Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CREM Sequence: fasta or formatted (95aa) NCBI GI: 34335220
Description:

cAMP responsive element modulator isoform r

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [300aa] cAMP responsive element modulator isoform a
alt prot [120aa] cAMP responsive element modulator isoform d
alt prot [109aa] cAMP responsive element modulator isoform e
alt prot [121aa] cAMP responsive element modulator isoform f
alt prot [108aa] cAMP responsive element modulator isoform g
alt prot [112aa] cAMP responsive element modulator isoform h
alt mRNA [95aa] cAMP responsive element modulator isoform i
alt prot [102aa] cAMP responsive element modulator isoform j
alt prot [113aa] cAMP responsive element modulator isoform k
alt prot [96aa] cAMP responsive element modulator isoform l
alt prot [137aa] cAMP responsive element modulator isoform b
alt prot [245aa] cAMP responsive element modulator isoform m
alt prot [182aa] cAMP responsive element modulator isoform n
alt prot [270aa] cAMP responsive element modulator isoform o
alt prot [207aa] cAMP responsive element modulator isoform p
alt prot [96aa] cAMP responsive element modulator isoform q
alt prot [299aa] cAMP responsive element modulator isoform u
alt prot [236aa] cAMP responsive element modulator isoform t
alt prot [248aa] cAMP responsive element modulator isoform s
alt prot [221aa] cAMP responsive element modulator isoform v
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         11           2
 C cysteine            3.2          3           1
 D aspartate           1.1          1           1
 E glutamate          11.6         11           2
 F phenylalanine       0.0          0           0
 G glycine             2.1          2           1
 H histidine           2.1          2           1
 I isoleucine          2.1          2           1
 K lysine             10.5         10           3
 L leucine            11.6         11           1
 M methionine          3.2          3           1
 N asparagine          4.2          4           1
 P proline             5.3          5           1
 Q glutamine           5.3          5           2
 R arginine            9.5          9           2
 S serine              3.2          3           1
 T threonine           4.2          4           1
 V valine              6.3          6           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element modulator isoform r 
CREM                  1.000   cAMP responsive element modulator isoform j 
CREM                  1.000   cAMP responsive element modulator isoform i 
CREM                  1.000   cAMP responsive element modulator isoform h 
CREM                  1.000   cAMP responsive element modulator isoform g 
CREM                  1.000   cAMP responsive element modulator isoform d 
CREM                  1.000   cAMP responsive element modulator isoform s 
CREM                  1.000   cAMP responsive element modulator isoform t 
CREM                  1.000   cAMP responsive element modulator isoform u 
CREM                  0.830   cAMP responsive element modulator isoform l 
CREM                  0.830   cAMP responsive element modulator isoform k 
CREM                  0.830   cAMP responsive element modulator isoform f 
CREM                  0.830   cAMP responsive element modulator isoform e 
CREM                  0.830   cAMP responsive element modulator isoform q 
CREM                  0.830   cAMP responsive element modulator isoform a 
CREM                  0.830   cAMP responsive element modulator isoform v 
CREM                  0.830   cAMP responsive element modulator isoform p 
CREM                  0.830   cAMP responsive element modulator isoform o 
CREM                  0.830   cAMP responsive element modulator isoform n 
CREM                  0.830   cAMP responsive element modulator isoform m 
CREB1                 0.715   cAMP responsive element binding protein 1 isoform A [...
CREB1                 0.715   cAMP responsive element binding protein 1 isoform B ...
ATF1                  0.588   activating transcription factor 1 
CREB3L1               0.200   cAMP responsive element binding protein 3-like 1 [Ho...
CREB3L2               0.158   cAMP responsive element binding protein 3-like 2 [Ho...
ATF6B                 0.152   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.152   activating transcription factor 6 beta isoform a [Ho...
CREB3L4               0.152   cAMP responsive element binding protein 3-like 4 [Ho...
CREB3L3               0.121   cAMP responsive element binding protein 3-like 3 [Ho...
ATF6                  0.115   activating transcription factor 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press