Search of human proteins with 34098946

Search of human proteins with 34098946

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34098946 nuclease sensitive element binding protein 1 [Homo
sapiens]
         (324 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34098946 nuclease sensitive element binding protein 1 [Homo s...   677   0.0  
gi|224586882 cold shock domain protein A isoform a [Homo sapiens]     313   1e-85
gi|224586884 cold shock domain protein A isoform b [Homo sapiens]     243   2e-64
gi|156415990 Y box binding protein 2 [Homo sapiens]                   233   1e-61
gi|51972214 lin-28 homolog B [Homo sapiens]                            69   6e-12
gi|13375938 lin-28 homolog [Homo sapiens]                              63   3e-10
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    50   2e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    48   1e-05
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]    47   2e-05
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]      47   2e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    46   5e-05
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]    45   7e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         45   9e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     45   1e-04
gi|48255931 hepatoma-derived growth factor-related protein 2 iso...    44   2e-04
gi|14249158 hepatoma-derived growth factor-related protein 2 iso...    44   2e-04
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|146134388 YLP motif containing 1 [Homo sapiens]                     42   6e-04
gi|167234419 thyroid hormone receptor associated protein 3 [Homo...    42   7e-04
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     42   0.001
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     42   0.001
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]         40   0.003
gi|118421089 chromodomain helicase DNA binding protein 2 isoform...    40   0.004
gi|110611184 chromodomain helicase DNA binding protein 2 isoform...    40   0.004
gi|14149807 coiled-coil domain containing 55 isoform 1 [Homo sap...    39   0.005
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre...    39   0.005
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        39   0.006
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    39   0.006
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    39   0.006
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    39   0.006

>gi|34098946 nuclease sensitive element binding protein 1 [Homo
           sapiens]
          Length = 324

 Score =  677 bits (1747), Expect = 0.0
 Identities = 324/324 (100%), Positives = 324/324 (100%)

Query: 1   MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL 60
           MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL
Sbjct: 1   MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL 60

Query: 61  GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 120
           GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
Sbjct: 61  GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 120

Query: 121 EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG 180
           EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
Sbjct: 121 EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG 180

Query: 181 QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG 240
           QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
Sbjct: 181 QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG 240

Query: 241 YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG 300
           YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG
Sbjct: 241 YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG 300

Query: 301 KETKAADPPAENSSAPEAEQGGAE 324
           KETKAADPPAENSSAPEAEQGGAE
Sbjct: 301 KETKAADPPAENSSAPEAEQGGAE 324


>gi|224586882 cold shock domain protein A isoform a [Homo sapiens]
          Length = 372

 Score =  313 bits (802), Expect = 1e-85
 Identities = 192/338 (56%), Positives = 217/338 (64%), Gaps = 29/338 (8%)

Query: 10  PPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGD---KKVIATKVLGTVKWF 66
           P AA PA  A  A +  PG   + A +G     + A  AG +   KKV+ATKVLGTVKWF
Sbjct: 41  PQAAAPAPAAHVAGN--PGGDAAPAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWF 98

Query: 67  NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 126
           NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT
Sbjct: 99  NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 158

Query: 127 GPGGVPVQGSKYAADRNHYRR--YPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQ--- 181
           GP GVPV+GS+YAADR  YRR  Y RRRGPPRNY    +   SG        A + Q   
Sbjct: 159 GPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSG 218

Query: 182 --AQQRRP-----YRRRRFPPYYMRRPYGRRPQ---YSNPPVQGEVMEGADN--QGAGEQ 229
              Q RRP     YR+RRFPPY++ + + RR +   + N    GE+ E  D   +GA  Q
Sbjct: 219 ARNQLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQ 278

Query: 230 GRPVRQNMYRGYRPRFR-RGPPRQRQPREDGNEEDKENQGDETQGQQPPQRR-YRRNFNY 287
           G PV +N    YRPR+R RGPPR R     G  EDKENQ   +   QP  RR YRR +NY
Sbjct: 279 G-PVHRN--PTYRPRYRSRGPPRPRPAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNY 335

Query: 288 RRR-RPENPKPQDGKETKAADPPAENSSAPEAEQGGAE 324
           RRR RP N   QDGKE KA + P EN  AP  +Q  AE
Sbjct: 336 RRRPRPPNAPSQDGKEAKAGEAPTEN-PAPPTQQSSAE 372


>gi|224586884 cold shock domain protein A isoform b [Homo sapiens]
          Length = 303

 Score =  243 bits (619), Expect = 2e-64
 Identities = 162/321 (50%), Positives = 182/321 (56%), Gaps = 64/321 (19%)

Query: 10  PPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGD---KKVIATKVLGTVKWF 66
           P AA PA  A  A +  PG   + A +G     + A  AG +   KKV+ATKVLGTVKWF
Sbjct: 41  PQAAAPAPAAHVAGN--PGGDAAPAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWF 98

Query: 67  NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 126
           NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT
Sbjct: 99  NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT 158

Query: 127 GPGGVPVQGSKYAADRNHYRR--YPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQ 184
           GP GVPV+GS+YAADR  YRR  Y RRRGPPRN         +GE  E  +  PEG AQ 
Sbjct: 159 GPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRN---------AGEIGEMKDGVPEG-AQL 208

Query: 185 RRPYRRRRFPPYYMRRPYGRRPQYSNP-PVQGEVMEGADNQGAGEQGRPVRQNMYRGYRP 243
           + P  R    P Y  R   R P    P P  GE  E  +NQ A     P + ++ RGYR 
Sbjct: 209 QGPVHRN---PTYRPRYRSRGPPRPRPAPAVGEA-EDKENQQA--TSGPNQPSVRRGYRR 262

Query: 244 RFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKET 303
            +      +R+PR                   PP                N   QDGKE 
Sbjct: 263 PYN----YRRRPR-------------------PP----------------NAPSQDGKEA 283

Query: 304 KAADPPAENSSAPEAEQGGAE 324
           KA + P EN  AP  +Q  AE
Sbjct: 284 KAGEAPTEN-PAPPTQQSSAE 303


>gi|156415990 Y box binding protein 2 [Homo sapiens]
          Length = 364

 Score =  233 bits (595), Expect = 1e-61
 Identities = 156/355 (43%), Positives = 193/355 (54%), Gaps = 58/355 (16%)

Query: 7   TQQPPAAPPAAPALSAADTKPGTTGS---GAGSGGPGGLTSAAPAG-------------- 49
           T  P A  PA  A   A   P   G    G G+GG GG  S   AG              
Sbjct: 11  TAVPAATVPATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPA 70

Query: 50  --------------GDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNN 95
                          DK V+A +VLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIK+NN
Sbjct: 71  TAVSGTPAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNN 130

Query: 96  PRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRY---PRRR 152
           PRK+LRSVGDGETVEFDVVEGEKGAEA NVTGPGGVPV+GS+YA +R   RR+   P   
Sbjct: 131 PRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRRFIPRPPSV 190

Query: 153 GPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPP 212
            PP    +   ++ +G  ++G  +   GQ    RP RR   PP++ RR + R P+   PP
Sbjct: 191 APPPMVAE-IPSAGTGPGSKGERAEDSGQ----RP-RRWCPPPFFYRRRFVRGPR---PP 241

