| Name: POLQ | Sequence: fasta or formatted (2590aa) | NCBI GI: 139394648 | |
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Description: DNA polymerase theta
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.4 140 4 C cysteine 1.9 50 1 D aspartate 4.7 123 2 E glutamate 7.2 187 4 F phenylalanine 3.9 100 2 G glycine 5.9 153 2 H histidine 2.5 64 2 I isoleucine 5.7 148 2 K lysine 6.9 178 2 L leucine 10.4 270 3 M methionine 2.2 58 1 N asparagine 4.7 123 2 P proline 4.2 109 3 Q glutamine 5.4 141 2 R arginine 4.9 128 3 S serine 9.9 257 4 T threonine 5.1 131 2 V valine 6.1 158 3 W tryptophan 0.9 23 1 Y tyrosine 1.9 49 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 DNA polymerase theta HELQ 0.077 DNA helicase HEL308 POLN 0.040 DNA-directed DNA polymerase nu LOC652147 0.022 PREDICTED: similar to U5 snRNP-specific 200kD prote... SNRNP200 0.022 activating signal cointegrator 1 complex subunit 3-l... HFM1 0.022 HFM1 protein ASCC3 0.019 activating signal cointegrator 1 complex subunit 3 i... SKIV2L2 0.016 superkiller viralicidic activity 2-like 2 SKIV2L 0.013 superkiller viralicidic activity 2-like homolog [Hom... DDX60 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 DDX60L 0.009 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Hom... DDX20 0.005 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 RECQL4 0.005 RecQ protein-like 4 EIF4A1 0.004 eukaryotic translation initiation factor 4A isoform 1... EIF4A2 0.004 eukaryotic translation initiation factor 4A2 WRN 0.004 Werner syndrome protein LOC652522 0.004 PREDICTED: similar to Werner syndrome ATP-dependent... DDX58 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I [... EIF4A3 0.004 eukaryotic translation initiation factor 4A, isoform ... DDX6 0.003 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 DDX50 0.003 nucleolar protein GU2 DDX41 0.003 DEAD-box protein abstrakt ZNF804A 0.003 zinc finger protein 804A DHX58 0.003 RNA helicase LGP2 IFIH1 0.003 interferon induced with helicase C domain 1 DDX42 0.003 DEAD box polypeptide 42 protein DDX42 0.003 DEAD box polypeptide 42 protein CASC5 0.003 cancer susceptibility candidate 5 isoform 2 CIR1 0.003 CBF1 interacting corepressor SAMD9L 0.003 sterile alpha motif domain containing 9-likeHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
