQV 736
Query: 308 LPSFCKFQLQLSSDADNCQN-------SVPLADQIPLESVVINEDIPVSGNSFELLGNKS 360
+ + ++ N + V ++ LE D V +S+E L +
Sbjct: 737 ITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQS-- 794
Query: 361 TVLDMSNDCISVQATTEENVKHNEASTTEV-----------ENKNGPETLAPSNTEEVNI 409
+ ++ + + +E+VK E +EV K +TL S +EVN
Sbjct: 795 ---SLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNE 851
Query: 410 TIHK 413
+ K
Sbjct: 852 LLQK 855
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 40.4 bits (93), Expect = 0.010
Identities = 92/421 (21%), Positives = 154/421 (36%), Gaps = 85/421 (20%)
Query: 537 DSGKNENTGQRYKNIS----CKIRETEKYNFTKSQIKQDTLDEKYNKIRLKETHEYWFHK 592
D+ +NE T + K+ S +I ETE TKS K D D + NK KE E +
Sbjct: 134 DTAENETTEKEEKSESRQERYEIEETE--TVTKSYQKNDWRDAEENKKEDKEKEE----E 187
Query: 593 SRRKKKRKKLCQHHHMEK-TKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLD 651
K KR + ++ EK TK R K++ +K E++ D
Sbjct: 188 EEEKPKRGSIGENQGEEKGTKVQAKREKLQ-----------------EDKPTFKKEEIKD 230
Query: 652 SHQLLDKRPKSESISLSDNEE---MCKTWNTEYNTYDTISSKNHCK----KNTILLNGQS 704
DK PK E S D ++ K+ N E+ T+ ++N + ++
Sbjct: 231 EKIKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTFSRPGGRASVDTKEAE 290
Query: 705 NATMIHSGK--------HNLTYSRTYCCWKTKMSSCS---------QDHRSLVLQNDMKH 747
A + +GK T S + K K + ++ R VL+ + +
Sbjct: 291 GAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQR 350
Query: 748 MSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPEEFLRPPSTSVAPCK 807
Q +A ++ + E E ++R + E+ ++ +PE+ L K
Sbjct: 351 RKQEEADRK-----LREEEE--KRRLKEEIERRRAEAAEKRQKMPEDGLSDDK------K 397
Query: 808 PKKKRRRKRGRFHPGFETLELKENTDYPVKDNSSLNPLDRLISEDKKEKMKPQEVAKIER 867
P K F P +L+++E ++ K S K + V+KI+
Sbjct: 398 PFK-------CFTPKGSSLKIEERAEFLNKSVQK--------SSGVKSTHQAAIVSKIDS 442
Query: 868 NSEQ-TNQLRNKLSFHPNNLLPSETNGETEHLEMETTSGELSDVSNDPTTSVCVASAPTK 926
EQ T+ + S P S+ E + + E +V + PT A P K
Sbjct: 443 RLEQYTSAIEGTKSAKPTKPAASDLPVPAEGVRNIKSMWEKGNVFSSPT----AAGTPNK 498
Query: 927 E 927
E
Sbjct: 499 E 499
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 40.4 bits (93), Expect = 0.010
Identities = 92/421 (21%), Positives = 154/421 (36%), Gaps = 85/421 (20%)
Query: 537 DSGKNENTGQRYKNIS----CKIRETEKYNFTKSQIKQDTLDEKYNKIRLKETHEYWFHK 592
D+ +NE T + K+ S +I ETE TKS K D D + NK KE E +
Sbjct: 140 DTAENETTEKEEKSESRQERYEIEETE--TVTKSYQKNDWRDAEENKKEDKEKEE----E 193
Query: 593 SRRKKKRKKLCQHHHMEK-TKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLD 651
K KR + ++ EK TK R K++ +K E++ D
Sbjct: 194 EEEKPKRGSIGENQGEEKGTKVQAKREKLQ-----------------EDKPTFKKEEIKD 236
Query: 652 SHQLLDKRPKSESISLSDNEE---MCKTWNTEYNTYDTISSKNHCK----KNTILLNGQS 704
DK PK E S D ++ K+ N E+ T+ ++N + ++
Sbjct: 237 EKIKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTFSRPGGRASVDTKEAE 296
Query: 705 NATMIHSGK--------HNLTYSRTYCCWKTKMSSCS---------QDHRSLVLQNDMKH 747
A + +GK T S + K K + ++ R VL+ + +
Sbjct: 297 GAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQR 356