Query: 213 VQGEVMEGADNQGAGEQGRPVRQNMYRG--------YRPRFR---RGPPRQRQPREDGNE 261
            Q + +EG D     E   P+  +  +G        +RPR+R   R  PRQ+   E G+ 
Sbjct: 242 NQQQPIEGTDRVEPKETA-PLEGHQQQGDERVPPPRFRPRYRRPFRPRPRQQPTTEGGDG 300

Query: 262 EDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAP 316
           E K +QG    G +P  +R R    ++RRR + P PQ     +   P A  +SAP
Sbjct: 301 ETKPSQG-PADGSRPEPQRPRNRPYFQRRRQQAPGPQQAPGPR--QPAAPETSAP 352


>gi|51972214 lin-28 homolog B [Homo sapiens]
          Length = 250

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 18/115 (15%)

Query: 33  GAGSGG---PGGLTSAAPAGGDKKVIATKVLGTVKWFNVRNGYGFI---NRN----DTKE 82
           GA  GG   PG L    PA  + +V+  +  G  KWFNVR G+GFI   NR     D   
Sbjct: 5   GASKGGGEEPGKLPE--PAEEESQVL--RGTGHCKWFNVRMGFGFISMINREGSPLDIPV 60

Query: 83  DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 137
           DVFVHQ+ +         RS+ +GE VEF   +  KG E+  VTGPGG P  GS+
Sbjct: 61  DVFVHQSKLFMEG----FRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSE 111


>gi|13375938 lin-28 homolog [Homo sapiens]
          Length = 209

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 11/84 (13%)

Query: 61  GTVKWFNVRNGYGFINRN-------DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
           G  KWFNVR G+GF++         D   DVFVHQ+ +         RS+ +GE VEF  
Sbjct: 42  GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEG----FRSLKEGEAVEFTF 97

Query: 114 VEGEKGAEAANVTGPGGVPVQGSK 137
            +  KG E+  VTGPGGV   GS+
Sbjct: 98  KKSAKGLESIRVTGPGGVFCIGSE 121


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 57/199 (28%), Positives = 71/199 (35%), Gaps = 27/199 (13%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG       N  +  P R G P        N   G      +  PEGQ  Q   
Sbjct: 57  PEGRPPQGG------NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK--PEGQPPQGG- 107

Query: 188 YRRRRFPPYYMRRPYGRRPQYSN----PPVQGEVMEGADNQGAGE-QGRPVRQNMYRGYR 242
             + + PP    +P G  PQ  N    PP +    EG   QG  + QG P R     G  
Sbjct: 108 -NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 166

Query: 243 PRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKE 302
           P+   G   Q  P   G  E    QG   Q Q PP R           +PE P PQ G +
Sbjct: 167 PQ--GGNQSQGPPPHPGKPEGPPPQGGN-QSQGPPPRP---------GKPEGPPPQGGNQ 214

Query: 303 TKAADPPAENSSAPEAEQG 321
           ++   P       P ++ G
Sbjct: 215 SQGPPPRPGKPEGPPSQGG 233



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 61/211 (28%), Positives = 76/211 (36%), Gaps = 28/211 (13%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG       N  +  P R G P        N   G      +  PEG   Q   
Sbjct: 99  PEGQPPQGG------NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK--PEGPPPQGG- 149

Query: 188 YRRRRFPPYYMRRPYGRRPQYSN----PPVQGEVMEGADNQGAGE-QGRPVRQNMYRGYR 242
             + + PP    +P G  PQ  N    PP      EG   QG  + QG P R     G  
Sbjct: 150 -NQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 208

Query: 243 PRFRRGPPRQRQPREDGNEEDKENQG-DETQGQQP----PQRRYRRNFNYRRR-----RP 292
           P+   G   Q  P   G  E   +QG ++ QG  P    PQ    +  N  +R     RP
Sbjct: 209 PQ--GGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRP 266

Query: 293 ENPKPQDGKETKAADPPA-ENSSAPEAEQGG 322
           + P P  G   +   PPA +    P   QGG
Sbjct: 267 QGPPPPGGNPQQPLPPPAGKPQGPPPPPQGG 297



 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 54/201 (26%), Positives = 72/201 (35%), Gaps = 31/201 (15%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG       N  +  P R G P       Q  + G +++G    P G+ +   P
Sbjct: 78  PEGPPPQGG------NQSQGPPPRPGKPEG-----QPPQGGNQSQGPPPRP-GKPEGPPP 125

Query: 188 Y--RRRRFPPYYMRRPYGRRPQYSN----PPVQGEVMEGADNQGAGE-QGRPVRQNMYRG 240
               + + PP    +P G  PQ  N    PP +    EG   QG  + QG P       G
Sbjct: 126 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEG 185

Query: 241 YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG 300
             P+   G   Q  P   G  E    QG   Q Q PP R           +PE P  Q G
Sbjct: 186 PPPQ--GGNQSQGPPPRPGKPEGPPPQGGN-QSQGPPPRP---------GKPEGPPSQGG 233

Query: 301 KETKAADPPAENSSAPEAEQG 321
            + +   P       P  ++G
Sbjct: 234 NKPQGPPPHPGKPQGPPPQEG 254



 Score = 35.0 bits (79), Expect = 0.090
 Identities = 37/134 (27%), Positives = 48/134 (35%), Gaps = 40/134 (29%)

Query: 194 PPYYMRRPYGRRPQYSN-----PPVQGEVMEGADNQGAGE-QGRPVRQNMYRGYRPRFRR 247
           P     +P GRRPQ  N     PP  G+  EG   QG  + QG P R        P    
Sbjct: 29  PSVISGKPEGRRPQGGNQPQRTPPPPGKP-EGRPPQGGNQSQGPPPR--------PGKPE 79

Query: 248 GPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAAD 307
           GPP Q               G+++QG  P           R  +PE   PQ G +++   
Sbjct: 80  GPPPQG--------------GNQSQGPPP-----------RPGKPEGQPPQGGNQSQGPP 114

Query: 308 PPAENSSAPEAEQG 321
           P       P  + G
Sbjct: 115 PRPGKPEGPPPQGG 128



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 13/95 (13%)

Query: 228 EQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNY 287
           E+   V      G RP+    P  QR P   G  E +  QG   Q Q PP R        
Sbjct: 26  EESPSVISGKPEGRRPQGGNQP--QRTPPPPGKPEGRPPQGGN-QSQGPPPRP------- 75

Query: 288 RRRRPENPKPQDGKETKAADPPAENSSAPEAEQGG 322
              +PE P PQ G +++   PP       +  QGG
Sbjct: 76  --GKPEGPPPQGGNQSQ-GPPPRPGKPEGQPPQGG 107


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 57/211 (27%), Positives = 74/211 (35%), Gaps = 24/211 (11%)

Query: 115 EGEKGAEAANVTG-PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEG 173
           +G+K     +  G P G P QG       N  +  P   G P+       N   G    G
Sbjct: 83  QGDKSRSPRSPPGKPQGPPPQGG------NQPQGPPPPPGKPQGPPPQGGNRPQGPPPPG 136

Query: 174 SESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPV 233
               P+G   Q    R  R PP    +P G  PQ  N P QG        QG   QG   
Sbjct: 137 K---PQGPPPQGDKSRSPRSPP---GKPQGPPPQGGNQP-QGPPPPPGKPQGPPPQGGKK 189

Query: 234 RQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPE 293
            Q      +P+   GPP Q            + QG   QG   PQ            +P+
Sbjct: 190 PQGPPPPGKPQ---GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPP-----GKPQ 241

