LIN28 3170

Name: LIN28	Sequence: fasta or formatted (209aa)		NCBI GI: 13375938
Description: lin-28 homolog		Referenced in: RNases and RNA Stability Stem Cells and Early Development Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 21 2 C cysteine 4.3 9 1 D aspartate 2.9 6 1 E glutamate 9.1 19 5 F phenylalanine 5.3 11 1 G glycine 10.0 21 2 H histidine 3.8 8 2 I isoleucine 2.4 5 1 K lysine 8.1 17 2 L leucine 5.7 12 2 M methionine 2.9 6 1 N asparagine 1.9 4 1 P proline 7.2 15 2 Q glutamine 5.3 11 2 R arginine 5.3 11 2 S serine 7.2 15 1 T threonine 2.4 5 1 V valine 4.8 10 1 W tryptophan 0.5 1 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lin-28 homolog LIN28B 0.590 lin-28 homolog B YBX2 0.104 Y box binding protein 2 CSDA 0.102 cold shock domain protein A isoform a CSDA 0.100 cold shock domain protein A isoform b YBX1 0.092 nuclease sensitive element binding protein 1 ZCCHC13 0.046 zinc finger, CCHC domain containing 13 ZCCHC7 0.034 zinc finger, CCHC domain containing 7 CNBP 0.034 zinc finger protein 9 isoform 6 CNBP 0.034 zinc finger protein 9 isoform 3 CNBP 0.029 zinc finger protein 9 isoform 4 CNBP 0.029 zinc finger protein 9 isoform 5 CNBP 0.029 zinc finger protein 9 isoform 2 CNBP 0.029 zinc finger protein 9 isoform 1 ZCCHC9 0.029 zinc finger, CCHC domain containing 9 ZCCHC9 0.029 zinc finger, CCHC domain containing 9 ZCCHC9 0.029 zinc finger, CCHC domain containing 9 PEG10 0.024 paternally expressed 10 isoform RF1/2 ZCCHC3 0.019 zinc finger, CCHC domain containing 3 C11orf87 0.017 hypothetical protein LOC399947 LOC100292573 0.017 PREDICTED: hypothetical protein LOC100290137 0.017 PREDICTED: hypothetical protein XP_002347927 LOC100287408 0.017 PREDICTED: hypothetical protein XP_002344194 ZCCHC14 0.017 zinc finger, CCHC domain containing 14 LOXL2 0.015 lysyl oxidase-like 2 precursor ZNF274 0.015 zinc finger protein 274 isoform c ZNF274 0.015 zinc finger protein 274 isoform a ZNF274 0.015 zinc finger protein 274 isoform b ZCCHC24 0.012 zinc finger, CCHC domain containing 24 ZCCHC8 0.012 zinc finger, CCHC domain containing 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.