Guide to the Human Genome
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Name: CREM Sequence: fasta or formatted (102aa) NCBI GI: 34335200
Description:

cAMP responsive element modulator isoform j

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [300aa] cAMP responsive element modulator isoform a
alt prot [120aa] cAMP responsive element modulator isoform d
alt prot [109aa] cAMP responsive element modulator isoform e
alt prot [121aa] cAMP responsive element modulator isoform f
alt prot [108aa] cAMP responsive element modulator isoform g
alt prot [112aa] cAMP responsive element modulator isoform h
alt prot [95aa] cAMP responsive element modulator isoform i
alt prot [113aa] cAMP responsive element modulator isoform k
alt prot [96aa] cAMP responsive element modulator isoform l
alt prot [137aa] cAMP responsive element modulator isoform b
alt prot [245aa] cAMP responsive element modulator isoform m
alt prot [182aa] cAMP responsive element modulator isoform n
alt prot [270aa] cAMP responsive element modulator isoform o
alt prot [207aa] cAMP responsive element modulator isoform p
alt prot [96aa] cAMP responsive element modulator isoform q
alt prot [95aa] cAMP responsive element modulator isoform r
alt prot [299aa] cAMP responsive element modulator isoform u
alt prot [236aa] cAMP responsive element modulator isoform t
alt prot [248aa] cAMP responsive element modulator isoform s
alt prot [221aa] cAMP responsive element modulator isoform v
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         14           3
 C cysteine            2.9          3           1
 D aspartate           2.0          2           1
 E glutamate          10.8         11           2
 F phenylalanine       0.0          0           0
 G glycine             2.9          3           1
 H histidine           2.0          2           1
 I isoleucine          2.0          2           1
 K lysine              9.8         10           3
 L leucine            10.8         11           1
 M methionine          3.9          4           1
 N asparagine          3.9          4           1
 P proline             4.9          5           1
 Q glutamine           4.9          5           2
 R arginine            8.8          9           2
 S serine              2.9          3           1
 T threonine           4.9          5           1
 V valine              5.9          6           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element modulator isoform j 
CREM                  1.000   cAMP responsive element modulator isoform d 
CREM                  1.000   cAMP responsive element modulator isoform s 
CREM                  0.989   cAMP responsive element modulator isoform h 
CREM                  0.983   cAMP responsive element modulator isoform g 
CREM                  0.983   cAMP responsive element modulator isoform u 
CREM                  0.972   cAMP responsive element modulator isoform t 
CREM                  0.927   cAMP responsive element modulator isoform i 
CREM                  0.927   cAMP responsive element modulator isoform r 
CREM                  0.848   cAMP responsive element modulator isoform f 
CREM                  0.831   cAMP responsive element modulator isoform k 
CREM                  0.826   cAMP responsive element modulator isoform e 
CREM                  0.826   cAMP responsive element modulator isoform a 
CREM                  0.826   cAMP responsive element modulator isoform o 
CREM                  0.826   cAMP responsive element modulator isoform m 
CREM                  0.820   cAMP responsive element modulator isoform v 
CREM                  0.820   cAMP responsive element modulator isoform p 
CREM                  0.820   cAMP responsive element modulator isoform n 
CREM                  0.770   cAMP responsive element modulator isoform l 
CREM                  0.770   cAMP responsive element modulator isoform q 
CREB1                 0.708   cAMP responsive element binding protein 1 isoform A [...
CREB1                 0.708   cAMP responsive element binding protein 1 isoform B ...
ATF1                  0.579   activating transcription factor 1 
CREB3L1               0.185   cAMP responsive element binding protein 3-like 1 [Ho...
CREB3L2               0.146   cAMP responsive element binding protein 3-like 2 [Ho...
ATF6B                 0.140   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.140   activating transcription factor 6 beta isoform a [Ho...
CREB3L4               0.140   cAMP responsive element binding protein 3-like 4 [Ho...
CREB3L3               0.112   cAMP responsive element binding protein 3-like 3 [Ho...
ATF6                  0.107   activating transcription factor 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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