Query: 294 NPKPQDGKETKAADPPAENSSAPEAEQGGAE 324
            P PQ G + +   PP +    P   QGG++
Sbjct: 242 GPPPQGGNKPQGPPPPGKPQGPP--AQGGSK 270



 Score = 35.4 bits (80), Expect = 0.069
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 230 GRPVRQNMYRGYRPRFRRGPPRQRQ--PREDGNEEDKENQGDETQGQQPPQRRYRRNFNY 287
           G P   +   G +P+    PP + Q  P + GN+        + QG  PPQ    R+   
Sbjct: 34  GNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDKSRSPRS 92

Query: 288 RRRRPENPKPQDGKETKAADPPAENSSAPEAEQG 321
              +P+ P PQ G + +   PP      P  + G
Sbjct: 93  PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 126


>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 49/155 (31%)

Query: 151 RRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSN 210
           R+GPP   QQ+  ++  G +N+G +  P  Q  Q     +++ PP    +P G   Q  +
Sbjct: 46  RQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQ-----QQQGPPPPQGKPQGPPQQGGH 100

Query: 211 PPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQ----RQPREDGNEEDKEN 266
           PP                QGRP              +GPP+Q    R PR  G  +    
Sbjct: 101 PP--------------PPQGRP--------------QGPPQQGGHPRPPR--GRPQGPPQ 130

Query: 267 QGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGK 301
           QG   QG  PP             +P+ P PQ G+
Sbjct: 131 QGGHQQGPPPPP----------PGKPQGPPPQGGR 155



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 263 DKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGG 322
           D+E QG    GQQ        N N     P+   PQ G + +   PP +       +QGG
Sbjct: 43  DEERQGPPLGGQQSQPSAGDGNQN---DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGG 99


>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 49/155 (31%)

Query: 151 RRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSN 210
           R+GPP   QQ+  ++  G +N+G +  P  Q  Q     +++ PP    +P G   Q  +
Sbjct: 46  RQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQ-----QQQGPPPPQGKPQGPPQQGGH 100

Query: 211 PPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQ----RQPREDGNEEDKEN 266
           PP                QGRP              +GPP+Q    R PR  G  +    
Sbjct: 101 PP--------------PPQGRP--------------QGPPQQGGHPRPPR--GRPQGPPQ 130

Query: 267 QGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGK 301
           QG   QG  PP             +P+ P PQ G+
Sbjct: 131 QGGHQQGPPPPP----------PGKPQGPPPQGGR 155



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 263 DKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGG 322
           D+E QG    GQQ        N N     P+   PQ G + +   PP +       +QGG
Sbjct: 43  DEERQGPPLGGQQSQPSAGDGNQN---DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGG 99


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 11/172 (6%)

Query: 149 PRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPY--RRRRFPPYYMRRPYGRRP 206
           P+R  PP    Q     + G +++G    P G+ + R P    + + PP     P+  +P
Sbjct: 47  PQRPPPPPGKPQG-PPPQGGNQSQGPPPPP-GKPEGRPPQGGNQSQGPP-----PHPGKP 99

Query: 207 QYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKEN 266
           +   PP QG           G+  RP  Q   + +RP    G P +  P+     +    
Sbjct: 100 E--RPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPP 157

Query: 267 QGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEA 318
              + +G  P +    R+      +P+ P  Q+G + +   PP +    P A
Sbjct: 158 HPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPA 209



 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 37/128 (28%), Positives = 47/128 (36%), Gaps = 19/128 (14%)

Query: 200 RPYGRRPQYSN-----PPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQ 254
           +P GRRPQ  N     PP  G+        G   QG P       G  P+   G   Q  
Sbjct: 35  KPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQ--GGNQSQGP 92

Query: 255 PREDGNEEDKENQG-DETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENS 313
           P   G  E    QG +++QG  PP             +PE P PQ G ++    PP    
Sbjct: 93  PPHPGKPERPPPQGGNQSQGTPPPP-----------GKPERPPPQGGNQSHRPPPPPGKP 141

Query: 314 SAPEAEQG 321
             P  + G
Sbjct: 142 ERPPPQGG 149



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 51/198 (25%), Positives = 70/198 (35%), Gaps = 44/198 (22%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG   +     +   P R  PP+   Q+        K E     P+G  Q  RP
Sbjct: 78  PEGRPPQGGNQSQGPPPHPGKPERP-PPQGGNQSQGTPPPPGKPE--RPPPQGGNQSHRP 134

Query: 188 YRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRR 247
                 PP    RP         PP  G   +G        +G P ++    G + R  R
Sbjct: 135 PP----PPGKPERP---------PPQGGNQSQGPPPHPGKPEGPPPQE----GNKSRSAR 177

Query: 248 GPPRQRQ--PREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKA 305
            PP + Q  P+++GN+          QG  PP +            P+ P P  G   + 
Sbjct: 178 SPPGKPQGPPQQEGNKP---------QGPPPPGK------------PQGPPPAGGNPQQP 216

Query: 306 ADPPA-ENSSAPEAEQGG 322
             PPA +    P   QGG
Sbjct: 217 QAPPAGKPQGPPPPPQGG 234


>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
          Length = 166

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 49/155 (31%)

Query: 151 RRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSN 210
           R+GPP   QQ+  ++  G +++G +  P  Q  Q     +++ PP    +P G   Q  +
Sbjct: 46  RQGPPLGGQQSQPSAGDGNQDDGPQQGPPQQGGQ-----QQQGPPPPQGKPQGPPQQGGH 100

Query: 211 PPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQ----RQPREDGNEEDKEN 266
           PP                QGRP              +GPP+Q    R PR  G  +    
Sbjct: 101 PP--------------PPQGRP--------------QGPPQQGGHPRPPR--GRPQGPPQ 130

Query: 267 QGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGK 301
           QG   QG  PP             +P+ P PQ G+
Sbjct: 131 QGGHQQGPPPPP----------PGKPQGPPPQGGR 155


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 32/202 (15%)

Query: 121 EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGP-PRNYQQNYQNSESGEKNEGSESAPE 179
           + +N T    V V   + +     ++   +R  P P    +  + SES E+++G + A  
Sbjct: 418 QQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSES-EEDKGGKMAAA 476

Query: 180 GQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYR 239
              QQRR YRR+               Q S+          + +  + E  RP R ++  
Sbjct: 477 DSVQQRRQYRRQN--------------QQSS--------SDSGSSSSSEDERPKRSHVKN 514

Query: 240 GYRPRFRR-GPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFN----YRRRRPEN 294
           G   R RR  P R   P     +++   +G   +   PP  R RR+ +     RRRR   
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPT 574

Query: 295 PKPQDGKETKAADPPAENSSAP 316
           P P   +    + PP   S +P
Sbjct: 575 PPP---RRRTPSPPPRRRSPSP 593



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 60/247 (24%), Positives = 83/247 (33%), Gaps = 34/247 (13%)

Query: 89  TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQ-----------GSK 137
           T  + N  RK   SV  G T     V   KG E      P   P +           G  
Sbjct: 416 TPQQSNRTRKSRVSVSPGRTS--GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKM 473

Query: 138 YAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPE-GQAQQRRPYRRRRFPPY 196
            AAD    RR  RR       Q    +S+SG  +   +  P+    +     RRRR  P 
Sbjct: 474 AAADSVQQRRQYRR-------QNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526