Query: 748 MSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPEEFLRPPSTSVAPCK 807
Q +A ++ + E E ++R + E+ ++ +PE+ L K
Sbjct: 357 RKQEEADRK-----LREEEE--KRRLKEEIERRRAEAAEKRQKMPEDGLSDDK------K 403
Query: 808 PKKKRRRKRGRFHPGFETLELKENTDYPVKDNSSLNPLDRLISEDKKEKMKPQEVAKIER 867
P K F P +L+++E ++ K S K + V+KI+
Sbjct: 404 PFK-------CFTPKGSSLKIEERAEFLNKSVQK--------SSGVKSTHQAAIVSKIDS 448
Query: 868 NSEQ-TNQLRNKLSFHPNNLLPSETNGETEHLEMETTSGELSDVSNDPTTSVCVASAPTK 926
EQ T+ + S P S+ E + + E +V + PT A P K
Sbjct: 449 RLEQYTSAIEGTKSAKPTKPAASDLPVPAEGVRNIKSMWEKGNVFSSPT----AAGTPNK 504
Query: 927 E 927
E
Sbjct: 505 E 505
>gi|139394648 DNA polymerase theta [Homo sapiens]
Length = 2590
Score = 39.7 bits (91), Expect = 0.018
Identities = 65/373 (17%), Positives = 136/373 (36%), Gaps = 56/373 (15%)
Query: 136 MFKSTTVTVRENCNEISQRVVVDSVNNQ-----QDFKYTLIHSEENTKDATTVAEDPESA 190
+ S+T ++ + +E+ + + + K I S+ K + + +D +
Sbjct: 903 LLHSSTCSLTHSESEVKEHTFISQTKSSYKKLTSKNKSNTIFSDSYIKHSPNIVQDLNKS 962
Query: 191 NNYTAKNNQVGDQAQGIHRHKIGFSFAFPKKASVKLESSAAAFSEY---SDDASVGKGFS 247
+T+ N + G H+ F K+AS+ + S+ + D V + FS
Sbjct: 963 REHTSSFNC--NFQNGNQEHQTCSIFRARKRASLDINKEKPGASQNEGKTSDKKVVQTFS 1020
Query: 248 RKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHPPEAMCRDKETVQTQEIKE-----VSSE 302
+K++ P + +SE+ + SF + K + + +K+ + +
Sbjct: 1021 QKTKKAP------------LNFNSEKMSRSFRSWKRRKHLKRSRDSSPLKDSGACRIHLQ 1068
Query: 303 KDALLLPSFCKFQLQLSSDADNCQNSVPLADQIPLESVVINEDIPVSGNSFELLGNKSTV 362
L PS C+ L +NS P A + L E + ++ N S
Sbjct: 1069 GQTLSNPSLCEDPFTLDEKKTEFRNSGPFAKNVSLSG---KEKDNKTSFPLQIKQNCSWN 1125
Query: 363 LDMSNDCISVQATTEENVKHNEASTTEVENKNG----------PETLAPSNTEEVNI--- 409
+ ++ND T K+ T V ++ G E L + ++ N+
Sbjct: 1126 ITLTNDNFVEHIVTGSQSKNVTCQATSVVSEKGRGVAVEAEKINEVLIQNGSKNQNVYMK 1185
Query: 410 --TIHKKTNFCKRQCEPFVPVLNKHRSTV-LQWPSEML-VYTTTKPSISYSCNPLCFDFK 465
IH + ++Q + K ++ + Q P E + Y +++ +C
Sbjct: 1186 HHDIHPINQYLRKQSHEQTSTITKQKNIIERQMPCEAVSSYINRDSNVTINCE------- 1238
Query: 466 STKVNNNLDKNKP 478
++ N ++NKP
Sbjct: 1239 --RIKLNTEENKP 1249
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 39.7 bits (91), Expect = 0.018
Identities = 47/157 (29%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 1070 PPAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQ 1129
P AA PP +T QP P L S+ + + Q +A A + F + Q
Sbjct: 653 PQAAAPPQATTPQPSP---GLASSPEKIV---LGQPPSATPTAILTQDSLQMFLPQERSQ 706
Query: 1130 QFLS------QIPALTRTSLPQLSVGPV-------GPRLCPGNQPTFVAPPQMPIIPAS- 1175
Q LS +PA S P + P G L P + +P P IPA+
Sbjct: 707 QPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAA 766
Query: 1176 -VLHPSHLAFPSLPHAL----FPSLLSPHPTVIPLQP 1207
+ P + PSLPH P L SPHPT P +P
Sbjct: 767 PLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRP 803
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 39.7 bits (91), Expect = 0.018
Identities = 101/506 (19%), Positives = 188/506 (37%), Gaps = 76/506 (15%)
Query: 519 KCSQVTPL---LADDILSSSCDSGKNENTGQRYKNISCKIRETEKYNFTKSQIKQDTLDE 575
