Guide to the Human Genome
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Name: LPPR4 Sequence: fasta or formatted (763aa) NCBI GI: 33636722
Description:

plasticity related gene 1

Referenced in:

Lipid Metabolism
Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         44           2
 C cysteine            2.4         18           2
 D aspartate           3.5         27           1
 E glutamate           5.5         42           2
 F phenylalanine       3.0         23           1
 G glycine             8.3         63           3
 H histidine           2.4         18           4
 I isoleucine          6.4         49           2
 K lysine              4.6         35           1
 L leucine             8.1         62           2
 M methionine          1.8         14           1
 N asparagine          5.6         43           2
 P proline             6.2         47           2
 Q glutamine           3.3         25           2
 R arginine            6.4         49           2
 S serine             12.5         95           3
 T threonine           5.6         43           2
 V valine              5.5         42           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plasticity related gene 1 
PRG2                  0.367   plasticity-related protein 2 
PRG-3                 0.120   plasticity related gene 3 
PRG-3                 0.120   plasticity related gene 3 
PAP2D                 0.100   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
PAP2D                 0.100   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
LPPR2                 0.091   lipid phosphate phosphatase-related protein type 2 [...
PPAP2A                0.064   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PPAP2B                0.060   phosphatidic acid phosphatase type 2B 
PPAP2B                0.060   phosphatidic acid phosphatase type 2B 
PPAP2A                0.059   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2C                0.046   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                0.042   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
PPAP2C                0.035   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PPAPDC1B              0.015   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1A              0.013   phosphatidic acid phosphatase type 2 domain containi...
PPAPDC1B              0.011   phosphatidic acid phosphatase type 2 domain contain...
ANK2                  0.009   ankyrin 2 isoform 1 
BOD1L                 0.009   biorientation of chromosomes in cell division 1-like...
DUSP11                0.008   dual specificity phosphatase 11 
PPAPDC3               0.007   phosphatidic acid phosphatase type 2 domain contain...
ESYT2                 0.007   family with sequence similarity 62 (C2 domain contai...
SRRM2                 0.007   splicing coactivator subunit SRm300 
TNS4                  0.006   tensin 4 
CIZ1                  0.006   CDKN1A interacting zinc finger protein 1 isoform 1 ...
CIZ1                  0.006   CDKN1A interacting zinc finger protein 1 isoform 1 [...
PHC2                  0.006   polyhomeotic-like 2 isoform a 
PPAPDC1B              0.005   phosphatidic acid phosphatase type 2 domain contain...
SPEN                  0.005   spen homolog, transcriptional regulator 
C19orf44              0.005   hypothetical protein LOC84167 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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