Guide to the Human Genome
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Name: CREB1 Sequence: fasta or formatted (327aa) NCBI GI: 4758054
Description:

cAMP responsive element binding protein 1 isoform A

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [341aa] cAMP responsive element binding protein 1 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         37           3
 C cysteine            0.9          3           1
 D aspartate           3.4         11           1
 E glutamate           7.3         24           3
 F phenylalanine       0.0          0           0
 G glycine             4.6         15           2
 H histidine           0.9          3           1
 I isoleucine          5.5         18           1
 K lysine              4.0         13           3
 L leucine             5.8         19           1
 M methionine          2.1          7           1
 N asparagine          3.7         12           2
 P proline             5.8         19           1
 Q glutamine          11.0         36           2
 R arginine            4.6         15           2
 S serine              8.3         27           2
 T threonine          10.1         33           2
 V valine              8.6         28           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP responsive element binding protein 1 isoform A [... 
CREB1                 0.983   cAMP responsive element binding protein 1 isoform B ...
CREM                  0.517   cAMP responsive element modulator isoform u 
CREM                  0.480   cAMP responsive element modulator isoform a 
ATF1                  0.478   activating transcription factor 1 
CREM                  0.477   cAMP responsive element modulator isoform o 
CREM                  0.477   cAMP responsive element modulator isoform m 
CREM                  0.359   cAMP responsive element modulator isoform s 
CREM                  0.329   cAMP responsive element modulator isoform t 
CREM                  0.292   cAMP responsive element modulator isoform v 
CREM                  0.289   cAMP responsive element modulator isoform p 
CREM                  0.289   cAMP responsive element modulator isoform n 
CREM                  0.216   cAMP responsive element modulator isoform d 
CREM                  0.211   cAMP responsive element modulator isoform h 
CREM                  0.209   cAMP responsive element modulator isoform j 
CREM                  0.209   cAMP responsive element modulator isoform g 
CREM                  0.196   cAMP responsive element modulator isoform i 
CREM                  0.196   cAMP responsive element modulator isoform r 
CREM                  0.178   cAMP responsive element modulator isoform f 
CREM                  0.173   cAMP responsive element modulator isoform k 
CREM                  0.173   cAMP responsive element modulator isoform e 
CREM                  0.159   cAMP responsive element modulator isoform l 
CREM                  0.159   cAMP responsive element modulator isoform q 
CREM                  0.150   cAMP responsive element modulator isoform b 
ATF6B                 0.065   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.065   activating transcription factor 6 beta isoform a [Ho...
CREB3L1               0.061   cAMP responsive element binding protein 3-like 1 [Ho...
CREB3L2               0.047   cAMP responsive element binding protein 3-like 2 [Ho...
CREB3L4               0.042   cAMP responsive element binding protein 3-like 4 [Ho...
ATF2                  0.040   activating transcription factor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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