KCSQ+ L L + I++ S + KN Q + KIR E N K E
Sbjct: 695 KCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLET-NINTEHEKICLAFE 753
Query: 576 KYNKIRLKETHEYWFH----------KSRRKKKRKK---------LCQHHHMEKTKE--S 614
K KI L++ E K ++ K+++K +C+ HH+E +
Sbjct: 754 KAKKIHLEQHKEMEKQIERLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLT 813
Query: 615 ETRCKMEAENSYTENAGKYLLEPISEK-----------QYLAAEQLLDSHQLLDKRPKSE 663
E++ +M+ EN + A K L +SE+ + E +L +QL + K E
Sbjct: 814 ESKGEMKKENMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFE 873
Query: 664 SISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHSGKHNLTYSRTYC 723
+EE+ Y + KNH + T + N + +H L +
Sbjct: 874 KQLKKKSEEV-------YCLQKELKIKNHSLQET----SEQNVIL----QHTLQQQQQML 918
Query: 724 CWKTKMSSCSQDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDE 783
+T + +D ++ L+ + + Q +R S RK + S + +
Sbjct: 919 QQETIRNGELEDTQT-KLEKQVSKLEQELQKQR------ESSAEKLRKMEEKCESAAHEA 971
Query: 784 SLNRQNHLP-EEFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENTDYPVKDNSSL 842
L RQ + R + K + + K E + LK + + L
Sbjct: 972 DLKRQKVIELTGTARQVKIEMDQYKEELSKMEK--------EIMHLKRDGE---NKAMHL 1020
Query: 843 NPLDRLISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEMET 902
+ LD ++ + K E K K + + + + +L ET + H E+++
Sbjct: 1021 SQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEALQKREVL--ETELQNAHGELKS 1078
Query: 903 TSGELSDVSNDPTTSVCVASAPTKEAIDNTLLEHKERSENINLNEKQIPFQVPNI--ERN 960
T +L ++ D ++ I + E +E I ++KQ ++ ERN
Sbjct: 1079 TLRQLQEL-RDVLQKAQLSLEEKYTTIKDLTAELRECKMEIE-DKKQELLEMDQALKERN 1136
Query: 961 FRQSQPKSYLCHYELAEALPQGKMNE 986
+ Q + + H ++ +G+M +
Sbjct: 1137 WELKQRAAQVTHLDMTIREHRGEMEQ 1162
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 39.3 bits (90), Expect = 0.023
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 1070 PPAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQ 1129
PP PP L+P P SL S S T + A++ AAAAAAAA L
Sbjct: 58 PPERAEPPPDSLRPRPA--SLSSASSTPASSSTSASSASSCAAAAAAAALAGLSALP--- 112
Query: 1130 QFLSQIPALTRTSLPQLSVGPVGPR-LCPG 1158
+SQ+P + ++ P+ P+ LC G
Sbjct: 113 --VSQLPVFAPLAAAAVAAEPLPPKELCLG 140
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 39.3 bits (90), Expect = 0.023
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 1082 QPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTRT 1141
QP PLQ+++ H ++ Q A A A A G V S PA T
Sbjct: 1230 QPRPLQRNVVHLVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGL 1289
Query: 1142 SLPQLSVGPVGPRLCPGNQPTFVAPPQMP---IIPASVLHPSHLAFPSLPHALFPSLLSP 1198
SLP L+ V P + + Q P + P L P+ P P + P++L+P
Sbjct: 1290 SLP-LAANQVPPTMVNNTGVVKIVVRQAPRDGLTPVPPLAPA----PRPPSSGLPAVLNP 1344
Query: 1199 HPTVIP 1204
PT+ P
Sbjct: 1345 RPTLTP 1350
Score = 30.8 bits (68), Expect = 8.1
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 31/135 (22%)
Query: 1071 PAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQ 1130
P++LP P++ P+P L S +T+ + + A A+
Sbjct: 1404 PSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASA---------- 1453
