Guide to the Human Genome
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Name: PPAPDC3 Sequence: fasta or formatted (271aa) NCBI GI: 223029457
Description:

phosphatidic acid phosphatase type 2 domain containing 3

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         26           2
 C cysteine            2.2          6           1
 D aspartate           3.0          8           1
 E glutamate           3.0          8           2
 F phenylalanine       3.0          8           2
 G glycine             8.1         22           2
 H histidine           1.8          5           2
 I isoleucine          5.2         14           1
 K lysine              3.3          9           1
 L leucine            13.7         37           3
 M methionine          4.1         11           1
 N asparagine          2.6          7           2
 P proline             6.3         17           3
 Q glutamine           4.1         11           2
 R arginine            7.4         20           2
 S serine              9.6         26           2
 T threonine           3.0          8           1
 V valine              7.0         19           1
 W tryptophan          1.8          5           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2 domain contain... 
PPAPDC2               0.438   phosphatidic acid phosphatase type 2 domain containi...
PPAP2B                0.023   phosphatidic acid phosphatase type 2B 
PPAP2B                0.023   phosphatidic acid phosphatase type 2B 
SGPP1                 0.023   sphingosine-1-phosphate phosphatase 1 
PAP2D                 0.021   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
PAP2D                 0.021   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
DMWD                  0.021   dystrophia myotonica-containing WD repeat motif prot...
LPPR4                 0.019   plasticity related gene 1 
LOC643355             0.018   PREDICTED: hypothetical protein 
LOC643355             0.018   PREDICTED: hypothetical protein 
PPAP2A                0.016   phosphatidic acid phosphatase type 2A isoform 2 [Hom...
PPAP2A                0.016   phosphatidic acid phosphatase type 2A isoform 1 [Hom...
PRG-3                 0.016   plasticity related gene 3 
PRG-3                 0.016   plasticity related gene 3 
MCTP1                 0.016   multiple C2 domains, transmembrane 1 isoform L [Hom...
KHSRP                 0.014   KH-type splicing regulatory protein 
C1orf175              0.014   hypothetical protein LOC374977 
PPP1R12C              0.014   protein phosphatase 1, regulatory subunit 12C 
SGPP2                 0.014   sphingosine-1-phosphate phosphotase 2 
ATXN2                 0.014   ataxin 2 
RIMBP3                0.014   DKFZP434H0735 protein 
WDR90                 0.014   WD repeat domain 90 
RIMBP3B               0.014   RIMS binding protein 3B 
RIMBP3C               0.014   RIMS binding protein 3C 
FGFBP3                0.012   fibroblast growth factor binding protein 3 
PPAP2C                0.012   phosphatidic acid phosphatase type 2C isoform 1 [Homo...
PPAP2C                0.012   phosphatidic acid phosphatase type 2C isoform 2 [Hom...
PPAP2C                0.012   phosphatidic acid phosphatase type 2C isoform 3 [Hom...
LOC100292307          0.010   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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