Query: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGP---PRQR 253
               P  R+ Q    P       G   +         R++      PR RR P   PR+R
Sbjct: 527 RSASPSPRKRQKETSP------RGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRR 580

Query: 254 QPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENS 313
            P    +   +       +   P QRRY  +   +RR    P P   + + +  P    S
Sbjct: 581 TP----SPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVS 636

Query: 314 SAPEAEQ 320
            +P  +Q
Sbjct: 637 HSPPPKQ 643



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 41/180 (22%), Positives = 59/180 (32%), Gaps = 12/180 (6%)

Query: 142 RNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRP 201
           R+  R   R R P     +    S S   +     +P     +RRP  RRR PP   R P
Sbjct: 281 RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSP-----RRRPSPRRRTPP--RRMP 333

Query: 202 YGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNE 261
              R + S  PV+      A   G+       R        P+    PPR+ +       
Sbjct: 334 PPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSAS 393

Query: 262 EDKENQGDETQGQQPPQRRY-----RRNFNYRRRRPENPKPQDGKETKAADPPAENSSAP 316
             +           PP+ R+     + N   + R   +P    GK TK        S +P
Sbjct: 394 PPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP 453



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 43/204 (21%), Positives = 73/204 (35%), Gaps = 33/204 (16%)

Query: 146 RRYPRRRGPPRNY-------------QQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRR 192
           R  PRRR PPR               ++  ++S S   +  S S+   ++  ++P +R  
Sbjct: 320 RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTS 379

Query: 193 FPPYYMRR------PYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYR---- 242
            PP   RR      P  RR + S P         +       + R  R ++  G      
Sbjct: 380 SPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKV 439

Query: 243 -----PRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKP 297
                   R  P    +PR+    E +E++G +       Q+R +    YRR+  ++   
Sbjct: 440 TKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQ----YRRQNQQS-SS 494

Query: 298 QDGKETKAADPPAENSSAPEAEQG 321
             G  + + D   + S     E G
Sbjct: 495 DSGSSSSSEDERPKRSHVKNGEVG 518



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 251 RQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPA 310
           +Q + ++  ++E+KE+  ++ +  + P+RR  R+ + RRR   +P  ++ K + +  P  
Sbjct: 146 KQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRR--SSPVRRERKRSHSRSPRH 203

Query: 311 ENSS-----APEAEQ 320
              S     APE ++
Sbjct: 204 RTKSRSPSPAPEKKE 218


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 51/209 (24%), Positives = 76/209 (36%), Gaps = 29/209 (13%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG              + +GPP   +      +   K+  S S P G+ Q   P
Sbjct: 139 PQGPPPQGGN------------KPQGPPPPGKPQGPPPQGDNKSRSSRSPP-GKPQGPPP 185

Query: 188 Y--RRRRFPPYYMRRPYGRRPQYSNPPV--------QGEVMEGADNQGAGEQ---GRPVR 234
               + + PP    +P G  PQ  N P         QG   +G DN+    +   G+P  
Sbjct: 186 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG-DNKSQSARSPPGKPQG 244

Query: 235 QNMYRGYRPRFRRGPPRQRQ--PREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRP 292
                G +P+    PP + Q  P + GN+        + QG  P      R+      +P
Sbjct: 245 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKP 304

Query: 293 ENPKPQDGKETKAADPPAENSSAPEAEQG 321
           + P PQ G + +   PP      P  + G
Sbjct: 305 QGPPPQGGNQPQGPPPPPGKPQGPPPQGG 333



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 22/173 (12%)

Query: 166 ESGEKNEGSESAPEGQAQQRRPY--RRRRFPPYYMRRPYGRRPQYSN------------- 210
           + G K +G  S P G+ Q   P    + + PP    +P G  PQ  N             
Sbjct: 42  QGGNKPQGPPSPP-GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 100

Query: 211 PPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQ--PREDGNEEDKENQG 268
           PP QG+      +     QG P +     G +P+    PP + Q  P + GN+       
Sbjct: 101 PPPQGDKSRSPRSPPGKPQGPPPQG----GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 156

Query: 269 DETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQG 321
            + QG  P      R+      +P+ P PQ G + +   PP      P  + G
Sbjct: 157 GKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 209



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 30/211 (14%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG              + +GPP   +      +   K++ + S P G+ Q   P
Sbjct: 201 PQGPPPQGGN------------KPQGPPPPGKPQGPPPQGDNKSQSARSPP-GKPQGPPP 247

Query: 188 Y--RRRRFPPYYMRRPYGRRPQYSN----PPVQGEVMEGADNQGAGEQ-------GRPVR 234
               + + PP    +P G  PQ  N    PP  G+  +G   QG  +        G+P  
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP-QGPPPQGGSKSRSSRSPPGKPQG 306

Query: 235 QNMYRGYRPRFRRGPPRQRQ--PREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRP 292
                G +P+    PP + Q  P + GN+        + QG  P      R+      +P
Sbjct: 307 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKP 366

Query: 293 ENPKPQDGKETKAADPPA-ENSSAPEAEQGG 322
           + P  Q+G   +   PPA  N   P+A   G
Sbjct: 367 QGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 397



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 39/167 (23%), Positives = 55/167 (32%), Gaps = 29/167 (17%)

Query: 128 PGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRP 187
           P G P QG              + +GPP   +      + G K+  S S P G+ Q   P
Sbjct: 263 PQGPPPQGGN------------KPQGPPPPGKPQGPPPQGGSKSRSSRSPP-GKPQGPPP 309

Query: 188 Y--RRRRFPPYYMRRPYGRRPQYSN--------------PPVQGEVMEGADNQGAGEQGR 231
               + + PP    +P G  PQ  N              PP  G     A +     QG 
Sbjct: 310 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGP 369

Query: 232 PVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQ 278
           P ++       P    G P+Q Q    G  +         +  +PPQ
Sbjct: 370 PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 416


>gi|48255931 hepatoma-derived growth factor-related protein 2
           isoform 1 [Homo sapiens]
          Length = 671

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 1/155 (0%)

Query: 165 SESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQ 224
           + S   +  S S+ +     ++P R R+     + +P GR+P+   PP        +D  
Sbjct: 251 ARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEV 310

Query: 225 GAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRN 284
               + +   +   R    R RR    + +   +  +E+KE +  E   +   +R    +
Sbjct: 311 DRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERR-RERADRGEAERGSGGS 369

Query: 285 FNYRRRRPENPKPQDGKETKAADPPAENSSAPEAE 319
                R  + P  + G++ +   PP+ + S PEAE
Sbjct: 370 SGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAE 404



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 38/190 (20%)

Query: 159 QQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM 218
           ++N ++S   EK    +  PE +A  R P           R P G R +    P   +  
Sbjct: 187 EENSESSSESEKTSDQDFTPEKKAAVRAP----------RRGPLGGRKK-KKAPSASDSD 235

Query: 219 EGADNQGAGEQGRPVRQNMY-------------------RGYRPRFRRGP-PRQRQPRED 258
             AD+ GA  +   + ++                     RG +P  +  P PR R+P+ +
Sbjct: 236 SKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE 295

Query: 259 --GNEEDKENQGDETQGQQPPQRR---YRRNFNYRRRRPENPKPQDGKETKAADPP--AE 311
              +    ++  DE       +RR    RR    RRRR +  + +  +E +  +     E
Sbjct: 296 RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRE 355