Query: 1131 FLSQIPALTRTSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHA 1190
P S P L+V GP L T V PP P++PA+ PS
Sbjct: 1454 -----PLTIPISAP-LTVSASGPALL-----TSVTPPLAPVVPAAPGPPS---------- 1492
Query: 1191 LFPSLLSPHPTVIPL 1205
L PS SP + + L
Sbjct: 1493 LAPSGASPSASALTL 1507
>gi|193788649 retinoic acid induced 2 [Homo sapiens]
Length = 530
Score = 39.3 bits (90), Expect = 0.023
Identities = 57/205 (27%), Positives = 81/205 (39%), Gaps = 43/205 (20%)
Query: 1013 SGHTFVTAEQILAPLALPEQALLIPLENHDKFKNVPCEVYQHILQPNMLANKVKFTFPPA 1072
SG A +L PL L E +++P+ + + P L PN A V T P
Sbjct: 67 SGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAP------ELNPNGNATYVMTTQGPV 120
Query: 1073 ALPPP---------STPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFK 1123
LP ++PL LP Q++ CS+S TIH+ + Q A A +
Sbjct: 121 QLPVVLEQHVFQHLNSPLV-LP-QEAPCSSS--TIHNNLFQ----GAEDPEAQPQLLDLR 172
Query: 1124 VLQPHQQFLSQIPALTRTSLPQLSVGPVGPRLC---PGNQPTFVAPPQMPIIPASVLHPS 1180
+ Q+ A+ + P S G +GP C PG P PPQ P S L P
Sbjct: 173 IPSQPQEPTLPFEAVLQNLFP--SQGTLGPPPCQPPPGYAPV---PPQPFSSPLSPLVPP 227
Query: 1181 HLAFPSLPHALFPSLLSPHPTVIPL 1205
+LL P+P ++PL
Sbjct: 228 ------------ATLLVPYPVIVPL 240
>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
sapiens]
Length = 576
Score = 39.3 bits (90), Expect = 0.023
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 472 NLDKNKPDLKDLCSQQKQEDICMGPLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDI 531
NL+K +L+++ ++ ++E G SD ++ L D E G ++ L DD+
Sbjct: 263 NLEK---ELQEMEARYEKE---FGDGSDENEMEEHELKDEEDGKDSDEAEDAE--LYDDL 314
Query: 532 LSSSCDSG-------KNENTGQRYKNISCKIR---ETEKYNFTKSQIKQDTLDEKYNKIR 581
+CD KN ++++ + ++ E E+ NF++ QI ++ LD+ ++
Sbjct: 315 YCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEEEEENFSRPQIDENPLDDN-SEEE 373
Query: 582 LKETHEYWFHKSRRKKKRK 600
+++ + K ++KKK+K
Sbjct: 374 MEDAPKQKLSKKQKKKKQK 392
Score = 33.1 bits (74), Expect = 1.6
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 52 DLKANFYCELCDKQYYKHQEFDNHINSYDHAH-----KQRLKELKQREFARNVASKSRKD 106
+L + YC CDK + + NH S H KQ+L+E ++ F+R ++ D
Sbjct: 309 ELYDDLYCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEE-EEENFSRPQIDENPLD 367
Query: 107 ERKQEK----ALQRLHKLAELRKE 126
+ +E+ Q+L K + +K+
Sbjct: 368 DNSEEEMEDAPKQKLSKKQKKKKQ 391
>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
sapiens]
Length = 531
Score = 39.3 bits (90), Expect = 0.023
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 472 NLDKNKPDLKDLCSQQKQEDICMGPLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDI 531
NL+K +L+++ ++ ++E G SD ++ L D E G ++ L DD+
Sbjct: 263 NLEK---ELQEMEARYEKE---FGDGSDENEMEEHELKDEEDGKDSDEAEDAE--LYDDL 314
Query: 532 LSSSCDSG-------KNENTGQRYKNISCKIR---ETEKYNFTKSQIKQDTLDEKYNKIR 581
+CD KN ++++ + ++ E E+ NF++ QI ++ LD+ ++
Sbjct: 315 YCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEEEEENFSRPQIDENPLDDN-SEEE 373
Query: 582 LKETHEYWFHKSRRKKKRK 600
+++ + K ++KKK+K
