Guide to the Human Genome
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Name: ACCN4 Sequence: fasta or formatted (647aa) NCBI GI: 33519444
Description:

amiloride-sensitive cation channel 4 isoform 2

Referenced in:

Sodium Channels

Other entries for this name:
alt prot [666aa] amiloride-sensitive cation channel 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         66           2
 C cysteine            2.9         19           1
 D aspartate           3.6         23           1
 E glutamate           6.5         42           2
 F phenylalanine       3.2         21           2
 G glycine            10.4         67           3
 H histidine           3.2         21           3
 I isoleucine          3.2         21           1
 K lysine              2.6         17           1
 L leucine            11.3         73           2
 M methionine          1.9         12           1
 N asparagine          2.3         15           1
 P proline             7.7         50           2
 Q glutamine           4.3         28           2
 R arginine            7.7         50           2
 S serine              7.6         49           2
 T threonine           4.3         28           1
 V valine              3.4         22           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.8         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 4 isoform 2 [Homo... 
ACCN4                 0.992   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN2                 0.333   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN2                 0.316   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN3                 0.306   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.306   amiloride-sensitive cation channel 3 isoform b 
ACCN1                 0.304   amiloride-sensitive cation channel 1, neuronal isofor...
ACCN3                 0.303   amiloride-sensitive cation channel 3 isoform c 
ACCN1                 0.281   amiloride-sensitive cation channel 1, neuronal isofo...
ACCN5                 0.116   amiloride-sensitive cation channel 5, intestinal [Ho...
SCNN1B                0.078   sodium channel, nonvoltage-gated 1, beta 
SCNN1D                0.078   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.078   sodium channel, nonvoltage-gated 1, delta isoform 1...
SCNN1A                0.071   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.071   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.071   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1G                0.052   sodium channel, nonvoltage-gated 1, gamma 
FKBP15                0.012   FK506 binding protein 15, 133kDa 
MLLT6                 0.012   myeloid/lymphoid or mixed-lineage leukemia (trithora...
DTX3                  0.011   deltex homolog 3 
ZNF384                0.011   nuclear matrix transcription factor 4 isoform c [Hom...
ZNF384                0.011   nuclear matrix transcription factor 4 isoform b [Hom...
ZNF384                0.011   nuclear matrix transcription factor 4 isoform b [Hom...
ZNF384                0.011   nuclear matrix transcription factor 4 isoform a [Hom...
ZNF384                0.011   nuclear matrix transcription factor 4 isoform a [Hom...
ZNF384                0.011   nuclear matrix transcription factor 4 isoform a [Hom...
ZNF384                0.011   nuclear matrix transcription factor 4 isoform d [Ho...
THAP11                0.011   THAP domain containing 11 
ATN1                  0.011   atrophin-1 
ATN1                  0.011   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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