Query: 312 NSSAPEAEQG 321
            +   EAE+G
Sbjct: 356 RADRGEAERG 365


>gi|14249158 hepatoma-derived growth factor-related protein 2
           isoform 2 [Homo sapiens]
          Length = 670

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 1/155 (0%)

Query: 165 SESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQ 224
           + S   +  S S+ +     ++P R R+     + +P GR+P+   PP        +D  
Sbjct: 251 ARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEV 310

Query: 225 GAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRN 284
               + +   +   R    R RR    + +   +  +E+KE +  E   +   +R    +
Sbjct: 311 DRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERR-RERADRGEAERGSGGS 369

Query: 285 FNYRRRRPENPKPQDGKETKAADPPAENSSAPEAE 319
                R  + P  + G++ +   PP+ + S PEAE
Sbjct: 370 SGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAE 404



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 38/190 (20%)

Query: 159 QQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM 218
           ++N ++S   EK    +  PE +A  R P           R P G R +    P   +  
Sbjct: 187 EENSESSSESEKTSDQDFTPEKKAAVRAP----------RRGPLGGRKK-KKAPSASDSD 235

Query: 219 EGADNQGAGEQGRPVRQNMY-------------------RGYRPRFRRGP-PRQRQPRED 258
             AD+ GA  +   + ++                     RG +P  +  P PR R+P+ +
Sbjct: 236 SKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE 295

Query: 259 --GNEEDKENQGDETQGQQPPQRR---YRRNFNYRRRRPENPKPQDGKETKAADPP--AE 311
              +    ++  DE       +RR    RR    RRRR +  + +  +E +  +     E
Sbjct: 296 RPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRE 355

Query: 312 NSSAPEAEQG 321
            +   EAE+G
Sbjct: 356 RADRGEAERG 365


>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 275

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 33/171 (19%), Positives = 73/171 (42%), Gaps = 5/171 (2%)

Query: 142 RNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRP 201
           R   R   R+R   +  ++  +  E G++ E      E Q ++RR   RR+      +R 
Sbjct: 46  RKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRE 105

Query: 202 YGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYR-----GYRPRFRRGPPRQRQPR 256
             +R +      +       +N+   E+ R  R+   R       + R +R   R+++ +
Sbjct: 106 RKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKK 165

Query: 257 EDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAAD 307
           E+  ++ + N+ +  + ++  +RR R+    + RR +  + +D K  +  D
Sbjct: 166 EEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTD 216


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 68/301 (22%), Positives = 109/301 (36%), Gaps = 61/301 (20%)

Query: 3    SEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGT 62
            ++A TQ  P A    PA S   +K     +G   GG    TS+  A  D K +       
Sbjct: 938  AQAVTQPVPLANKPVPAQSTFPSK-----TGGMEGGTAVATSSLTADNDFKPV------- 985

Query: 63   VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEA 122
                    G G  +  + ++          K  PR   R          + +EG +G  +
Sbjct: 986  --------GIGLPHSENNQD----------KGLPRPDNRD---------NRLEGNRG-NS 1017

Query: 123  ANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQA 182
            ++  GPG   ++ ++     N  R     RGP    Q+++++   G + +  E    G+ 
Sbjct: 1018 SSYRGPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQEDFRDKMMGRREDSREKMNRGEG 1077

Query: 183  QQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGR-PVRQNMYRGY 241
             + R                  RP  S   V G +    D   AG + R P R+   +  
Sbjct: 1078 SRDRGL---------------VRPGSSREKVPGGLQGSQDRGAAGSRERGPPRRAGSQER 1122

Query: 242  RPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGK 301
             P  R G   +  PR  G+ E    +G  ++     +R   R+   R R P  P+P DG 
Sbjct: 1123 GPLRRAGSRERIPPRRAGSRERGPPRGPGSR-----ERGLGRSDFGRDRGPFRPEPGDGG 1177

Query: 302  E 302
            E
Sbjct: 1178 E 1178



 Score = 35.8 bits (81), Expect = 0.053
 Identities = 77/342 (22%), Positives = 121/342 (35%), Gaps = 57/342 (16%)

Query: 3   SEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGT 62
           S + T  PP  P   P LS+A   PG    G   G P  LT AAP        +++V   
Sbjct: 609 SLSSTAPPPVMP--LPPLSSATPPPGIPPPGVPQGIPPQLT-AAPVPPASSSQSSQV--- 662

Query: 63  VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKY---LRSVGDGETVEFDVVEGEKG 119
                             +  +     +     P  Y   L+S G  E V       +  
Sbjct: 663 --------------PEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSA 708

Query: 120 AEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRG-----PPRNYQQNYQNSESGEKNEGS 174
              ++ +   G+    +  +      +  P R G     PPR+   +Y  S  G + +G 
Sbjct: 709 LPYSSFSSDQGLGESSAAPSQPITAVKDMPVRSGGLLPDPPRS---SYLESPRGPRFDGP 765

Query: 175 ESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVME-GADNQGAGEQ---- 229
               +  ++   P  R + P +   RP G RP+Y   P +G   + G   +G   Q    
Sbjct: 766 RRFEDLGSRCEGP--RPKGPRFEGNRPDGPRPRYEGHPAEGTKSKWGMIPRGPASQFYIT 823

Query: 230 ---GRPVRQN--MYRGYRPRFRRGPPRQRQPREDGN--EEDKENQGDETQGQQPPQRRYR 282
                  RQ+   ++G +P F  G   Q+QP+        +KE   D +  QQ       
Sbjct: 824 PSTSLSPRQSGPQWKGPKPAF--GQQHQQQPKSQAEPLSGNKEPLADTSSNQQK------ 875

Query: 283 RNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGGAE 324
              N++ +        D K+ KAA    EN S  + E   +E
Sbjct: 876 ---NFKMQSAAFSIAADVKDVKAAQ-SNENLSDSQQEPPKSE 913


>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
           sapiens]
          Length = 955

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 42/184 (22%), Positives = 68/184 (36%), Gaps = 4/184 (2%)

Query: 139 AADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQR-RPYRRRRFPPYY 197
           +A R+  R + + R   R+  ++ +   S      S S    + +   R Y+ R F  + 
Sbjct: 18  SASRSRSRSFSKSRSRSRSLSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGH- 76

Query: 198 MRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRE 257
             R Y RRP Y     +G    G  N+G     R   QN  + Y PR  R   R  + R 
Sbjct: 77  -NRGY-RRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRS 134

Query: 258 DGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPE 317
                   ++  +       +R      +    R E+ K +  KE K++   +  S A  
Sbjct: 135 PSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAG 194

Query: 318 AEQG 321
             QG
Sbjct: 195 DNQG 198


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 20/199 (10%)

Query: 127 GPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESG-----EKNEGSESAPEGQ 181
           GP   P QG  Y   + +  + P+R   P   Q   Q++  G     +     +  P G 
Sbjct: 406 GPPSGPQQGHGYPG-QPYGSQTPQRY--PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGY 462

Query: 182 AQQ-RRPYRRRRFP-PYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYR 239
            QQ + PY  ++ P P   + PY ++P    P  Q    +   +Q       P  Q+   
Sbjct: 463 GQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQP------PQLQSSQP 516