Sbjct: 374 MEDAPKQKLSKKQKKKKQK 392
Score = 33.1 bits (74), Expect = 1.6
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 52 DLKANFYCELCDKQYYKHQEFDNHINSYDHAH-----KQRLKELKQREFARNVASKSRKD 106
+L + YC CDK + + NH S H KQ+L+E ++ F+R ++ D
Sbjct: 309 ELYDDLYCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEE-EEENFSRPQIDENPLD 367
Query: 107 ERKQEK----ALQRLHKLAELRKE 126
+ +E+ Q+L K + +K+
Sbjct: 368 DNSEEEMEDAPKQKLSKKQKKKKQ 391
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 38.9 bits (89), Expect = 0.030
Identities = 30/67 (44%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 1070 PPAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQPHQ 1129
P A PPP P QP P Q S H +Q+ AA AAAAAAAAAA V +
Sbjct: 185 PTAPQPPPHLPSQP-PQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAAVGSVGR--- 240
Query: 1130 QFLSQIP 1136
LSQ P
Sbjct: 241 --LSQFP 245
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 38.1 bits (87), Expect = 0.051
Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 25/143 (17%)
Query: 1068 TFPPAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQP 1127
T PP PP + P+ + SL S S+ A ++ A + G+ LQ
Sbjct: 373 TTPPMQAPPSLQTIPPIQVPHSLTSPSLQA------PPSPLALSSLQATTSLGS-PTLQA 425
Query: 1128 HQQFLSQIPALTRTSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSL 1187
FL+ P T+ SL P P P + P AP +P A P L
Sbjct: 426 THSFLTMSPRQTQASL----TSPSRPASTPPDSPPLQAPLSLP------------ASPPL 469
Query: 1188 PHALFPSL--LSPHPTVIPLQPL 1208
+L P++ LS T+ PLQ L
Sbjct: 470 QTSLSPAVSPLSSPLTIHPLQAL 492
Score = 32.0 bits (71), Expect = 3.7
Identities = 46/173 (26%), Positives = 65/173 (37%), Gaps = 40/173 (23%)
Query: 1071 PAALPPPSTPLQ-PL------PLQQSLC-STSVTTIHHTVLQQHAAAAAAAAAAAAAGTF 1122
PA+ PP S PLQ PL PLQ SL + S + T+ A ++ A+ + A +
Sbjct: 447 PASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSS 506
Query: 1123 KVLQPHQQFLSQIPALTRT-----------SLPQLSVGPVGPRLCPGNQPTFVAPP---- 1167
++ P + S P +T +LP L+ P+ P P PP
Sbjct: 507 LIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAP 566
Query: 1168 ------------QMPIIPASVLHPSHLAFPSLPHALFPSLLSPHPTVIPLQPL 1208
P P+S+ P A P+L L SP PL PL
Sbjct: 567 CPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSP-----PLSPL 614
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 38.1 bits (87), Expect = 0.051
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 35/162 (21%)
Query: 1070 PPAALPPPSTPLQPLPLQQ----SLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVL 1125
PP + P S+P + +P Q+ + S V ++ V + +AA A G L
Sbjct: 833 PPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVSPAVPTPPSMSAALPFPAGGLGMPPSL 892
Query: 1126 QPHQQFLSQIPALTRTSLPQLSVGPV----------------GPRLCPGNQPTFVAPPQM 1169
P P L SLP LS+GPV P + P P PP +
Sbjct: 893 PP--------PPLQPPSLP-LSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPTV 943
Query: 1170 PIIPASVLHPSHLAFP---SLPHALFPSLLSPHPTVIPLQPL 1208
P++ + P A P S+P A P+ +SP+ + PL
Sbjct: 944 PLVSGT---PGAYAVPPTCSVPWAPPPAPVSPYSSTCTYGPL 982
