Guide to the Human Genome
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Name: PPAP2B Sequence: fasta or formatted (311aa) NCBI GI: 29171740
Description:

phosphatidic acid phosphatase type 2B

Referenced in:

Lipid Metabolism

Other entries for this name:
alt mRNA [311aa] phosphatidic acid phosphatase type 2B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         22           2
 C cysteine            3.5         11           2
 D aspartate           4.2         13           2
 E glutamate           2.6          8           1
 F phenylalanine       6.4         20           2
 G glycine             5.8         18           2
 H histidine           2.6          8           2
 I isoleucine          8.0         25           2
 K lysine              5.5         17           2
 L leucine            10.3         32           2
 M methionine          2.6          8           2
 N asparagine          4.5         14           3
 P proline             4.5         14           1
 Q glutamine           3.2         10           1
 R arginine            5.8         18           2
 S serine              8.0         25           1
 T threonine           4.5         14           2
 V valine              5.5         17           1
 W tryptophan          0.3          1           1
 Y tyrosine            5.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2B 
PPAP2B                1.000   phosphatidic acid phosphatase type 2B 
PPAP2A                0.416   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PPAP2A                0.408   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2C                0.373   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                0.354   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
PPAP2C                0.296   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PRG-3                 0.176   plasticity related gene 3 
PRG-3                 0.176   plasticity related gene 3 
PAP2D                 0.156   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
PAP2D                 0.156   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
LPPR4                 0.148   plasticity related gene 1 
LPPR2                 0.132   lipid phosphate phosphatase-related protein type 2 [...
PRG2                  0.086   plasticity-related protein 2 
PPAPDC1B              0.071   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1B              0.059   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1A              0.053   phosphatidic acid phosphatase type 2 domain containi...
PPAPDC1B              0.028   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC3               0.020   phosphatidic acid phosphatase type 2 domain contain...
DOLPP1                0.013   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
PPAPDC2               0.012   phosphatidic acid phosphatase type 2 domain containi...
FXYD3                 0.008   FXYD domain containing ion transport regulator 3 is...
G6PC3                 0.008   glucose-6-phosphatase catalytic subunit 3 
ALCAM                 0.007   activated leukocyte cell adhesion molecule 
PEAR1                 0.007   platelet endothelial aggregation receptor 1 
FXYD3                 0.007   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.007   FXYD domain containing ion transport regulator 3 isof...
FXYD3                 0.005   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.005   FXYD domain containing ion transport regulator 3 is...
FXYD3                 0.005   FXYD domain containing ion transport regulator 3 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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