Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PAP2D Sequence: fasta or formatted (316aa) NCBI GI: 61102719
Description:

phosphatidic acid phosphatase type 2d isoform 2

Referenced in:

Lipid Metabolism
Neurons

Other entries for this name:
alt prot [321aa] phosphatidic acid phosphatase type 2d isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         31           2
 C cysteine            3.2         10           2
 D aspartate           2.8          9           1
 E glutamate           4.4         14           2
 F phenylalanine       6.0         19           2
 G glycine             6.0         19           1
 H histidine           1.9          6           1
 I isoleucine          5.7         18           2
 K lysine              3.2         10           1
 L leucine            10.4         33           2
 M methionine          3.8         12           1
 N asparagine          4.7         15           2
 P proline             5.4         17           2
 Q glutamine           3.2         10           2
 R arginine            3.8         12           2
 S serine              4.1         13           2
 T threonine           7.6         24           1
 V valine              8.9         28           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2d isoform 2 [Hom... 
PAP2D                 0.989   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
PRG-3                 0.570   plasticity related gene 3 
PRG-3                 0.570   plasticity related gene 3 
LPPR2                 0.461   lipid phosphate phosphatase-related protein type 2 [...
LPPR4                 0.244   plasticity related gene 1 
PRG2                  0.218   plasticity-related protein 2 
PPAP2A                0.168   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2A                0.163   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PPAP2C                0.156   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                0.156   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
PPAP2B                0.155   phosphatidic acid phosphatase type 2B 
PPAP2B                0.155   phosphatidic acid phosphatase type 2B 
PPAP2C                0.138   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PPAPDC1A              0.062   phosphatidic acid phosphatase type 2 domain containi...
PPAPDC1B              0.052   phosphatidic acid phosphatase type 2 domain contain...
PPAPDC1B              0.031   phosphatidic acid phosphatase type 2 domain contain...
DOLPP1                0.021   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
PPAPDC3               0.018   phosphatidic acid phosphatase type 2 domain contain...
ZMYM6                 0.016   zinc finger protein 258 
PPAPDC1B              0.013   phosphatidic acid phosphatase type 2 domain contain...
FAM23A                0.008   hypothetical protein LOC653567 
LOC100289299          0.008   PREDICTED: hypothetical protein XP_002343016 isofor...
LOC100289299          0.008   PREDICTED: hypothetical protein XP_002343015 isofor...
MARCH2                0.005   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH2                0.005   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press