Guide to the Human Genome
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Name: CREM Sequence: fasta or formatted (248aa) NCBI GI: 34335226
Description:

cAMP responsive element modulator isoform s

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [300aa] cAMP responsive element modulator isoform a
alt prot [120aa] cAMP responsive element modulator isoform d
alt prot [109aa] cAMP responsive element modulator isoform e
alt prot [121aa] cAMP responsive element modulator isoform f
alt prot [108aa] cAMP responsive element modulator isoform g
alt prot [112aa] cAMP responsive element modulator isoform h
alt prot [95aa] cAMP responsive element modulator isoform i
alt prot [102aa] cAMP responsive element modulator isoform j
alt prot [113aa] cAMP responsive element modulator isoform k
alt prot [96aa] cAMP responsive element modulator isoform l
alt prot [137aa] cAMP responsive element modulator isoform b
alt prot [245aa] cAMP responsive element modulator isoform m
alt prot [182aa] cAMP responsive element modulator isoform n
alt prot [270aa] cAMP responsive element modulator isoform o
alt prot [207aa] cAMP responsive element modulator isoform p
alt prot [96aa] cAMP responsive element modulator isoform q
alt prot [95aa] cAMP responsive element modulator isoform r
alt prot [299aa] cAMP responsive element modulator isoform u
alt prot [236aa] cAMP responsive element modulator isoform t
alt prot [221aa] cAMP responsive element modulator isoform v
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         26           3
 C cysteine            1.6          4           1
 D aspartate           2.4          6           1
 E glutamate          11.7         29           3
 F phenylalanine       0.0          0           0
 G glycine             3.6          9           1
 H histidine           2.4          6           1
 I isoleucine          4.8         12           1
 K lysine              7.3         18           3
 L leucine             6.9         17           1
 M methionine          3.2          8           1
 N asparagine          3.2          8           1
 P proline             5.6         14           2
 Q glutamine           5.2         13           2
 R arginine            6.9         17           2
 S serine              8.9         22           2
 T threonine           7.7         19           1
 V valine              5.2         13           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element modulator isoform s 
CREM                  0.926   cAMP responsive element modulator isoform t 
CREM                  0.815   cAMP responsive element modulator isoform u 
CREM                  0.793   cAMP responsive element modulator isoform v 
CREM                  0.754   cAMP responsive element modulator isoform a 
CREM                  0.630   cAMP responsive element modulator isoform p 
CREM                  0.630   cAMP responsive element modulator isoform n 
CREM                  0.557   cAMP responsive element modulator isoform o 
CREM                  0.554   cAMP responsive element modulator isoform m 
CREB1                 0.474   cAMP responsive element binding protein 1 isoform B ...
CREB1                 0.470   cAMP responsive element binding protein 1 isoform A [...
CREM                  0.452   cAMP responsive element modulator isoform b 
CREM                  0.428   cAMP responsive element modulator isoform d 
CREM                  0.387   cAMP responsive element modulator isoform j 
CREM                  0.385   cAMP responsive element modulator isoform h 
CREM                  0.380   cAMP responsive element modulator isoform g 
CREM                  0.367   cAMP responsive element modulator isoform f 
CREM                  0.359   cAMP responsive element modulator isoform i 
CREM                  0.359   cAMP responsive element modulator isoform r 
CREM                  0.324   cAMP responsive element modulator isoform k 
CREM                  0.320   cAMP responsive element modulator isoform e 
ATF1                  0.311   activating transcription factor 1 
CREM                  0.298   cAMP responsive element modulator isoform l 
CREM                  0.298   cAMP responsive element modulator isoform q 
CREB3L1               0.074   cAMP responsive element binding protein 3-like 1 [Ho...
CREB3L2               0.057   cAMP responsive element binding protein 3-like 2 [Ho...
ATF6B                 0.054   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.054   activating transcription factor 6 beta isoform a [Ho...
CREB3L4               0.054   cAMP responsive element binding protein 3-like 4 [Ho...
ATF6                  0.043   activating transcription factor 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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