Guide to the Human Genome
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Name: ZNF804A Sequence: fasta or formatted (1209aa) NCBI GI: 34740327
Description:

zinc finger protein 804A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         69          13
 C cysteine            2.6         32           2
 D aspartate           4.1         50           2
 E glutamate           7.9         96           2
 F phenylalanine       3.4         41           1
 G glycine             2.8         34           1
 H histidine           3.8         46           3
 I isoleucine          3.6         44           2
 K lysine              8.7        105           3
 L leucine             8.9        107           3
 M methionine          1.6         19           1
 N asparagine          6.9         84           3
 P proline             6.5         78           3
 Q glutamine           5.5         67           2
 R arginine            4.0         48           3
 S serine              9.6        116           3
 T threonine           6.5         78           3
 V valine              4.7         57           3
 W tryptophan          0.4          5           1
 Y tyrosine            2.7         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 804A 
ZNF804B               0.111   zinc finger protein 804B 
GPATCH8               0.099   G patch domain containing 8 
WNK2                  0.009   WNK lysine deficient protein kinase 2 
KIF4B                 0.007   kinesin family member 4B 
SETD2                 0.007   SET domain containing 2 
CENPF                 0.007   centromere protein F 
RAI14                 0.006   retinoic acid induced 14 isoform d 
RAI14                 0.006   retinoic acid induced 14 isoform c 
RAI14                 0.006   retinoic acid induced 14 isoform b 
RAI14                 0.006   retinoic acid induced 14 isoform a 
RAI14                 0.006   retinoic acid induced 14 isoform a 
RAI14                 0.006   retinoic acid induced 14 isoform a 
CALD1                 0.006   caldesmon 1 isoform 4 
CALD1                 0.006   caldesmon 1 isoform 3 
POLQ                  0.006   DNA polymerase theta 
GLTSCR1               0.006   glioma tumor suppressor candidate region gene 1 [Ho...
CCDC18                0.006   sarcoma antigen NY-SAR-41 
PRDM6                 0.006   PR domain containing 6 
SRCAP                 0.006   Snf2-related CBP activator protein 
RAI2                  0.006   retinoic acid induced 2 
DNAJC21               0.006   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.006   DnaJ homology subfamily A member 5 isoform 2 
FOXB2                 0.006   forkhead box B2 
FLJ22184              0.005   PREDICTED: hypothetical protein FLJ22184 
PPRC1                 0.005   peroxisome proliferator-activated receptor gamma, co...
CYLC1                 0.005   cylicin, basic protein of sperm head cytoskeleton 1...
HOOK1                 0.005   hook homolog 1 
RAPH1                 0.005   Ras association and pleckstrin homology domains 1 is...
ANKRD12               0.005   ankyrin repeat domain 12 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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