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 37.7 bits (86), Expect = 0.067
Identities = 103/498 (20%), Positives = 178/498 (35%), Gaps = 47/498 (9%)
Query: 332 ADQIPLESVVINEDIPVSGNSFELLGNKSTVLDMSNDCISVQATTEENVKHNEASTTEVE 391
AD+ PL+S NE S +S E +S +C +N K + +T +
Sbjct: 158 ADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSK--KTNTEFLH 215
Query: 392 NKNGP-ETLAPSNTEEVNITIHKKTNFCKRQCEPFVPVLNKHRSTVLQWPSEMLVYTTTK 450
KN P + L S T I+ N F+ ++ + + + + + Y+
Sbjct: 216 TKNNPKKDLKRSKTSNDPISEICSENSLN---VDFLMLVGQSDDESINFDAWLRNYSQNN 272
Query: 451 PSISYSCNPLCFDFKSTKVN--NNLDKNKPDLKDLCSQQKQEDICMGPLSDYKDVSTE-G 507
S +YS + K TK N + D D KD K+ + KDV +
Sbjct: 273 -SKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTE 331
Query: 508 LTDYEIGSSKNKCSQVTPLLADDILSSSCDSGKNENTGQRYKNISCKIRETEKYNFTKSQ 567
TD E G SK D K+ ++ K ++T+KY +
Sbjct: 332 STDAESGDSK-------------------DERKDTKKDKKKLKKDDKKKDTKKYPESTDT 372
Query: 568 IKQDTLDEKYNKIRLKETHEYWFHKSRRKKKRKKLCQHHHME---KTKESETRCKMEAEN 624
D D + + LK+ + +KK KK+ E ++KES+ K + ++
Sbjct: 373 ESGDAKDARNDSRNLKKASK----NDDKKKDAKKITFSTDSESELESKESQKDEKKDKKD 428
Query: 625 SYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRPKSESISLSDNEEMCKTWNTEYNTY 684
S T+N K ++ E +E DS + K + S D+++ N E
Sbjct: 429 SKTDN--KKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEM 486
Query: 685 DTISSKNHCKKNTILLNGQSNATMIHSGKHNLT-------YSRTYCCWKTKM-SSCSQDH 736
++ KK++ G + K + S+T TK+ S ++
Sbjct: 487 ESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESE 546
Query: 737 RSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPEEFL 796
SL K + ++ ES+R +R + + E + +P
Sbjct: 547 ESLYKPGAKKKIDESDGTSANSKMEGLESKRGFRMSSKKTTFNEKGEKAS-TGRVPPSRE 605
Query: 797 RPPSTSVAPCKPKKKRRR 814
+PP + P P K RR
Sbjct: 606 KPPLPACEPSLPSPKVRR 623
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 37.7 bits (86), Expect = 0.067
Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 11/180 (6%)
Query: 7 VISSTHLSNGHFRNIKGVFRGPLSKNGNK------TLDYAEKENTIAKALEDLKANFYCE 60
++S + N + G F P + K L+ ++EN +A +D +CE
Sbjct: 218 LVSENEMMNEKLDQLDGSFDDPNTVVAKKYFHAQLQLEQLQEENFRLEAAKD-DYRVHCE 276
Query: 61 LCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKL 120
+KQ + Q ++ + S + E+ + R + K+ K E E Q+L L
Sbjct: 277 ELEKQLIEFQHRNDELTSLAEETRALKDEI---DVLRATSDKANKLESTVEIYRQKLQDL 333
Query: 121 AELRKETVCAPGSGPMFKSTTVTVRENCNEI-SQRVVVDSVNNQQDFKYTLIHSEENTKD 179
+LRK+ + M+ TV++ E + + R +++ Q + + SE D
Sbjct: 334 NDLRKQVKTLQETNMMYMHNTVSLEEELKKANAARTQLETYKRQVQDLHVKLSSESKRAD 393
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 37.7 bits (86), Expect = 0.067
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 15/151 (9%)
Query: 1070 PPAALPPPSTPLQPLPLQQ--SLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTFKVLQ- 1126
PP PPP P PLP Q S S + + ++ + + A+ + A T V+Q
Sbjct: 635 PPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQS 694
Query: 1127 ---------PHQQFLSQIPALTRTSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVL 1177
