Guide to the Human Genome
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Name: CIZ1 Sequence: fasta or formatted (898aa) NCBI GI: 196115147
Description:

CDKN1A interacting zinc finger protein 1 isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [842aa] CDKN1A interacting zinc finger protein 1 isoform 2
alt prot [837aa] CDKN1A interacting zinc finger protein 1 isoform 3
alt prot [818aa] CDKN1A interacting zinc finger protein 1 isoform 4
alt mRNA [898aa] CDKN1A interacting zinc finger protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         57           2
 C cysteine            2.1         19           1
 D aspartate           3.5         31           2
 E glutamate           7.5         67           5
 F phenylalanine       2.1         19           2
 G glycine             4.2         38           3
 H histidine           2.2         20           1
 I isoleucine          1.7         15           1
 K lysine              4.3         39           1
 L leucine             8.8         79           3
 M methionine          2.0         18           1
 N asparagine          2.2         20           1
 P proline            11.5        103           3
 Q glutamine          15.6        140           6
 R arginine            4.8         43           2
 S serine              7.6         68           3
 T threonine           6.1         55           2
 V valine              5.8         52           3
 W tryptophan          0.3          3           1
 Y tyrosine            1.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDKN1A interacting zinc finger protein 1 isoform 1 ... 
CIZ1                  1.000   CDKN1A interacting zinc finger protein 1 isoform 1 [...
CIZ1                  0.894   CDKN1A interacting zinc finger protein 1 isoform 3 ...
CIZ1                  0.887   CDKN1A interacting zinc finger protein 1 isoform 2 ...
CIZ1                  0.852   CDKN1A interacting zinc finger protein 1 isoform 4 ...
MLL2                  0.036   myeloid/lymphoid or mixed-lineage leukemia 2 
BPTF                  0.036   bromodomain PHD finger transcription factor isoform ...
MED15                 0.036   mediator complex subunit 15 isoform a 
ZNF853                0.033   zinc finger protein 853 
PHC3                  0.032   polyhomeotic like 3 
NCOA6                 0.032   nuclear receptor coactivator 6 
AAK1                  0.031   AP2 associated kinase 1 
TCERG1                0.031   transcription elongation regulator 1 isoform 2 [Homo...
MED15                 0.030   mediator complex subunit 15 isoform b 
MAML2                 0.027   mastermind-like 2 
BPTF                  0.027   bromodomain PHD finger transcription factor isoform ...
BRD4                  0.027   bromodomain-containing protein 4 isoform long 
TTN                   0.026   titin isoform N2-A 
YLPM1                 0.026   YLP motif containing 1 
EP300                 0.026   E1A binding protein p300 
RP1L1                 0.026   retinitis pigmentosa 1-like 1 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
EP400                 0.026   E1A binding protein p400 
FOXP2                 0.025   forkhead box P2 isoform I 
TCERG1                0.025   transcription elongation regulator 1 isoform 1 [Homo...
FOXP2                 0.024   forkhead box P2 isoform II 
POU6F2                0.024   POU domain, class 6, transcription factor 2 
RERE                  0.024   atrophin-1 like protein isoform b 
RERE                  0.024   atrophin-1 like protein isoform a 
RERE                  0.024   atrophin-1 like protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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