Query: 240 GYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQD 299
            Y  +  + PP Q+ P    +++    Q  ++Q   PP  + +    Y++++P+ P P  
Sbjct: 517 PYSQQPSQ-PPHQQSPAPYPSQQSTTQQHPQSQ---PPYSQPQAQSPYQQQQPQQPAPST 572

Query: 300 GKETKAADPPAENSSAPEA 318
             +  A   P    S   A
Sbjct: 573 LSQQAAYPQPQSQQSQQTA 591



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 39/179 (21%), Positives = 64/179 (35%), Gaps = 18/179 (10%)

Query: 148  YPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQ 207
            Y   R PP+  QQ  Q  +S      ++  P G      P+  ++   Y  ++   +RP 
Sbjct: 1319 YSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGS-----PFPSQQTTMYQQQQQNYKRPM 1373

Query: 208  YS--NPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKE 265
                 PP +    E      +  QG+P +Q +     P  +  P  Q+Q  +   ++D  
Sbjct: 1374 DGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQL-----PPAQPQPASQQQAAQPSPQQDVY 1428

Query: 266  NQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENS--SAPEAEQGG 322
            NQ     G   P              P+N  P      + + PP  N+  + P    GG
Sbjct: 1429 NQ----YGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGG 1483



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 138 YAADRNHYRRYPRRRGP--------PRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYR 189
           Y + ++  +++P+ + P        P   QQ  Q + S    + +   P+ Q  Q+  Y 
Sbjct: 534 YPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593

Query: 190 RRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRP 232
           ++RFPP           Q S+ P       G ++     Q RP
Sbjct: 594 QQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRP 636


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 20/199 (10%)

Query: 127 GPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESG-----EKNEGSESAPEGQ 181
           GP   P QG  Y   + +  + P+R   P   Q   Q++  G     +     +  P G 
Sbjct: 406 GPPSGPQQGHGYPG-QPYGSQTPQRY--PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGY 462

Query: 182 AQQ-RRPYRRRRFP-PYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYR 239
            QQ + PY  ++ P P   + PY ++P    P  Q    +   +Q       P  Q+   
Sbjct: 463 GQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQP------PQLQSSQP 516

Query: 240 GYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQD 299
            Y  +  + PP Q+ P    +++    Q  ++Q   PP  + +    Y++++P+ P P  
Sbjct: 517 PYSQQPSQ-PPHQQSPAPYPSQQSTTQQHPQSQ---PPYSQPQAQSPYQQQQPQQPAPST 572

Query: 300 GKETKAADPPAENSSAPEA 318
             +  A   P    S   A
Sbjct: 573 LSQQAAYPQPQSQQSQQTA 591



 Score = 32.3 bits (72), Expect = 0.59
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 138 YAADRNHYRRYPRRRGP--------PRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYR 189
           Y + ++  +++P+ + P        P   QQ  Q + S    + +   P+ Q  Q+  Y 
Sbjct: 534 YPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593

Query: 190 RRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRP 232
           ++RFPP           Q S+ P       G ++     Q RP
Sbjct: 594 QQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRP 636


>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
          Length = 391

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 49/200 (24%), Positives = 74/200 (37%), Gaps = 36/200 (18%)

Query: 149 PRRRGPPRNYQQNYQNS--------ESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRR 200
           PR RGPPR  +     S          G  ++G  S     +  R P   +R PP     
Sbjct: 100 PRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPP----- 154

Query: 201 PYGRRPQYSNPPVQGEVMEGADNQGAGEQGR-PVRQNMYRGYRPRFRRGPPRQR----QP 255
                P+   PP +     G     +G  GR PV +       P  R   P +R     P
Sbjct: 155 -----PRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSP 209

Query: 256 REDG-NEEDKENQGD-----ETQGQQPPQRRYR-RNFNYRRRRPENP------KPQDGKE 302
           R+DG + +D  +  D     +T+   PP R Y  R++ +   R + P      +   G++
Sbjct: 210 RDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRD 269

Query: 303 TKAADPPAENSSAPEAEQGG 322
              +D P+  S     E  G
Sbjct: 270 RDYSDHPSGGSYRDSYESYG 289


>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
           [Homo sapiens]
          Length = 1828

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 29/199 (14%)

Query: 132 PVQGSKYAAD-RNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRR 190
           P    +  AD +  +  YP   G  R+ +   + S    K E S  +  G  ++R     
Sbjct: 86  PASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRG---- 141

Query: 191 RRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQG-----RPVRQNMYRGYRPRF 245
                   +R   ++ ++   P + E  +G   +   EQ      RPV +      +PR 
Sbjct: 142 --------QRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPVPRRTVP--KPRV 191

Query: 246 RRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKA 305
           ++ P  QR  R+  +  D+++  DE   +Q  +RR  +N +Y        K  D  ET +
Sbjct: 192 KKQPKTQRGKRKKQDSSDEDDDDDEAPKRQ-TRRRAAKNVSY--------KEDDDFETDS 242

Query: 306 ADPPAENSSAPEAEQGGAE 324
            D         + +Q  +E
Sbjct: 243 DDLIEMTGEGVDEQQDNSE 261


>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
           [Homo sapiens]
          Length = 501

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 29/199 (14%)

Query: 132 PVQGSKYAAD-RNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRR 190
           P    +  AD +  +  YP   G  R+ +   + S    K E S  +  G  ++R     
Sbjct: 86  PASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRG---- 141

Query: 191 RRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQG-----RPVRQNMYRGYRPRF 245
                   +R   ++ ++   P + E  +G   +   EQ      RPV +      +PR 
Sbjct: 142 --------QRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPVPRRTVP--KPRV 191

Query: 246 RRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKA 305
           ++ P  QR  R+  +  D+++  DE   +Q  +RR  +N +Y        K  D  ET +
Sbjct: 192 KKQPKTQRGKRKKQDSSDEDDDDDEAPKRQ-TRRRAAKNVSY--------KEDDDFETDS 242

Query: 306 ADPPAENSSAPEAEQGGAE 324
            D         + +Q  +E
Sbjct: 243 DDLIEMTGEGVDEQQDNSE 261


>gi|14149807 coiled-coil domain containing 55 isoform 1 [Homo
           sapiens]
          Length = 558

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 43/195 (22%), Positives = 71/195 (36%), Gaps = 15/195 (7%)

Query: 132 PVQGSKYAADRNHYRRYPRRRG-PPRNYQQNYQNSESGEKNEGSESAPEGQAQQR----R 186
           P    K+   +NH R     RG   R++ +  + S   EK E      + + Q+     R
Sbjct: 276 PENDFKHHRSQNHSRSPSEERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTDR 335

Query: 187 PYRRRRFPPYYM----RRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYR 242
            YR+ R    +     R  + +R +  + P   +  E +D     E+ R      Y    
Sbjct: 336 DYRKERDSHRHREASHRDSHWKRHEQEDKPRARDQRERSDRVWKREKDR----EKYSQRE 391

Query: 243 PRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKE 302
               R    Q +P E G +E+K    +E    +  + RY  N  YR R       Q  + 
Sbjct: 392 QERDRQQNDQNRPSEKGEKEEKSKAKEEHMKVR--KERYENNDKYRDREKREVGVQSSER 449

Query: 303 TKAADPPAENSSAPE 317
            +     + NS A +
Sbjct: 450 NQDRKESSPNSRAKD 464


>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
           preproprotein [Homo sapiens]
          Length = 198

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 22/176 (12%)