P + P P ++ + P C + P F APP P+ V
Sbjct: 695 QSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPP-PLKIHQVQ 753
Query: 1178 HPSHLAFPSLPHALFPSLLSPHPTVIPLQPL 1208
H + +A P+ P P + +P P P +PL
Sbjct: 754 HITQVAPPTPPPP--PPIPAPLPPQAPPKPL 782
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 37.4 bits (85), Expect = 0.087
Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 37/315 (11%)
Query: 587 EYWFHKSRRKKKRKKLCQHHHMEKTKESETRCKMEAENSYTENAGKYLLEPISEKQYLAA 646
EY F ++ K + H + K + E + E + + + + + K+ +
Sbjct: 337 EYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPS 396
Query: 647 EQLLDSHQLLDKRPKSESISLSDNEEMCKTWNTEYNTY-DTISSKNHCKKNTI---LLNG 702
L S + D+ + + +T N++ T + + S H +K + L N
Sbjct: 397 RVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLKNQ 456
Query: 703 QSNAT-----MIHSGKHNLTYSRTY------CCWKTK------MSSCSQDHRSLVLQNDM 745
N GK N + C KT+ S +D SL L
Sbjct: 457 NKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLF--- 513
Query: 746 KHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDE-----SLNRQNHLPEEFLRPPS 800
H+S ++ K +S ++ + S S E L R ++ EFL P S
Sbjct: 514 -HISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFL-PES 571
Query: 801 TSVAPCKPKKKRRRKRGRFHPGF---ETLELKENTDYPVKDNS--SLNPLDRLISEDKKE 855
+SV CK K+K + ++ FH F ++K+ P +NS +L +D+ KK
Sbjct: 572 SSVKSCKHKEKSKHQKD-FHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKH 630
Query: 856 KMKPQEVAKIERNSE 870
K+K +E K + E
Sbjct: 631 KLKHKEREKEKHKKE 645
Score = 36.6 bits (83), Expect = 0.15
Identities = 91/489 (18%), Positives = 178/489 (36%), Gaps = 78/489 (15%)
Query: 463 DFKSTKVNN-NLDKNKPDLKDLCSQQKQEDICMGPLSDYKDVSTEGLTDYEIGSSKNKCS 521
D KSTK + + ++N + +D ++ ++ + D K+ TD + + S
Sbjct: 709 DDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMS 768
Query: 522 QVTPLLADDILSSSCDSGKNENTGQRYKNISCKIRETEKYNFTKSQIKQDTLDEKYNKIR 581
+ + ++ D K E I+E+++ +SQIK+ +++ K
Sbjct: 769 AIEESIGLHLVEKEIDIEKQEK----------HIKESKEKPEKRSQIKEKDIEKMERKTF 818
Query: 582 LKETHEYWFHKSRRKK----------KRKKLCQHHHMEKTKESETRCKMEA--------E 623
KE HKS + K K K HH EK + + K A E
Sbjct: 819 EKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDRE 878
Query: 624 NSYTENAGKYLLEPISEKQYLAAEQLLDSHQLLDKRPKSESISLSDNEEMCKTWNTEYNT 683
S + K+ E ++++LA + L++K+ K SDN E K+ +
Sbjct: 879 KSREKMDRKHDKEKPEKERHLAESK---EKHLMEKKNKQ-----SDNSEYSKSEKGKNKE 930
Query: 684 YDTISSKNHCKKNTILLNGQSNATMIHSGKHNLTYSRTYCCWKTKMSSCSQDHRSLVLQN 743
D K ++ +N I + KH ++ K +Q + L L+
Sbjct: 931 KDRELDKKEKSRDKESIN-------ITNSKHIQEEKKSSIVDGNK----AQHEKPLSLKE 979
Query: 744 DMKHMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPEEFLRPPSTSV 803
K + + + +R Y++R +H + L ++ + +P S+
Sbjct: 980 KTKDEPLKTPDGKEKDKKDKDIDR-YKERDKHKDKIQINSLLKLKSEADKP--KPKSSPA 1036
Query: 804 A-PCKPKKKRRRKRGRFHPGFETLELKENTDYPVKDNSSLNPLDRLISEDKKEKMKPQEV 862
+ +PK+KR V D+ +R++S E + +
Sbjct: 1037 SKDTRPKEKRL----------------------VNDDLMQTSFERMLSLKDLEIEQWHKK 1074
Query: 863 AKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEMETTSGELSDVSNDPTTSVCVAS 922
