Guide to the Human Genome
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Name: PPAP2C Sequence: fasta or formatted (232aa) NCBI GI: 29171745
Description:

phosphatidic acid phosphatase type 2C isoform 2

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [309aa] phosphatidic acid phosphatase type 2C isoform 3
alt prot [288aa] phosphatidic acid phosphatase type 2C isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         22           2
 C cysteine            3.0          7           1
 D aspartate           4.3         10           1
 E glutamate           3.4          8           3
 F phenylalanine       5.2         12           2
 G glycine             5.6         13           1
 H histidine           3.0          7           2
 I isoleucine          1.7          4           1
 K lysine              3.4          8           1
 L leucine            12.5         29           2
 M methionine          1.7          4           1
 N asparagine          2.6          6           2
 P proline             3.4          8           2
 Q glutamine           2.6          6           1
 R arginine            5.6         13           1
 S serine              8.2         19           3
 T threonine           5.2         12           1
 V valine             10.3         24           1
 W tryptophan          1.7          4           1
 Y tyrosine            6.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2C isoform 2 [Hom... 
PPAP2C                1.000   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                1.000   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
PPAP2A                0.519   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PPAP2A                0.508   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2B                0.399   phosphatidic acid phosphatase type 2B 
PPAP2B                0.399   phosphatidic acid phosphatase type 2B 
PAP2D                 0.188   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
PAP2D                 0.184   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
LPPR2                 0.169   lipid phosphate phosphatase-related protein type 2 [...
PRG-3                 0.142   plasticity related gene 3 
PRG-3                 0.142   plasticity related gene 3 
LPPR4                 0.118   plasticity related gene 1 
PPAPDC1B              0.113   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1A              0.091   phosphatidic acid phosphatase type 2 domain containi...
PRG2                  0.089   plasticity-related protein 2 
PPAPDC1B              0.086   phosphatidic acid phosphatase type 2 domain contain...
DOLPP1                0.031   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
PPAPDC1B              0.029   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC3               0.013   phosphatidic acid phosphatase type 2 domain contain...
G6PC3                 0.013   glucose-6-phosphatase catalytic subunit 3 
P2RX2                 0.009   purinergic receptor P2X2 isoform B 
P2RX2                 0.009   purinergic receptor P2X2 isoform H 
P2RX2                 0.009   purinergic receptor P2X2 isoform I 
P2RX2                 0.009   purinergic receptor P2X2 isoform D 
P2RX2                 0.009   purinergic receptor P2X2 isoform A 
P2RX2                 0.009   purinergic receptor P2X2 isoform C 
PEAR1                 0.007   platelet endothelial aggregation receptor 1 
MAN1B1                0.007   alpha 1,2-mannosidase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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