Query: 156 RNYQQNYQNSESGEKNEGSESAPEGQAQQRR------PYRRRRFPPYYMRRPYGRRP--Q 207
           +N  ++    ES     G+   P  Q   +       P + +  PP    +P G  P  +
Sbjct: 17  QNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 76

Query: 208 YSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQ 267
              PP QG+      +     QG P +     G +P+   GPP Q   +  G     + Q
Sbjct: 77  PQGPPPQGDKSRSPRSPPGKPQGPPPQ-----GGKPQ---GPPPQGGNKPQGPPPPGKPQ 128

Query: 268 GDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPA-ENSSAPEAEQGG 322
           G   QG    Q     +      +P+ P  Q+G   +   PPA  N   P+A   G
Sbjct: 129 GPPAQGGSKSQ-----SARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 179



 Score = 36.2 bits (82), Expect = 0.041
 Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 28/134 (20%)

Query: 194 PPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQR 253
           P      P G  PQ  N P QG        QG   QG         G +P+   GPP   
Sbjct: 29  PSLIAGNPQGPSPQGGNKP-QGPPPPPGKPQGPPPQG---------GNKPQ---GPPPPG 75

Query: 254 QPREDGNEEDKENQGDETQGQQ---PPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPA 310
           +P+    + DK        G+    PPQ            +P+ P PQ G + +   PP 
Sbjct: 76  KPQGPPPQGDKSRSPRSPPGKPQGPPPQGG----------KPQGPPPQGGNKPQGPPPPG 125

Query: 311 ENSSAPEAEQGGAE 324
           +    P   QGG++
Sbjct: 126 KPQGPP--AQGGSK 137



 Score = 35.4 bits (80), Expect = 0.069
 Identities = 33/131 (25%), Positives = 47/131 (35%), Gaps = 16/131 (12%)

Query: 152 RGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNP 211
           +GPP       Q      K +G     +     R P  + + PP    +P G  PQ  N 
Sbjct: 58  QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNK 117

Query: 212 PVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQ--PREDGNEED---KEN 266
           P           QG    G+P       G + +  R PP + Q  P+++GN         
Sbjct: 118 P-----------QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPA 166

Query: 267 QGDETQGQQPP 277
            G+  Q Q PP
Sbjct: 167 GGNPQQPQAPP 177


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 11/192 (5%)

Query: 136 SKYAADRNHYR-RYPRRRGPPRNYQQNYQNSESG----EKNEGSESAPEGQAQQRRPYRR 190
           S+  A R   R R P RRG  R+     + S S      ++     A  G+++ R P RR
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623

Query: 191 RRFPPYYMRRPYGRRPQYSNPPVQGEVMEGAD--NQGAGEQGRPVRQNMYRGYRPRFRRG 248
           R       R P  RR +  +P  +           +G      P R+   R   P  R G
Sbjct: 624 RS----RTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSG 679

Query: 249 PPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADP 308
             R R P   G    +  +   ++ +   +R    +   +RR       +   +++ +  
Sbjct: 680 RSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQR 739

Query: 309 PAENSSAPEAEQ 320
            + ++S+PE ++
Sbjct: 740 RSRSNSSPEMKK 751



 Score = 36.6 bits (83), Expect = 0.031
 Identities = 42/192 (21%), Positives = 70/192 (36%), Gaps = 17/192 (8%)

Query: 134  QGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRF 193
            +GS+ + +     R P RR   R+  +  + +    ++  + S+PE   + R P R RR 
Sbjct: 1670 RGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPE--TRSRTPPRHRRS 1727

Query: 194  P------PYYMRRPYGRRPQYSNPPVQGEVMEGAD----NQGAGEQGRPVRQNMYRGYRP 243
            P      P    R   RR   S+P  +     G       +G        R+   R  R 
Sbjct: 1728 PSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRR 1787

Query: 244  RFRRGPP-----RQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQ 298
            R R G       R+++ R       +   G     + P ++   R  + RRR      P 
Sbjct: 1788 RDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPT 1847

Query: 299  DGKETKAADPPA 310
              K +++   PA
Sbjct: 1848 SRKRSRSRTSPA 1859



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 24/194 (12%)

Query: 135  GSKYAADRNHYRRYP--RRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRR- 191
            GS+ + D+    R P  +R     + + + + S S ++   S+S+P+ +A+ R P R+R 
Sbjct: 1518 GSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRS 1577

Query: 192  ---RFPPYYMR-RPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRR 247
                 P    + R   RR +  + P   +    A    +G    P  +       PR  R
Sbjct: 1578 RSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSR 1637

Query: 248  --GPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKA 305
                 + R P  +G      +   E+  + PP+ R       RR    +P+P    +TK+
Sbjct: 1638 SGSSSKGRGPSPEG------SSSTESSPEHPPKSR-----TARRGSRSSPEP----KTKS 1682

Query: 306  ADPPAENSSAPEAE 319
              PP   SS    E
Sbjct: 1683 RTPPRRRSSRSSPE 1696



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 133 VQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRR-- 190
           +  S  + +R+H R         R+   ++  S    ++    +A  G+++ R P +R  
Sbjct: 453 ISSSPTSKNRSHGRA-------KRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGH 505

Query: 191 -RRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGP 249
            R   P + R    +R   S  P +          G        R    RG     RRG 
Sbjct: 506 SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRS----RNTQRRGRSRSARRGR 561

Query: 250 PRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPP 309
              R P   G    +          + P RR  R+    RRR  +  P     +++  P 
Sbjct: 562 SHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA 621

Query: 310 AENS 313
              S
Sbjct: 622 RRRS 625



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 28/176 (15%)

Query: 147 RYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRP 206
           R P +RG  R+    ++ S S ++  G   +P+ + + R P                +RP
Sbjct: 498 RTPTKRGHSRSRSPQWRRSRSAQR-WGRSRSPQRRGRSRSP----------------QRP 540

Query: 207 QYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKEN 266
            +S              +G     R  R +     R    RG  R R P   G    +  
Sbjct: 541 GWSRS-------RNTQRRGRSRSARRGRSHS----RSPATRGRSRSRTPARRGRSRSRTP 589

Query: 267 QGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGG 322
               ++ + P +RR R     RR R  +  P   +    +     + S   A + G
Sbjct: 590 ARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSG 645



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 37/166 (22%), Positives = 55/166 (33%), Gaps = 12/166 (7%)

Query: 146  RRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRR 205
            RR  R R PP   +++   + +  +   S + P     +RR   R R PP   RR   R 
Sbjct: 1920 RRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPP---VTRRRS--RSRTPPVTRRRSRSRT 1974

Query: 206  PQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKE 265
               +    +         +         R+      R R R  P  +R+ R       + 
Sbjct: 1975 SPITRRRSRSRTSPVTRRRSRSRTSPVTRR------RSRSRTSPVTRRRSRSRTPPAIRR 2028

Query: 266  NQGDETQGQQPPQRRYRRNFNYRRR-RPENPKPQDGKETKAADPPA 310
                 T      + R R     RRR R   P+   GK +    PPA
Sbjct: 2029 RSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 2074


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
            sapiens]
          Length = 2191

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 71/335 (21%), Positives = 111/335 (33%), Gaps = 79/335 (23%)

Query: 3    SEAETQQPPAAPPAAPALSAADTKPGT---TGSGAGSGGPGGLTSAAPA----------- 48
            S  +T++ P   P +PA S +   P T   TGS + +  PG L    PA           
Sbjct: 1110 STGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQ 1169