K + ++ +LRN+ L + +T+H E+ + EL+ + T
Sbjct: 1075 HKEKIKQKEKERLRNRNCLE----LKIKDKEKTKHTPTESKNKELTRSKSSEVTDAYTKE 1130
Query: 923 APTKEAIDN 931
K+A+ N
Sbjct: 1131 KQPKDAVSN 1139
Score = 35.4 bits (80), Expect = 0.33
Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 13/182 (7%)
Query: 592 KSRRKKKRKKLCQHHHMEKTKESETRCKMEAENSYTENAGKYLLEPISEKQYLAAEQLLD 651
KS + K++ K + H+E ++S + K E + EN+ L + E + L +L
Sbjct: 575 KSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKH 634
Query: 652 SHQLLDKRPKSESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILLNGQSNATMIHS 711
+ +K K + +E KT ++ ++ K + ++ ++
Sbjct: 635 KEREKEKHKK----EIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNM 690
Query: 712 GKHNLTYSRTYCCWKTKMSSCSQDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYRK 771
+LT + K+K+ +D +S KH+S+ + K + + ESE+ +R+
Sbjct: 691 EHESLTLEK-----KSKLEKNIKDDKS----TKEKHVSKERNFKEERDKIKKESEKSFRE 741
Query: 772 RR 773
+
Sbjct: 742 EK 743
Score = 34.3 bits (77), Expect = 0.74
Identities = 78/404 (19%), Positives = 141/404 (34%), Gaps = 92/404 (22%)
Query: 35 KTLDYAEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELKQRE 94
K +D ++E I ++ E + + D + + + F+ H HK +L E
Sbjct: 781 KEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFEKE-KKIKHEHKSEKDKLDLSE 839
Query: 95 FARNVASKSRKDERKQEKALQRLHKLAELRKETVCAPGSGPMFKSTTVTVRENCNEISQR 154
+ K + EK HK E K T + KS R+
Sbjct: 840 CVDKIKEKDKLYSHHTEKC----HKEGEKSKNTAAIKKTDDREKSREKMDRK-------- 887
Query: 155 VVVDSVNNQQDFKYTLIHSEENTKDATTVAEDPESANNYTAKNNQVGDQAQGIHRHKIGF 214
H +E + +AE E + K N+ D ++
Sbjct: 888 -----------------HDKEKPEKERHLAESKEK--HLMEKKNKQSDNSE--------- 919
Query: 215 SFAFPKKASVKLESSAAAFSEYSDDASVGKGFSRKSRFVPSACHLQQSSPTDVL------ 268
++ +K K + E S D ++S + ++ H+Q+ + ++
Sbjct: 920 -YSKSEKGKNKEKDRELDKKEKSRD--------KESINITNSKHIQEEKKSSIVDGNKAQ 970
Query: 269 ----LSSEEKTNS--FHPPEAMCRDKETVQTQEIKEVSSEKDALLLPSFCKFQLQLSSDA 322
LS +EKT P+ +DK+ KE KD + + S K L+ +D
Sbjct: 971 HEKPLSLKEKTKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLK--LKSEADK 1028
Query: 323 DNCQNSVPLADQIPLESVVINEDIPVSGNSFE-LLGNKSTVLDM---------------- 365
++S D P E ++N+D+ SFE +L K ++
Sbjct: 1029 PKPKSSPASKDTRPKEKRLVNDDL--MQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKER 1086
Query: 366 --SNDCISVQATTEENVKHNEASTTEVENKNGPETLAPSNTEEV 407
+ +C+ ++ +E KH T E+KN + L S + EV
Sbjct: 1087 LRNRNCLELKIKDKEKTKH-----TPTESKN--KELTRSKSSEV 1123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,277,577
Number of Sequences: 37866
Number of extensions: 2405290
Number of successful extensions: 11701
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 10910
Number of HSP's gapped (non-prelim): 962
length of query: 1209
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1095
effective length of database: 13,930,794
effective search space: 15254219430
effective search space used: 15254219430
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.