Guide to the Human Genome
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Name: CREM Sequence: fasta or formatted (96aa) NCBI GI: 34335218
Description:

cAMP responsive element modulator isoform q

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [300aa] cAMP responsive element modulator isoform a
alt prot [120aa] cAMP responsive element modulator isoform d
alt prot [109aa] cAMP responsive element modulator isoform e
alt prot [121aa] cAMP responsive element modulator isoform f
alt prot [108aa] cAMP responsive element modulator isoform g
alt prot [112aa] cAMP responsive element modulator isoform h
alt prot [95aa] cAMP responsive element modulator isoform i
alt prot [102aa] cAMP responsive element modulator isoform j
alt prot [113aa] cAMP responsive element modulator isoform k
alt mRNA [96aa] cAMP responsive element modulator isoform l
alt prot [137aa] cAMP responsive element modulator isoform b
alt prot [245aa] cAMP responsive element modulator isoform m
alt prot [182aa] cAMP responsive element modulator isoform n
alt prot [270aa] cAMP responsive element modulator isoform o
alt prot [207aa] cAMP responsive element modulator isoform p
alt prot [95aa] cAMP responsive element modulator isoform r
alt prot [299aa] cAMP responsive element modulator isoform u
alt prot [236aa] cAMP responsive element modulator isoform t
alt prot [248aa] cAMP responsive element modulator isoform s
alt prot [221aa] cAMP responsive element modulator isoform v
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         10           2
 C cysteine            3.1          3           1
 D aspartate           2.1          2           1
 E glutamate          11.5         11           2
 F phenylalanine       0.0          0           0
 G glycine             2.1          2           1
 H histidine           1.0          1           1
 I isoleucine          3.1          3           1
 K lysine             10.4         10           2
 L leucine            10.4         10           1
 M methionine          3.1          3           1
 N asparagine          2.1          2           1
 P proline             6.2          6           1
 Q glutamine           5.2          5           2
 R arginine            9.4          9           3
 S serine              5.2          5           1
 T threonine           5.2          5           1
 V valine              6.2          6           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element modulator isoform q 
CREM                  1.000   cAMP responsive element modulator isoform l 
CREM                  1.000   cAMP responsive element modulator isoform k 
CREM                  1.000   cAMP responsive element modulator isoform f 
CREM                  1.000   cAMP responsive element modulator isoform e 
CREM                  1.000   cAMP responsive element modulator isoform a 
CREM                  1.000   cAMP responsive element modulator isoform v 
CREM                  1.000   cAMP responsive element modulator isoform p 
CREM                  1.000   cAMP responsive element modulator isoform o 
CREM                  1.000   cAMP responsive element modulator isoform n 
CREM                  1.000   cAMP responsive element modulator isoform m 
CREM                  0.825   cAMP responsive element modulator isoform j 
CREM                  0.825   cAMP responsive element modulator isoform i 
CREM                  0.825   cAMP responsive element modulator isoform h 
CREM                  0.825   cAMP responsive element modulator isoform g 
CREM                  0.825   cAMP responsive element modulator isoform d 
CREM                  0.825   cAMP responsive element modulator isoform r 
CREM                  0.825   cAMP responsive element modulator isoform s 
CREM                  0.825   cAMP responsive element modulator isoform t 
CREM                  0.825   cAMP responsive element modulator isoform u 
CREB1                 0.578   cAMP responsive element binding protein 1 isoform A [...
CREB1                 0.578   cAMP responsive element binding protein 1 isoform B ...
ATF1                  0.506   activating transcription factor 1 
CREB3L1               0.181   cAMP responsive element binding protein 3-like 1 [Ho...
CREB3L4               0.175   cAMP responsive element binding protein 3-like 4 [Ho...
ATF6B                 0.151   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.151   activating transcription factor 6 beta isoform a [Ho...
ATF6                  0.127   activating transcription factor 6 
CREB3L2               0.114   cAMP responsive element binding protein 3-like 2 [Ho...
CREB3                 0.114   cAMP responsive element binding protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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