Query: 49   GGDKKVIATK-------------------------------VLGTVKWFNVRNGYGFINR 77
            GG    I+                                 V+G + +   ++ +G + +
Sbjct: 1170 GGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRK 1229

Query: 78   NDTKEDVFVHQTAIKKNN--------PRKYLRSVGDGETVEF------DVVEGEKGAEAA 123
                 + F+ Q  +  ++        P   + ++G G+  +F      D      G +  
Sbjct: 1230 VPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYP 1289

Query: 124  NVTGPGGVPVQGSK----YAADRNHYRRYPRRRGPPR--------NYQQNYQNSESGEKN 171
                P G P  G      Y    N+ R      GPP         N Q + Q  E   + 
Sbjct: 1290 GQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQY 1349

Query: 172  EGSESAPEG---QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGE 228
             GS S P+    Q Q   PY R R       + +G  PQ    P+Q      + ++G  +
Sbjct: 1350 GGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQ-----SSSSEGPQQ 1404

Query: 229  QGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEED 263
                 R +M   Y+ R   G P Q  P    N  D
Sbjct: 1405 NMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD 1439



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 78/340 (22%), Positives = 115/340 (33%), Gaps = 60/340 (17%)

Query: 12  AAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSA---------APAGGDKKVIATKVLGT 62
           A   AA A +AA    G  G G  S G G L+S           P GG    ++    G+
Sbjct: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339

Query: 63  VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEK---- 118
                 R  +   N++ +     ++Q      +P   +RS G G   E+           
Sbjct: 340 AAGGFQR--FAGQNQHPSGATPTLNQLL---TSPSPMMRSYG-GSYPEYSSPSAPPPPPS 393

Query: 119 ---------GAEAANVTGPGGVPV---QGSKYAA---------DRNHYRRYPRRRGPPRN 157
                    GA A       G+ +    G++YAA          R+H    P   GP   
Sbjct: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453

Query: 158 YQQNYQNSESGEKNE---GSESAPEGQAQQRRPYRRRRF-PPYYMRRPYGRRPQYSNPPV 213
             Q         K     G  S P  Q QQ  PY    + PP   R P G         +
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIG---------I 504

Query: 214 QGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQG 273
           QG          AG Q    + +    ++  F   PP+  Q    G  +  +      Q 
Sbjct: 505 QGRTPGAM----AGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQP 560

Query: 274 QQP---PQRRYRRNFNYRRRRPENPKPQDGKETKAADPPA 310
           Q P   PQ +Y  + + +R +P+    Q+G  T++  P A
Sbjct: 561 QPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
            sapiens]
          Length = 2231

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 71/335 (21%), Positives = 111/335 (33%), Gaps = 79/335 (23%)

Query: 3    SEAETQQPPAAPPAAPALSAADTKPGT---TGSGAGSGGPGGLTSAAPA----------- 48
            S  +T++ P   P +PA S +   P T   TGS + +  PG L    PA           
Sbjct: 1150 STGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQ 1209

Query: 49   GGDKKVIATK-------------------------------VLGTVKWFNVRNGYGFINR 77
            GG    I+                                 V+G + +   ++ +G + +
Sbjct: 1210 GGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRK 1269

Query: 78   NDTKEDVFVHQTAIKKNN--------PRKYLRSVGDGETVEF------DVVEGEKGAEAA 123
                 + F+ Q  +  ++        P   + ++G G+  +F      D      G +  
Sbjct: 1270 VPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYP 1329

Query: 124  NVTGPGGVPVQGSK----YAADRNHYRRYPRRRGPPR--------NYQQNYQNSESGEKN 171
                P G P  G      Y    N+ R      GPP         N Q + Q  E   + 
Sbjct: 1330 GQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQY 1389

Query: 172  EGSESAPEG---QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGE 228
             GS S P+    Q Q   PY R R       + +G  PQ    P+Q      + ++G  +
Sbjct: 1390 GGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQ-----SSSSEGPQQ 1444

Query: 229  QGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEED 263
                 R +M   Y+ R   G P Q  P    N  D
Sbjct: 1445 NMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD 1479



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 22/132 (16%)

Query: 195 PYYMRRP--YGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGP--P 250
           P  M+RP  YG      + P Q     G      G Q  P+     +G  P    G   P
Sbjct: 462 PMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIG---IQGRTPGAMAGMQYP 518

Query: 251 RQRQPREDGNEEDKENQGDETQGQQP------------PQRRYRRNFNYRRRRPENPKPQ 298
           +Q+ P + G +      G   QGQQP            PQ +Y  + + +R +P+    Q
Sbjct: 519 QQQMPPQYGQQGVS---GYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQ 575

Query: 299 DGKETKAADPPA 310
           +G  T++  P A
Sbjct: 576 EGYGTRSQPPLA 587


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
            sapiens]
          Length = 2178

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 71/335 (21%), Positives = 111/335 (33%), Gaps = 79/335 (23%)

Query: 3    SEAETQQPPAAPPAAPALSAADTKPGT---TGSGAGSGGPGGLTSAAPA----------- 48
            S  +T++ P   P +PA S +   P T   TGS + +  PG L    PA           
Sbjct: 1097 STGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQ 1156

Query: 49   GGDKKVIATK-------------------------------VLGTVKWFNVRNGYGFINR 77
            GG    I+                                 V+G + +   ++ +G + +
Sbjct: 1157 GGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRK 1216

Query: 78   NDTKEDVFVHQTAIKKNN--------PRKYLRSVGDGETVEF------DVVEGEKGAEAA 123
                 + F+ Q  +  ++        P   + ++G G+  +F      D      G +  
Sbjct: 1217 VPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYP 1276

Query: 124  NVTGPGGVPVQGSK----YAADRNHYRRYPRRRGPPR--------NYQQNYQNSESGEKN 171
                P G P  G      Y    N+ R      GPP         N Q + Q  E   + 
Sbjct: 1277 GQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQY 1336

Query: 172  EGSESAPEG---QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGE 228
             GS S P+    Q Q   PY R R       + +G  PQ    P+Q      + ++G  +
Sbjct: 1337 GGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQ-----SSSSEGPQQ 1391

Query: 229  QGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEED 263
                 R +M   Y+ R   G P Q  P    N  D
Sbjct: 1392 NMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD 1426



 Score = 32.7 bits (73), Expect = 0.45
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 22/132 (16%)

Query: 195 PYYMRRP--YGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGP--P 250
           P  M+RP  YG      + P Q     G      G Q  P+     +G  P    G   P
Sbjct: 462 PMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIG---IQGRTPGAMAGMQYP 518

Query: 251 RQRQPREDGNEEDKENQGDETQGQQP------------PQRRYRRNFNYRRRRPENPKPQ 298
           +Q+ P + G +      G   QGQQP            PQ +Y  + + +R +P+    Q
Sbjct: 519 QQQMPPQYGQQGVS---GYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQ 575

Query: 299 DGKETKAADPPA 310
           +G  T++  P A
Sbjct: 576 EGYGTRSQPPLA 587


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,141,354
Number of Sequences: 37866
Number of extensions: 1040547
Number of successful extensions: 9815
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 375
Number of HSP's that attempted gapping in prelim test: 7986
Number of HSP's gapped (non-prelim): 1861
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.