Guide to the Human Genome
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Name: PPAP2C Sequence: fasta or formatted (309aa) NCBI GI: 29171747
Description:

phosphatidic acid phosphatase type 2C isoform 3

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [232aa] phosphatidic acid phosphatase type 2C isoform 2
alt prot [288aa] phosphatidic acid phosphatase type 2C isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         29           2
 C cysteine            2.9          9           1
 D aspartate           4.2         13           2
 E glutamate           3.2         10           3
 F phenylalanine       4.5         14           2
 G glycine             7.4         23           1
 H histidine           3.2         10           2
 I isoleucine          2.3          7           1
 K lysine              2.9          9           1
 L leucine            11.3         35           2
 M methionine          1.6          5           1
 N asparagine          2.3          7           2
 P proline             6.5         20           3
 Q glutamine           2.9          9           2
 R arginine            6.8         21           1
 S serine              7.1         22           3
 T threonine           4.9         15           1
 V valine              8.7         27           1
 W tryptophan          1.3          4           1
 Y tyrosine            6.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2C isoform 3 [Hom... 
PPAP2C                0.867   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                0.733   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PPAP2A                0.460   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PPAP2A                0.429   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2B                0.350   phosphatidic acid phosphatase type 2B 
PPAP2B                0.350   phosphatidic acid phosphatase type 2B 
PAP2D                 0.156   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
PAP2D                 0.153   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
LPPR2                 0.128   lipid phosphate phosphatase-related protein type 2 [...
PRG-3                 0.109   plasticity related gene 3 
PRG-3                 0.109   plasticity related gene 3 
LPPR4                 0.102   plasticity related gene 1 
PPAPDC1B              0.083   phosphatidic acid phosphatase type 2 domain contain...
PRG2                  0.081   plasticity-related protein 2 
PPAPDC1A              0.067   phosphatidic acid phosphatase type 2 domain containi...
PPAPDC1B              0.063   phosphatidic acid phosphatase type 2 domain contain...
DOLPP1                0.023   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
PPAPDC1B              0.021   phosphatidic acid phosphatase type 2 domain contain...
GPR39                 0.011   G protein-coupled receptor 39 
PPAPDC3               0.010   phosphatidic acid phosphatase type 2 domain contain...
G6PC3                 0.010   glucose-6-phosphatase catalytic subunit 3 
ZSWIM5                0.008   zinc finger, SWIM domain containing 5 
HOXC4                 0.007   homeobox C4 
HOXC4                 0.007   homeobox C4 
P2RX2                 0.007   purinergic receptor P2X2 isoform B 
P2RX2                 0.007   purinergic receptor P2X2 isoform H 
P2RX2                 0.007   purinergic receptor P2X2 isoform I 
P2RX2                 0.007   purinergic receptor P2X2 isoform D 
P2RX2                 0.007   purinergic receptor P2X2 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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