Guide to the Human Genome
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Name: ZNF804B Sequence: fasta or formatted (1349aa) NCBI GI: 31791053
Description:

zinc finger protein 804B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         57           2
 C cysteine            3.5         47           2
 D aspartate           4.7         63           2
 E glutamate           6.2         83           2
 F phenylalanine       3.5         47           1
 G glycine             3.3         45           2
 H histidine           5.0         68           2
 I isoleucine          4.9         66           2
 K lysine              8.8        119           2
 L leucine             8.7        117           3
 M methionine          1.1         15           1
 N asparagine          6.1         82           2
 P proline             5.8         78           2
 Q glutamine           5.9         79           3
 R arginine            4.2         57           2
 S serine             12.1        163           3
 T threonine           5.9         79           2
 V valine              3.5         47           1
 W tryptophan          0.4          5           1
 Y tyrosine            2.4         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 804B 
ZNF804A               0.099   zinc finger protein 804A 
GPATCH8               0.082   G patch domain containing 8 
KIAA1853              0.007   KIAA1853 protein 
LOC100132614          0.007   PREDICTED: hypothetical protein, partial 
MUC4                  0.006   mucin 4 isoform a 
KIF15                 0.006   kinesin family member 15 
JMJD1C                0.005   jumonji domain containing 1C isoform a 
JMJD1C                0.005   jumonji domain containing 1C isoform b 
CENPF                 0.005   centromere protein F 
LOC100288473          0.005   PREDICTED: hypothetical protein XP_002343336 
LOC729815             0.005   PREDICTED: hypothetical protein 
MNT                   0.005   MAX binding protein 
LOC729815             0.004   PREDICTED: hypothetical protein 
ZRANB2                0.004   zinc finger protein 265 isoform 2 
TCERG1                0.004   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.004   transcription elongation regulator 1 isoform 1 [Homo...
MYH15                 0.004   myosin, heavy polypeptide 15 
NOLC1                 0.004   nucleolar and coiled-body phosphoprotein 1 
ZRANB2                0.004   zinc finger protein 265 isoform 1 
LOC100129144          0.003   PREDICTED: similar to hCG2042189 
LOC100129144          0.003   PREDICTED: similar to hCG2042189 
LOC100129144          0.003   PREDICTED: hypothetical protein LOC100129144 
ANKRD12               0.003   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.003   ankyrin repeat domain 12 isoform 1 
MLLT3                 0.003   myeloid/lymphoid or mixed-lineage leukemia (trithor...
ZNF829                0.003   zinc finger protein 829 
FAM133A               0.003   hypothetical protein LOC286499 
CAMK2D                0.003   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.003   calcium/calmodulin-dependent protein kinase II delta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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