Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CREM Sequence: fasta or formatted (137aa) NCBI GI: 34335206
Description:

cAMP responsive element modulator isoform b

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [300aa] cAMP responsive element modulator isoform a
alt prot [120aa] cAMP responsive element modulator isoform d
alt prot [109aa] cAMP responsive element modulator isoform e
alt prot [121aa] cAMP responsive element modulator isoform f
alt prot [108aa] cAMP responsive element modulator isoform g
alt prot [112aa] cAMP responsive element modulator isoform h
alt prot [95aa] cAMP responsive element modulator isoform i
alt prot [102aa] cAMP responsive element modulator isoform j
alt prot [113aa] cAMP responsive element modulator isoform k
alt prot [96aa] cAMP responsive element modulator isoform l
alt prot [245aa] cAMP responsive element modulator isoform m
alt prot [182aa] cAMP responsive element modulator isoform n
alt prot [270aa] cAMP responsive element modulator isoform o
alt prot [207aa] cAMP responsive element modulator isoform p
alt prot [96aa] cAMP responsive element modulator isoform q
alt prot [95aa] cAMP responsive element modulator isoform r
alt prot [299aa] cAMP responsive element modulator isoform u
alt prot [236aa] cAMP responsive element modulator isoform t
alt prot [248aa] cAMP responsive element modulator isoform s
alt prot [221aa] cAMP responsive element modulator isoform v
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         13           2
 C cysteine            0.0          0           0
 D aspartate           3.6          5           1
 E glutamate          10.9         15           3
 F phenylalanine       0.0          0           0
 G glycine             4.4          6           1
 H histidine           2.2          3           1
 I isoleucine          7.3         10           1
 K lysine              2.9          4           1
 L leucine             6.6          9           2
 M methionine          2.9          4           1
 N asparagine          1.5          2           1
 P proline             5.1          7           2
 Q glutamine           5.1          7           1
 R arginine            5.1          7           2
 S serine             13.9         19           2
 T threonine           9.5         13           1
 V valine              5.8          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element modulator isoform b 
CREM                  0.874   cAMP responsive element modulator isoform v 
CREM                  0.874   cAMP responsive element modulator isoform s 
CREM                  0.874   cAMP responsive element modulator isoform t 
CREM                  0.874   cAMP responsive element modulator isoform a 
CREM                  0.874   cAMP responsive element modulator isoform u 
CREM                  0.559   cAMP responsive element modulator isoform p 
CREM                  0.555   cAMP responsive element modulator isoform o 
CREM                  0.555   cAMP responsive element modulator isoform n 
CREM                  0.555   cAMP responsive element modulator isoform m 
CREB1                 0.387   cAMP responsive element binding protein 1 isoform B ...
CREB1                 0.378   cAMP responsive element binding protein 1 isoform A [...
ATF1                  0.176   activating transcription factor 1 
PCDH15                0.029   protocadherin 15 isoform CD2-1 precursor 
C1orf144              0.029   putative MAPK activating protein PM20,PM21 isoform ...
SDCCAG10              0.025   serologically defined colon cancer antigen 10 
HECW1                 0.021   NEDD4-like ubiquitin-protein ligase 1 
MUM1L1                0.021   melanoma associated antigen (mutated) 1-like 1 [Homo...
DPCR1                 0.017   diffuse panbronchiolitis critical region 1 protein ...
LOC100294236          0.017   PREDICTED: similar to diffuse panbronchiolitis crit...
ZFHX2                 0.017   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.017   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.017   PREDICTED: zinc finger homeobox 2 
ATAD2                 0.013   ATPase family, AAA domain containing 2 
SYNE1                 0.013   spectrin repeat containing, nuclear envelope 1 isof...
SYNE1                 0.013   spectrin repeat containing, nuclear envelope 1 isof...
SYNE1                 0.013   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.013   spectrin repeat containing, nuclear envelope 1 isof...
IQSEC3                0.013   IQ motif and Sec7 domain 3 
CDH26                 0.013   cadherin-like 26 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press