Guide to the Human Genome
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Name: PPAP2A Sequence: fasta or formatted (284aa) NCBI GI: 29171736
Description:

phosphatidic acid phosphatase type 2A isoform 1

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [285aa] phosphatidic acid phosphatase type 2A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         18           3
 C cysteine            2.5          7           1
 D aspartate           4.9         14           1
 E glutamate           3.9         11           2
 F phenylalanine       5.6         16           2
 G glycine             6.3         18           2
 H histidine           3.5         10           2
 I isoleucine          7.7         22           3
 K lysine              4.2         12           1
 L leucine            10.9         31           2
 M methionine          1.4          4           1
 N asparagine          3.2          9           2
 P proline             4.2         12           1
 Q glutamine           2.1          6           1
 R arginine            5.3         15           1
 S serine              8.5         24           2
 T threonine           5.6         16           2
 V valine              6.3         18           1
 W tryptophan          1.1          3           1
 Y tyrosine            6.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2A isoform 1 [Hom... 
PPAP2A                0.874   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2C                0.537   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                0.508   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
PPAP2B                0.454   phosphatidic acid phosphatase type 2B 
PPAP2B                0.454   phosphatidic acid phosphatase type 2B 
PPAP2C                0.420   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PAP2D                 0.180   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
PAP2D                 0.180   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
LPPR4                 0.172   plasticity related gene 1 
PRG-3                 0.147   plasticity related gene 3 
PRG-3                 0.147   plasticity related gene 3 
LPPR2                 0.122   lipid phosphate phosphatase-related protein type 2 [...
PRG2                  0.092   plasticity-related protein 2 
PPAPDC1B              0.077   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1A              0.070   phosphatidic acid phosphatase type 2 domain containi...
PPAPDC1B              0.061   phosphatidic acid phosphatase type 2 domain contain...
DOLPP1                0.038   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
PPAPDC1B              0.023   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC3               0.014   phosphatidic acid phosphatase type 2 domain contain...
G6PC3                 0.009   glucose-6-phosphatase catalytic subunit 3 
FUT10                 0.007   fucosyltransferase 10 
NCAN                  0.007   chondroitin sulfate proteoglycan 3 
PPP2R5E               0.007   epsilon isoform of regulatory subunit B56, protein ph...
CADM4                 0.007   cell adhesion molecule 4 
KIAA0746              0.005   hypothetical protein LOC23231 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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